Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   WMY90_RS07120 Genome accession   NZ_CP150875
Coordinates   1381126..1382361 (-) Length   411 a.a.
NCBI ID   WP_341276267.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain TCI125     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1376126..1387361
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WMY90_RS07100 (WMY90_07100) - 1377156..1377347 (-) 192 WP_002886272.1 DUF951 domain-containing protein -
  WMY90_RS07105 (WMY90_07105) dnaN 1377398..1378534 (-) 1137 WP_002948586.1 DNA polymerase III subunit beta -
  WMY90_RS07110 (WMY90_07110) dnaA 1378689..1380053 (-) 1365 WP_002948584.1 chromosomal replication initiator protein DnaA -
  WMY90_RS07115 (WMY90_07115) spo0J 1380293..1381060 (-) 768 WP_002948582.1 ParB/RepB/Spo0J family partition protein Regulator
  WMY90_RS07120 (WMY90_07120) htrA 1381126..1382361 (-) 1236 WP_341276267.1 trypsin-like peptidase domain-containing protein Regulator
  WMY90_RS07125 (WMY90_07125) rlmH 1382566..1383045 (+) 480 WP_180473206.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  WMY90_RS07130 (WMY90_07130) - 1383061..1383744 (+) 684 WP_180473154.1 YoaK family protein -
  WMY90_RS07150 (WMY90_07150) - 1384288..1386894 (-) 2607 WP_002946816.1 YfhO family protein -

Sequence


Protein


Download         Length: 411 a.a.        Molecular weight: 42902.22 Da        Isoelectric Point: 4.7061

>NTDB_id=973239 WMY90_RS07120 WP_341276267.1 1381126..1382361(-) (htrA) [Streptococcus thermophilus strain TCI125]
MKKFNWKKIVAPIAMLIIGLLGGLLGAFILLTAAGVSFTNTTDNGVKTAKTVYTNITDTTKAVKKVQNAVVSVINYQEGS
SSDSLNDLYGRIFGGGDSSDSSQENSKDSDGLQVAGEGSGVIYKKDGKEAYIVTNNHVVDGAKKLEIMLSDGSKITGELV
GKDTYSDLAVVKVSSDKITTVAEFADSNSLTVGEKAIAIGSPLGTEYANSVTEGIVSSLSRTITMQNDNGETVSTNAIQT
DAAINPGNSGGALVNIEGQVIGINSSKISSMSAVAGSAVEGMGFAIPSNDVVEIINQLEKDGKVTRPALGISIADLNSLS
SSATSKLDLPDEVKSGVVVGSVQKGMPADGKLQEYDVITEIDGKKISSKTDIQTNLYSHSIGDTIKVTFYRGKDKKTVDL
KLTKSTEDISD

Nucleotide


Download         Length: 1236 bp        

>NTDB_id=973239 WMY90_RS07120 WP_341276267.1 1381126..1382361(-) (htrA) [Streptococcus thermophilus strain TCI125]
ATGAAAAAATTTAACTGGAAGAAAATAGTCGCGCCAATTGCAATGCTAATTATTGGCTTACTAGGTGGTTTACTTGGTGC
CTTTATCCTACTAACAGCAGCCGGGGTATCTTTTACCAATACAACAGATAATGGAGTAAAAACGGCTAAGACCGTCTACA
CCAATATAACAGATACAACTAAGGCTGTTAAAAAAGTACAAAATGCCGTTGTTTCTGTCATCAATTATCAAGAAGGTTCA
TCTTCAGATTCACTAAATGACCTTTATGGCCGTATCTTTGGCGGAGGGGACAGTTCTGATTCTAGCCAAGAAAATTCAAA
AGATTCAGATGGTCTACAGGTCGCTGGTGAAGGTTCTGGAGTCATCTATAAAAAAGATGGCAAAGAAGCCTACATCGTAA
CCAATAACCACGTTGTCGATGGGGCTAAAAAACTTGAAATCATGCTTTCGGATGGTTCGAAAATTACTGGTGAACTTGTT
GGTAAAGACACTTACTCTGACCTAGCAGTTGTCAAAGTATCTTCAGATAAAATAACAACTGTTGCAGAATTTGCAGACTC
AAACTCCCTTACTGTTGGTGAAAAAGCAATTGCTATCGGTAGCCCACTTGGTACCGAATACGCCAACTCAGTAACAGAAG
GAATCGTTTCTAGCCTTAGCCGTACTATAACGATGCAAAACGATAATGGTGAAACTGTATCAACAAACGCTATCCAAACA
GATGCAGCCATTAACCCTGGTAACTCTGGTGGTGCCCTAGTCAATATTGAAGGACAAGTTATCGGTATTAATTCAAGTAA
AATTTCATCAATGTCTGCAGTCGCTGGTAGTGCTGTTGAAGGTATGGGGTTTGCCATTCCATCAAACGATGTTGTTGAAA
TCATCAATCAATTAGAAAAAGATGGTAAAGTTACACGACCAGCACTAGGGATCTCAATAGCAGATCTTAATAGCCTTTCT
AGCAGCGCAACTTCTAAATTAGATTTACCAGATGAGGTCAAATCCGGTGTTGTTGTCGGTAGTGTTCAGAAAGGTATGCC
AGCTGACGGTAAACTTCAAGAATATGATGTTATCACTGAGATTGATGGTAAGAAAATCAGCTCAAAAACTGATATTCAAA
CCAATCTTTACAGCCATAGTATTGGAGATACTATCAAGGTAACCTTCTATCGTGGTAAAGATAAGAAAACTGTAGATCTT
AAATTAACAAAATCTACAGAAGACATATCTGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

61.596

97.567

0.601

  htrA Streptococcus gordonii str. Challis substr. CH1

57.282

100

0.574

  htrA Streptococcus mitis NCTC 12261

54.034

99.513

0.538

  htrA Streptococcus pneumoniae TIGR4

53.79

99.513

0.535

  htrA Streptococcus pneumoniae D39

53.79

99.513

0.535

  htrA Streptococcus pneumoniae Rx1

53.79

99.513

0.535

  htrA Streptococcus pneumoniae R6

53.79

99.513

0.535


Multiple sequence alignment