Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   ACGHT2_RS05150 Genome accession   NZ_AP031455
Coordinates   971072..972808 (+) Length   578 a.a.
NCBI ID   WP_003064652.1    Uniprot ID   E0PDH5
Organism   Streptococcus pasteurianus strain k46-0107-A9     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 966072..977808
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACGHT2_RS05130 (K460107A9_09290) glyA 966432..967682 (+) 1251 WP_058692872.1 serine hydroxymethyltransferase -
  ACGHT2_RS05135 (K460107A9_09300) - 967727..968704 (+) 978 WP_003064647.1 nucleoid-associated protein -
  ACGHT2_RS05140 (K460107A9_09310) - 968704..969306 (+) 603 WP_003064649.1 lysozyme family protein -
  ACGHT2_RS05145 (K460107A9_09320) - 969346..971070 (+) 1725 WP_041974015.1 ABC transporter ATP-binding protein -
  ACGHT2_RS05150 (K460107A9_09330) rcrQ 971072..972808 (+) 1737 WP_003064652.1 ABC transporter ATP-binding protein Regulator
  ACGHT2_RS05155 (K460107A9_09340) - 972947..974401 (-) 1455 WP_013851794.1 alpha-amylase -
  ACGHT2_RS05160 - 974635..975243 (-) 609 WP_003064655.1 TVP38/TMEM64 family protein -
  ACGHT2_RS05165 (K460107A9_09360) - 975895..976728 (+) 834 WP_270619711.1 PRD domain-containing protein -
  ACGHT2_RS05170 (K460107A9_09370) - 976752..977075 (+) 324 WP_013851795.1 PTS lactose/cellobiose transporter subunit IIA -

Sequence

Protein


Download         Length: 578 a.a.        Molecular weight: 63870.76 Da        Isoelectric Point: 5.6689

>NTDB_id=97937 ACGHT2_RS05150 WP_003064652.1 971072..972808(+) (rcrQ) [Streptococcus pasteurianus strain k46-0107-A9]
MKAKNQNHTSRRLFQDLLSQKGLVLGATLGTIAQVALTVYLPILIGNAVDVVLSPKSISLIVPIVAKMIVVVALNTLVQW
VNPLIYNRLTFGYIYTLRQKVMEKLNQMPISYLDKKSSGDLVSRVTTDAEQLSNGLLMVFNQFFIGILTIIITIVTMADI
DLLMLGLVLILTPLSLFLARFIAQKSYHLYQNQTKSRGQQTQYIEEMIRQESLLHTFNAQDMAIDTFTTINDTYADYSQG
AIFYSSAVNPSTRFINSLIYALLAGVGALRIMSGAFTVGQLTTFLNYVNQYTKPFNDISSVLSELQSAIACAERLYAILD
EENEPLPVKAQLNADSIQGQIEFKDVSFGYTSQNTLINHLNLSIPAASKVAIVGPTGAGKSTLINLLMRFYEVNSGAIYL
DGVSMADYSVSELRQQIGMVLQETWLKVGTIHDNIAYGNPDATREEVIAAAKAANADFFIRQLPNGYDTYLADAGASLSQ
GQRQLLTIARIFVKLPKILILDEATSSIDTRTEVLIQEAFEKLMQGRTSFIIAHRLSTIQSADFILVMVDGDIVEHGTHD
DLMAKQGVYYQMQTAQAG

Nucleotide


Download         Length: 1737 bp        

>NTDB_id=97937 ACGHT2_RS05150 WP_003064652.1 971072..972808(+) (rcrQ) [Streptococcus pasteurianus strain k46-0107-A9]
ATGAAGGCAAAAAATCAAAATCATACTAGCCGCCGTTTGTTCCAAGATCTTTTATCACAAAAAGGACTTGTTCTTGGTGC
CACACTTGGAACGATTGCGCAAGTCGCTCTGACCGTTTATTTGCCTATTTTGATTGGGAATGCGGTGGACGTTGTCTTAT
CTCCGAAATCAATTAGTTTAATTGTGCCAATTGTAGCGAAAATGATTGTTGTTGTCGCTTTGAATACCTTGGTGCAATGG
GTGAATCCATTGATTTATAACCGTCTAACGTTTGGTTACATTTACACATTGCGTCAAAAAGTCATGGAAAAATTAAACCA
GATGCCGATTTCTTATCTTGACAAGAAAAGTTCAGGTGATTTGGTTAGTCGTGTGACAACTGATGCCGAACAATTGAGCA
ATGGTCTGTTAATGGTGTTCAATCAATTTTTCATTGGTATTCTAACGATTATCATTACCATTGTGACAATGGCTGATATT
GATTTGTTAATGCTTGGTTTGGTGCTAATTTTGACACCATTATCACTTTTCTTAGCACGTTTTATTGCTCAAAAGAGTTA
TCATCTTTATCAAAATCAAACAAAATCACGCGGGCAACAAACGCAGTATATTGAAGAAATGATTCGTCAAGAAAGTTTAC
TCCACACCTTCAATGCGCAAGATATGGCTATTGACACTTTCACGACGATTAATGATACTTATGCTGATTACTCACAAGGA
GCTATTTTCTATTCTTCAGCGGTTAATCCGTCAACGCGTTTCATTAATAGCTTGATTTATGCTCTCTTGGCAGGAGTAGG
GGCACTTCGGATTATGTCAGGCGCTTTTACAGTTGGGCAATTGACAACTTTCTTGAATTATGTCAATCAATACACCAAGC
CATTTAATGACATTTCATCCGTTTTGTCAGAATTGCAGAGCGCCATTGCCTGTGCAGAACGTCTCTACGCTATTTTAGAC
GAAGAAAATGAGCCTCTTCCAGTAAAAGCTCAGCTTAACGCGGATAGTATCCAAGGACAAATTGAATTCAAAGATGTGTC
GTTTGGTTATACTAGCCAAAATACCTTGATTAACCACCTTAATTTATCAATCCCAGCGGCTTCAAAAGTGGCTATCGTTG
GACCAACGGGGGCAGGAAAATCAACTTTAATCAATCTTTTAATGCGTTTTTATGAAGTCAATAGCGGAGCTATTTATTTG
GATGGCGTTTCTATGGCAGATTATTCTGTATCAGAATTGCGCCAACAAATCGGTATGGTATTGCAAGAAACGTGGCTGAA
AGTTGGAACGATTCACGATAATATTGCATATGGAAATCCTGATGCTACACGCGAAGAAGTCATTGCTGCCGCAAAAGCAG
CCAATGCTGATTTCTTTATTCGTCAGTTGCCAAATGGTTACGATACTTATCTGGCTGATGCAGGAGCGTCATTGTCGCAA
GGACAACGTCAGCTGTTAACGATTGCTCGAATTTTTGTCAAACTACCAAAAATCCTAATTCTCGATGAAGCAACTTCATC
TATCGATACTCGGACAGAAGTGTTGATTCAAGAAGCTTTTGAAAAATTAATGCAAGGAAGGACAAGTTTTATCATTGCAC
ACCGCTTGTCAACAATTCAATCAGCTGATTTTATTTTAGTCATGGTAGATGGTGACATTGTTGAACATGGTACGCATGAC
GATTTAATGGCAAAACAAGGCGTTTATTACCAAATGCAAACAGCCCAAGCAGGGTAG

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(27-294)

ABC transporter (ABC_tran)

(358-506)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB E0PDH5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

38.272

98.097

0.375

Multiple sequence alignment