Detailed information NTG0979022

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: AAEO79_RS03895
• Genome accession: NZ_CP151540
• Coordinates: 792672..795071 (+)
• Length: 799 a.a.
• NCBI ID: WP_379946630.1
• Uniprot ID: -
• Organism: Enterococcus devriesei strain Ed-CK-24
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 787672..800071

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAEO79_RS03870 (AAEO79_03860)	-	787940..789351 (-)	1412	Protein_758	IS3 family transposase	-
AAEO79_RS03875 (AAEO79_03865)	-	789447..790082 (-)	636	WP_071863197.1	copper homeostasis protein CutC	-
AAEO79_RS03880 (AAEO79_03870)	-	790217..791044 (+)	828	WP_379946629.1	methyltransferase domain-containing protein	-
AAEO79_RS03885 (AAEO79_03875)	trmL	791437..791943 (+)	507	WP_216429664.1	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	-
AAEO79_RS03890 (AAEO79_03880)	-	792001..792657 (+)	657	WP_071863200.1	histidine phosphatase family protein	-
AAEO79_RS03895 (AAEO79_03885)	recD2	792672..795071 (+)	2400	WP_379946630.1	ATP-dependent RecD-like DNA helicase	Machinery gene
AAEO79_RS03900 (AAEO79_03890)	-	795099..796088 (-)	990	WP_379946631.1	diacylglycerol/lipid kinase family protein	-
AAEO79_RS03905 (AAEO79_03895)	-	796253..796552 (-)	300	WP_379946632.1	hypothetical protein	-
AAEO79_RS03910 (AAEO79_03900)	-	796750..797250 (+)	501	WP_071863204.1	QueT transporter family protein	-
AAEO79_RS03915 (AAEO79_03905)	cbpA	797290..797931 (-)	642	WP_071863205.1	cyclic di-AMP binding protein CbpA	-
AAEO79_RS03920 (AAEO79_03910)	rpmG	798175..798327 (+)	153	WP_071863206.1	50S ribosomal protein L33	-
AAEO79_RS03925 (AAEO79_03915)	secE	798340..798510 (+)	171	WP_071863207.1	preprotein translocase subunit SecE	-
AAEO79_RS03930 (AAEO79_03920)	nusG	798607..799149 (+)	543	WP_071863235.1	transcription termination/antitermination protein NusG	-

Sequence

Protein

• Length: 799 a.a.
• Molecular weight: 89717.92 Da
• Isoelectric Point: 4.7910

>NTDB_id=979022 AAEO79_RS03895 WP_379946630.1 792672..795071(+) (recD2) [Enterococcus devriesei strain Ed-CK-24]
MSEEQLYIVGTLKAIFFQNPSNFYKVLLVKVSETNSDYLEQEIVVTGSFGDVQEDEEYRFLGHFVEHPRYGKQFLVESYE
QAHPTSANGLINYLSSEKFPGIGKKTAEKIIEVLGEEAIDEIIENPAVLARIPNLNAKKQKVVVETLRQNHGMEKIIMGL
GRYGFGSQLSFAIFQTYRNEALDVIAENPYQLVEDIEGIGFKKADSLAEQLGIAADSPQRIRAAIFHQVNEDANQSGDTY
VEAQQLLTEVLQLLETTRPVEIAPDQIATMIIQLVEEEKIQQEATKIYENTLFYSEWGIASSIERLLARKKEINYPQKTV
DKKLRIIEKQLKITYGDSQDQAIKEAIRSPLFILTGGPGTGKTTVINGIVKLFAELNELSLDPRDYTNAIFPILLAAPTG
RAAKRMNETTGLPASTIHRLLGLNANDETPDIEAKELDGGLLIVDEMSMVDTWLANTLLKAIPDNMQVIFVGDKDQLPSV
GPGQVFHDLLQITEIPKMELTDIYRQGDGSSIIPLAHEIKDGKLPQDFRQNQKDRSFIACHAFQMEEVVKQIVERAKKKG
YTAQDVQVLAPMYRGPAGIDAINKMMQEIFNPNDGRKKEVQWNDVVYRIGDKVLQLVNNPELNVFNGDMGMIVGIIPAKE
SEDKVDELVIQFDSNEVSYKRSEWNKIKLSYCCSIHKAQGSEFKMVLLPMVKQYSRMLQRNLLYTAVTRSKDLLILLGEE
EAFQACVNKESAVRKTTLIERITKGTADAPEKLKEAPFEVLEKPVSETKGPTILTPQIITAQTIDPMIGMEGMTPAMFM

Nucleotide

• Length: 2400 bp

>NTDB_id=979022 AAEO79_RS03895 WP_379946630.1 792672..795071(+) (recD2) [Enterococcus devriesei strain Ed-CK-24]
ATGTCGGAAGAACAGTTATACATCGTAGGCACGCTAAAAGCCATCTTTTTTCAAAACCCCAGCAATTTTTATAAAGTTCT
GCTGGTAAAAGTCAGCGAGACCAACAGCGATTATCTCGAACAGGAAATCGTCGTTACGGGCAGCTTTGGCGATGTGCAAG
AAGATGAAGAATATCGCTTCTTGGGGCATTTTGTTGAACATCCTCGCTATGGAAAACAATTTTTGGTGGAAAGCTACGAA
CAGGCGCATCCAACTTCGGCTAATGGGTTGATCAATTATTTATCTAGCGAAAAATTTCCCGGGATTGGTAAAAAGACCGC
TGAAAAAATCATTGAGGTATTAGGCGAAGAAGCAATCGATGAGATCATCGAAAATCCAGCGGTGCTGGCTCGGATTCCCA
ATCTGAATGCCAAGAAACAGAAGGTCGTCGTCGAAACCCTGCGGCAAAATCACGGAATGGAAAAAATTATCATGGGTTTA
GGGCGCTATGGCTTTGGCAGTCAGCTCTCCTTTGCGATTTTTCAAACCTATCGCAATGAAGCTTTGGATGTGATCGCGGA
AAATCCGTATCAGCTAGTGGAGGATATCGAAGGAATCGGCTTTAAAAAAGCGGACAGCTTGGCAGAGCAGTTGGGTATCG
CGGCGGATAGTCCACAGCGGATTCGGGCGGCGATTTTTCATCAAGTTAATGAAGATGCCAACCAAAGTGGAGACACTTAT
GTGGAAGCTCAGCAATTATTAACCGAGGTCTTGCAATTATTAGAAACCACGCGACCTGTTGAGATCGCTCCCGATCAAAT
TGCGACGATGATTATTCAGCTAGTCGAAGAAGAAAAAATTCAGCAAGAAGCAACCAAAATCTATGAAAACACGTTGTTTT
ACAGTGAGTGGGGAATTGCTTCTTCCATCGAACGGTTGTTAGCCCGTAAAAAGGAAATTAATTATCCGCAAAAGACGGTG
GATAAAAAATTGCGAATCATTGAAAAGCAATTAAAGATTACTTATGGTGACTCACAAGATCAAGCGATCAAAGAAGCGAT
TCGTTCACCGCTATTTATCCTAACGGGTGGCCCCGGAACCGGGAAAACCACGGTGATCAACGGGATCGTTAAATTATTCG
CTGAGTTGAATGAGTTATCTTTAGACCCAAGAGACTATACCAACGCGATCTTTCCGATTTTATTAGCGGCTCCCACCGGA
CGAGCGGCCAAACGGATGAATGAAACTACCGGTCTGCCTGCCAGTACGATCCACCGATTACTAGGCTTGAATGCCAACGA
TGAGACACCTGATATCGAAGCCAAAGAATTAGATGGTGGCTTGTTAATCGTAGACGAGATGTCGATGGTGGATACATGGC
TTGCAAATACCTTGTTAAAAGCAATCCCTGATAATATGCAGGTCATTTTTGTAGGAGACAAGGATCAGTTACCTTCCGTG
GGCCCGGGACAAGTTTTTCATGATCTGCTGCAGATTACTGAGATTCCTAAAATGGAACTGACGGATATTTATCGTCAAGG
GGATGGCTCTTCGATTATTCCGCTGGCGCATGAAATCAAAGATGGCAAGCTGCCGCAAGATTTCAGACAAAATCAAAAGG
ATCGCTCTTTCATTGCTTGTCACGCTTTTCAAATGGAAGAAGTGGTTAAGCAGATCGTCGAGCGAGCAAAGAAGAAAGGT
TACACTGCCCAAGATGTTCAAGTCTTAGCACCAATGTATCGCGGACCAGCAGGGATCGATGCGATCAATAAGATGATGCA
GGAAATTTTCAATCCTAACGATGGACGTAAAAAAGAAGTTCAGTGGAACGATGTTGTTTATCGGATCGGTGACAAAGTTT
TACAGTTAGTCAACAATCCGGAGCTGAATGTGTTCAATGGCGATATGGGGATGATCGTAGGGATCATTCCAGCGAAGGAA
TCGGAAGATAAAGTCGATGAATTAGTGATCCAATTTGACAGCAATGAAGTCAGCTATAAACGCTCCGAATGGAACAAGAT
CAAACTCTCTTACTGCTGTTCGATCCATAAAGCGCAAGGCAGCGAGTTCAAAATGGTACTGCTGCCGATGGTGAAGCAGT
ATTCTCGCATGTTGCAACGAAATTTATTGTATACGGCGGTGACTCGTAGCAAGGATTTGTTGATCTTGTTAGGTGAAGAG
GAAGCCTTTCAAGCTTGTGTCAATAAAGAATCGGCCGTACGAAAGACGACTTTGATTGAACGAATCACTAAAGGGACTGC
CGACGCACCGGAAAAACTGAAGGAAGCACCTTTTGAAGTATTAGAAAAGCCCGTATCTGAAACCAAAGGCCCGACCATTT
TGACACCTCAAATAATTACCGCGCAAACCATCGATCCAATGATTGGAATGGAAGGTATGACACCAGCGATGTTTATGTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (150-240)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (670-717)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (582-652)

• AAA domain (AAA_30) (335-541)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	47.643	100	0.481