Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   WMY90_RS07115 Genome accession   NZ_CP150875
Coordinates   1380293..1381060 (-) Length   255 a.a.
NCBI ID   WP_002948582.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain TCI125     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1375293..1386060
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WMY90_RS07095 (WMY90_07095) ychF 1375828..1376943 (-) 1116 WP_002948588.1 redox-regulated ATPase YchF -
  WMY90_RS07100 (WMY90_07100) - 1377156..1377347 (-) 192 WP_002886272.1 DUF951 domain-containing protein -
  WMY90_RS07105 (WMY90_07105) dnaN 1377398..1378534 (-) 1137 WP_002948586.1 DNA polymerase III subunit beta -
  WMY90_RS07110 (WMY90_07110) dnaA 1378689..1380053 (-) 1365 WP_002948584.1 chromosomal replication initiator protein DnaA -
  WMY90_RS07115 (WMY90_07115) spo0J 1380293..1381060 (-) 768 WP_002948582.1 ParB/RepB/Spo0J family partition protein Regulator
  WMY90_RS07120 (WMY90_07120) htrA 1381126..1382361 (-) 1236 WP_341276267.1 trypsin-like peptidase domain-containing protein Regulator
  WMY90_RS07125 (WMY90_07125) rlmH 1382566..1383045 (+) 480 WP_180473206.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  WMY90_RS07130 (WMY90_07130) - 1383061..1383744 (+) 684 WP_180473154.1 YoaK family protein -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29463.81 Da        Isoelectric Point: 9.6649

>NTDB_id=973238 WMY90_RS07115 WP_002948582.1 1380293..1381060(-) (spo0J) [Streptococcus thermophilus strain TCI125]
MSEQLKTLSISEIYPNPFQPRLKFSDEELVELSQSISENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVTDQESRKQAIIENLQRSNLNPIEEAKAYRNLIDELTYSHEELAKAMGKSRPYISNALRLLQLPREIQTSIENGSLSQG
HARALLAIEDSRKQLTIFQQVVTERWSVRTLEKKLQELPRKQKSKKDTHVKDKEKELERSLGVPITLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=973238 WMY90_RS07115 WP_002948582.1 1380293..1381060(-) (spo0J) [Streptococcus thermophilus strain TCI125]
ATGTCAGAACAACTCAAAACTTTATCTATTAGTGAAATTTACCCCAATCCTTTTCAACCTCGTCTAAAATTCTCCGATGA
AGAGTTAGTAGAACTAAGTCAATCAATATCAGAAAATGGTTTAATACAGCCAATTATTGTACGAAAATCTGACATTATTG
GTTATGAACTAATTGCTGGAGAAAGACGTTTACGAGCCTGTAAACGTTTAGGGATGACAGAAATCCCTGCAGTTGTAAAG
GAAGTTACAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATCTACAACGATCAAATCTCAATCCTATTGAAGAAGC
AAAGGCCTATCGTAATTTAATTGATGAGTTAACTTATAGTCACGAGGAGCTCGCTAAAGCTATGGGAAAATCTAGACCAT
ATATTAGTAACGCTCTTAGACTACTACAACTTCCGCGAGAGATACAAACGAGTATTGAAAACGGAAGTCTGAGTCAGGGA
CATGCTAGAGCACTCTTAGCTATTGAGGATTCTCGAAAGCAGTTAACCATCTTTCAACAGGTTGTGACTGAAAGATGGTC
TGTTCGTACTCTAGAAAAAAAACTTCAGGAACTTCCTAGAAAACAAAAATCTAAAAAAGATACCCATGTAAAAGATAAAG
AAAAAGAACTTGAAAGATCACTAGGTGTCCCTATAACTCTACGTTATCACAAAAATCACTCAGGAACGATTCAAATACAC
TTTTCGACAGAAGAAGATTTTAACAGAATTATCAACAAGCTTATCTAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(8-95)

HTH domain found in ParB protein (HTH_ParB)

(147-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

56.863

100

0.569

Multiple sequence alignment