Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   ACM6AR_RS03150 Genome accession   NZ_CP181164
Coordinates   658639..659313 (+) Length   224 a.a.
NCBI ID   WP_001166500.1    Uniprot ID   Q99VW2
Organism   Staphylococcus aureus strain AG21-0620     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 653639..664313
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM6AR_RS03125 (ACM6AR_03125) - 653854..654921 (+) 1068 WP_000980137.1 membrane protein -
  ACM6AR_RS03130 (ACM6AR_03130) - 655072..656115 (+) 1044 WP_001030771.1 alpha/beta hydrolase -
  ACM6AR_RS03135 (ACM6AR_03135) - 656444..656872 (+) 429 WP_416197057.1 hypothetical protein -
  ACM6AR_RS03140 (ACM6AR_03140) - 657081..657587 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  ACM6AR_RS03145 (ACM6AR_03145) graX 657700..658623 (+) 924 WP_000802955.1 auxiliary protein GraX/ApsX -
  ACM6AR_RS03150 (ACM6AR_03150) braR 658639..659313 (+) 675 WP_001166500.1 response regulator transcription factor GraR/ApsR Regulator
  ACM6AR_RS03155 (ACM6AR_03155) graS 659306..660346 (+) 1041 WP_001061247.1 histidine kinase GraS/ApsS -
  ACM6AR_RS03160 (ACM6AR_03160) vraF 660490..661251 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  ACM6AR_RS03165 (ACM6AR_03165) vraG 661241..663130 (+) 1890 WP_000143612.1 ABC transporter permease VraG -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 26065.87 Da        Isoelectric Point: 4.3563

>NTDB_id=979013 ACM6AR_RS03150 WP_001166500.1 658639..659313(+) (braR) [Staphylococcus aureus strain AG21-0620]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=979013 ACM6AR_RS03150 WP_001166500.1 658639..659313(+) (braR) [Staphylococcus aureus strain AG21-0620]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCGTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATAAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q99VW2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397


Multiple sequence alignment