Detailed information NTG0979250

Bioinformatically predicted

Overview

• Name: codY
• Type: Regulator
• Locus tag: ACLQ7P_RS13540
• Genome accession: NZ_CP181322
• Coordinates: 2502120..2502899 (-)
• Length: 259 a.a.
• NCBI ID: WP_003220850.1
• Uniprot ID: G4NSM6
• Organism: Bacillus subtilis subsp. subtilis strain JCK-1398
• Function: repression of comK (predicted from homology) Competence regulation

Genomic Context

Location: 2497120..2507899

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLQ7P_RS13510 (ACLQ7P_13510)	fliH	2497192..2497944 (-)	753	WP_172843761.1	flagellar assembly protein FliH	-
ACLQ7P_RS13515 (ACLQ7P_13515)	fliG	2497937..2498899 (-)	963	WP_416247043.1	flagellar motor switch protein FliG	-
ACLQ7P_RS13520 (ACLQ7P_13520)	fliF	2498912..2500522 (-)	1611	WP_072557157.1	flagellar basal-body MS-ring/collar protein FliF	-
ACLQ7P_RS13525 (ACLQ7P_13525)	fliE	2500568..2500888 (-)	321	WP_003238544.1	flagellar hook-basal body complex protein FliE	-
ACLQ7P_RS13530 (ACLQ7P_13530)	flgC	2500899..2501351 (-)	453	WP_416247655.1	flagellar basal body rod protein FlgC	-
ACLQ7P_RS13535 (ACLQ7P_13535)	flgB	2501351..2501740 (-)	390	WP_041335963.1	flagellar basal body rod protein FlgB	-
ACLQ7P_RS13540 (ACLQ7P_13540)	codY	2502120..2502899 (-)	780	WP_003220850.1	GTP-sensing pleiotropic transcriptional regulator CodY	Regulator
ACLQ7P_RS13545 (ACLQ7P_13545)	hslU	2502939..2504342 (-)	1404	WP_003245556.1	HslU--HslV peptidase ATPase subunit	-
ACLQ7P_RS13550 (ACLQ7P_13550)	clpQ	2504359..2504904 (-)	546	WP_003238555.1	ATP-dependent protease subunit ClpQ	-
ACLQ7P_RS13555 (ACLQ7P_13555)	xerC	2504917..2505831 (-)	915	WP_003231988.1	tyrosine recombinase XerC	-
ACLQ7P_RS13560 (ACLQ7P_13560)	trmFO	2505899..2507206 (-)	1308	WP_416247044.1	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	-

Sequence

Protein

• Length: 259 a.a.
• Molecular weight: 29013.22 Da
• Isoelectric Point: 4.6514

>NTDB_id=979250 ACLQ7P_RS13540 WP_003220850.1 2502120..2502899(-) (codY) [Bacillus subtilis subsp. subtilis strain JCK-1398]
MALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIENDRMKKMLEDRQFPEEYTKNLF
NVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGGERLGTLILSRLQDQFNDDDLILAEYGATVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNNKFLIELENLKSH

Nucleotide

• Length: 780 bp

>NTDB_id=979250 ACLQ7P_RS13540 WP_003220850.1 2502120..2502899(-) (codY) [Bacillus subtilis subsp. subtilis strain JCK-1398]
ATGGCTTTATTACAAAAAACAAGAATTATTAACTCCATGCTGCAAGCTGCGGCAGGGAAACCGGTAAACTTCAAGGAAAT
GGCGGAGACGCTGCGGGATGTAATTGATTCCAATATTTTCGTTGTAAGCCGCAGAGGGAAACTCCTTGGGTATTCTATTA
ACCAGCAAATTGAAAATGATCGTATGAAAAAAATGCTTGAGGATCGTCAATTCCCTGAAGAATATACGAAAAATCTGTTT
AATGTCCCTGAAACATCTTCTAACTTGGATATTAATAGTGAATATACTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCA
AGCTGGTTTAACAACAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTCATTCTTTCACGTTTACAAGATC
AATTCAATGACGATGACTTAATTCTAGCTGAATACGGCGCAACAGTTGTCGGAATGGAAATCCTAAGAGAAAAAGCAGAA
GAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAGCAAT
TGAGCACATTTTTGAGGAGCTTGACGGAAACGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCC
GTTCTGTTATTGTGAACGCACTCAGAAAGCTGGAGAGCGCCGGTGTTATCGAGTCTAGATCATTAGGAATGAAAGGTACT
TATATCAAGGTACTAAACAACAAATTCCTAATTGAATTAGAAAATCTAAAATCTCATTAA

Domains

Predicted by InterProScan.

• CodY helix-turn-helix domain (HTH_CodY) (198-255)

• CodY GAF-like domain (CodY) (3-178)

3D structure

• AlphaFold DB: G4NSM6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
codY	Bacillus subtilis subsp. subtilis str. 168	100	100	1
codY	Lactococcus lactis subsp. lactis strain DGCC12653	47.451	98.456	0.467