Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   AAEO79_RS01485 Genome accession   NZ_CP151540
Coordinates   313471..315312 (+) Length   613 a.a.
NCBI ID   WP_071861590.1    Uniprot ID   A0A1L8SWL0
Organism   Enterococcus devriesei strain Ed-CK-24     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 308471..320312
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAEO79_RS01470 (AAEO79_01470) - 308845..310206 (+) 1362 WP_379946345.1 CHAP domain-containing protein -
  AAEO79_RS01475 (AAEO79_01475) - 310628..311074 (+) 447 WP_071861592.1 MarR family winged helix-turn-helix transcriptional regulator -
  AAEO79_RS01480 (AAEO79_01480) - 311074..313455 (+) 2382 WP_379946346.1 ABC transporter ATP-binding protein -
  AAEO79_RS01485 (AAEO79_01485) rcrQ 313471..315312 (+) 1842 WP_071861590.1 ABC transporter ATP-binding protein Regulator
  AAEO79_RS01490 (AAEO79_01490) - 315528..316943 (-) 1416 WP_379946347.1 MFS transporter -
  AAEO79_RS01495 (AAEO79_01495) dhaL 317104..317703 (-) 600 WP_379946348.1 dihydroxyacetone kinase subunit DhaL -
  AAEO79_RS01500 (AAEO79_01500) dhaK 317727..318710 (-) 984 WP_313630714.1 dihydroxyacetone kinase subunit DhaK -
  AAEO79_RS01505 (AAEO79_01505) dhaM 318712..319110 (-) 399 WP_379946350.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -

Sequence

Protein


Download         Length: 613 a.a.        Molecular weight: 68146.81 Da        Isoelectric Point: 5.9493

>NTDB_id=979013 AAEO79_RS01485 WP_071861590.1 313471..315312(+) (rcrQ) [Enterococcus devriesei strain Ed-CK-24]
MAEQKQNRPRGGGPGHMSAPVEKAKDFKGTLKKLVSYLGAYKIAVFFVMIFAIASTIFNIWGPKILSKAITELFNGLIKK
YQGTGDINFDKIGGILLFMLGLYVVASLFGIIQGWIMSTISQKITYRMRKEISEKIDRMPMNYFESRTTGEVLSRITNDV
DTLGQSLNQSLTQLITSTFTIIGVIVMMLSISVKMTGVAILIVPISLILILIVVKNSQKYFKTQQEYLGVINGKVEETIG
GYTIVRLFNDEENSLKEFKEQNEVLFKSAWKSQFLSGLMQPIMNFVGNLGYVGVAIVGGFMAYNGTITVGDIQAFIQYVR
NLTQPIAQLAQVSNMLQSMAAAAERVFEFLAEDEEDQMAENPVQLDKAKGMVDFEHVQFGYTPDKIVIQDFTSHVDPGQT
VAIVGPTGAGKTTMVKLLMRFYDVNSGAIKIDGHNIKDFNRADLRKNIGMVLQDTWLFKGTIMDNLRYGRLDATDEEVYA
AAKAAHVDHFIKTLPGGYEMELNEESSNISQGQKQLLTIARAILADKPILILDEATSSVDTRTEGLIQEAMNNLMKGRTS
FVIAHRLSTIKDADKILYMQGGDIKEQGSHEELLAQNGLYASLYNSQFEELAE

Nucleotide


Download         Length: 1842 bp        

>NTDB_id=979013 AAEO79_RS01485 WP_071861590.1 313471..315312(+) (rcrQ) [Enterococcus devriesei strain Ed-CK-24]
ATGGCAGAACAAAAACAAAATCGCCCTCGTGGTGGCGGTCCTGGACATATGTCTGCGCCAGTGGAAAAAGCCAAAGACTT
CAAAGGTACGCTGAAAAAATTAGTCTCGTATCTTGGGGCGTATAAAATCGCGGTGTTCTTTGTAATGATCTTCGCGATCG
CCTCAACAATTTTCAATATTTGGGGTCCAAAAATCTTATCAAAAGCAATTACTGAATTATTTAACGGTTTAATCAAAAAA
TATCAAGGTACCGGCGATATTAATTTTGATAAAATCGGTGGCATTCTTTTATTTATGCTTGGCCTATATGTGGTGGCTTC
CTTATTCGGAATCATCCAAGGCTGGATCATGTCAACGATTTCCCAAAAGATCACGTATCGGATGCGGAAAGAAATTTCTG
AAAAAATCGATCGGATGCCAATGAATTATTTTGAAAGCCGGACAACCGGGGAAGTTCTTTCACGTATCACGAATGACGTG
GATACATTAGGACAATCACTGAACCAGAGTTTGACGCAGTTGATCACTTCCACCTTCACGATCATCGGAGTTATCGTAAT
GATGCTTTCAATTTCGGTGAAAATGACGGGTGTTGCGATCTTGATCGTCCCTATTTCATTAATTTTGATCTTGATCGTTG
TGAAAAATTCGCAAAAATATTTCAAAACCCAACAAGAATATTTAGGGGTTATCAACGGGAAGGTTGAAGAAACCATCGGT
GGTTACACGATCGTTCGTTTGTTCAATGATGAAGAAAACTCGTTGAAGGAATTCAAAGAACAAAATGAAGTGCTATTCAA
ATCTGCTTGGAAGTCCCAATTTCTATCTGGTTTGATGCAGCCGATCATGAACTTTGTCGGAAACTTAGGTTATGTGGGTG
TAGCGATCGTCGGTGGATTCATGGCTTATAATGGAACAATCACAGTTGGTGATATCCAAGCCTTTATCCAATACGTTCGT
AACTTAACGCAACCAATCGCGCAATTAGCACAAGTATCGAATATGTTGCAATCAATGGCTGCCGCAGCTGAACGGGTCTT
TGAATTCTTAGCCGAAGACGAAGAAGATCAAATGGCTGAGAATCCAGTGCAATTGGATAAAGCAAAAGGCATGGTAGACT
TTGAGCACGTACAGTTTGGTTACACACCAGACAAGATCGTTATCCAAGACTTTACTTCTCATGTCGATCCTGGCCAAACA
GTTGCAATCGTTGGACCGACTGGTGCAGGTAAAACAACGATGGTCAAATTATTGATGCGTTTTTACGATGTCAATTCCGG
CGCAATTAAAATCGATGGGCACAATATCAAAGACTTTAATCGTGCAGATCTACGGAAAAACATTGGAATGGTGTTACAAG
ATACTTGGTTGTTCAAAGGAACGATCATGGACAATCTACGGTATGGGCGTTTAGACGCGACGGATGAAGAAGTTTATGCC
GCTGCCAAAGCTGCTCACGTGGATCACTTTATTAAGACCTTACCTGGTGGTTATGAGATGGAATTGAATGAAGAATCTTC
AAACATCTCACAAGGGCAAAAACAATTGTTGACCATTGCTCGTGCGATCTTAGCCGACAAGCCGATCTTGATCTTAGATG
AAGCCACTTCATCAGTTGATACTCGGACAGAAGGCTTGATCCAAGAAGCGATGAACAACTTGATGAAGGGCCGCACGTCC
TTTGTTATCGCTCACCGTCTATCAACCATTAAAGACGCTGACAAGATTCTTTACATGCAAGGTGGAGACATCAAAGAACA
AGGTAGCCACGAAGAACTATTGGCTCAAAACGGACTTTATGCTTCTCTTTACAATTCACAATTTGAAGAATTAGCGGAAT
AA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(45-325)

ABC transporter (ABC_tran)

(390-537)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1L8SWL0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

51.286

95.106

0.488

Multiple sequence alignment