Detailed information NTG0973217

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: WMY90_RS03490
• Genome accession: NZ_CP150875
• Coordinates: 678058..678939 (-)
• Length: 293 a.a.
• NCBI ID: WP_022096754.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain TCI125
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 673058..683939

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WMY90_RS03465 (WMY90_03465)	vicR	673762..674469 (-)	708	WP_011226084.1	response regulator YycF	Regulator
WMY90_RS03470 (WMY90_03470)	-	674996..675763 (+)	768	WP_022096757.1	amino acid ABC transporter ATP-binding protein	-
WMY90_RS03475 (WMY90_03475)	-	675775..676608 (+)	834	WP_022096756.1	transporter substrate-binding domain-containing protein	-
WMY90_RS03480 (WMY90_03480)	-	676626..677324 (+)	699	WP_022096755.1	amino acid ABC transporter permease	-
WMY90_RS03485 (WMY90_03485)	-	677336..677986 (+)	651	WP_341276295.1	amino acid ABC transporter permease	-
WMY90_RS03490 (WMY90_03490)	endA	678058..678939 (-)	882	WP_022096754.1	DNA/RNA non-specific endonuclease	Machinery gene
WMY90_RS03495 (WMY90_03495)	-	679001..679189 (-)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
WMY90_RS03500 (WMY90_03500)	murA	679191..680462 (-)	1272	WP_022096753.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
WMY90_RS03505 (WMY90_03505)	-	680532..680768 (-)	237	WP_002946959.1	DUF1146 family protein	-
WMY90_RS03510 (WMY90_03510)	galE	680956..681969 (-)	1014	WP_002946961.1	UDP-glucose 4-epimerase GalE	-
WMY90_RS03515 (WMY90_03515)	-	681984..682439 (-)	456	WP_341276296.1	DUF4832 domain-containing protein	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31813.61 Da
• Isoelectric Point: 10.1789

>NTDB_id=973217 WMY90_RS03490 WP_022096754.1 678058..678939(-) (endA) [Streptococcus thermophilus strain TCI125]
MAKRKTSLTNKQKRQLVTLIIAVLIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSINSQSTPQEQLAETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=973217 WMY90_RS03490 WP_022096754.1 678058..678939(-) (endA) [Streptococcus thermophilus strain TCI125]
ATGGCAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGTTTTGATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAATAAATAGTCAGTCTACACCACAAGAGCAGCTTGCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTGGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGATGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	70.635	86.007	0.608
endA	Streptococcus pneumoniae D39	70.635	86.007	0.608
endA	Streptococcus pneumoniae R6	70.635	86.007	0.608
endA	Streptococcus pneumoniae TIGR4	70.635	86.007	0.608