Detailed information NTG0972788

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: WNC56_RS12700
• Genome accession: NZ_CP150833
• Coordinates: 2481945..2484329 (-)
• Length: 794 a.a.
• NCBI ID: WP_024423121.1
• Uniprot ID: -
• Organism: Bacillus safensis strain DMB13
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2476945..2489329

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WNC56_RS12665 (WNC56_12655)	-	2477908..2478636 (+)	729	WP_024423116.1	amino acid ABC transporter ATP-binding protein	-
WNC56_RS12670 (WNC56_12660)	-	2478650..2479459 (+)	810	WP_024423117.1	transporter substrate-binding domain-containing protein	-
WNC56_RS12675 (WNC56_12665)	-	2479537..2480190 (+)	654	WP_024423118.1	amino acid ABC transporter permease	-
WNC56_RS12680 (WNC56_12670)	-	2480206..2480856 (+)	651	WP_024423119.1	amino acid ABC transporter permease	-
WNC56_RS12685 (WNC56_12675)	-	2480958..2481089 (-)	132	WP_003216198.1	YrzQ family protein	-
WNC56_RS12690 (WNC56_12680)	-	2481110..2481301 (-)	192	WP_003216308.1	hypothetical protein	-
WNC56_RS12695 (WNC56_12685)	-	2481315..2481833 (-)	519	WP_051170124.1	PRC-barrel domain-containing protein	-
WNC56_RS12700 (WNC56_12690)	recD2	2481945..2484329 (-)	2385	WP_024423121.1	ATP-dependent RecD-like DNA helicase	Machinery gene
WNC56_RS12705 (WNC56_12695)	-	2484349..2485002 (-)	654	WP_056767976.1	lipopolysaccharide assembly protein LapB	-
WNC56_RS12710 (WNC56_12700)	mnmA	2485062..2486180 (-)	1119	WP_024423123.1	tRNA 2-thiouridine(34) synthase MnmA	-
WNC56_RS12715 (WNC56_12705)	-	2486275..2487417 (-)	1143	WP_024423124.1	cysteine desulfurase family protein	-
WNC56_RS12720 (WNC56_12710)	cymR	2487436..2487855 (-)	420	WP_024423125.1	cysteine metabolism transcriptional regulator CymR	-
WNC56_RS12725 (WNC56_12715)	-	2488064..2489329 (+)	1266	WP_151040134.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 89073.59 Da
• Isoelectric Point: 5.2068

>NTDB_id=972788 WNC56_RS12700 WP_024423121.1 2481945..2484329(-) (recD2) [Bacillus safensis strain DMB13]
MQEHPDQMKLEDEPFLKGTIQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGQLGNQTLHKIMRDPAVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNDYKVTEMDVANQIIALGEGKEMIIEDDRCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEEQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASKAVPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIQCSADQMKEVI
EKVVSNAAQKGFSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLVQTEQIMDAELEALQKELPFSVHDANIGMEGITPFDFMHE

Nucleotide

• Length: 2385 bp

>NTDB_id=972788 WNC56_RS12700 WP_024423121.1 2481945..2484329(-) (recD2) [Bacillus safensis strain DMB13]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAGGACGAACCATTTTTAAAGGGGACCATTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAGGTAAAAGTCATTGAAACATCGGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCAGCACTTCATGAGGAGGAAACCTACACCTTTTATGGCAAAGTCACGAGCCATCCGAAATTTGGTGAA
CAGTTTCAGGCCACTCATTTTCAAAAGGAAGTACCGACAACGAAGCAAGGCATCATACATTATCTCTCAAGTGATTTATT
TGAAGGGATAGGGAAAAAGACGGCGGAAGAAATCGTGGGGCAGCTTGGCAATCAGACGCTTCATAAAATTATGCGTGACC
CAGCTGTTTTGTATGATGTACCGCGCTTATCAAAAAAGAAGGCGGATAAGCTGGCCGCAGCGCTTCAGGAGCATCAAGGG
CTGGAACAAATCATGATCAGCCTGAATCAGTATGGCTTTGGTCCGCAGCTCAGCATGAAGATTTACCAAGTATACGAGAG
TGAAACGCTGCAGAAAATCGAGGAAAATCCCTATCAGCTCGTTAAGGATGTTGAGGGGATCGGGTTTATTAAGGCGGATG
AGCTTGGCGCTAGAACAGGCATCTCAGGAAATGACCCAGAACGGATTCGCGCAGCCTTGCTATATACAGTGGAGACAGCC
AGTCTACAGGACGGTCATACGTACATACAAACGAAAGATTTGATCGTCGAAACCCGCAAGCTGCTCAACCAAACCGGCAA
TGATTACAAAGTGACTGAAATGGATGTTGCCAATCAGATCATTGCACTTGGCGAAGGAAAAGAAATGATCATTGAAGATG
ACCGCTGCTATCATCCATCCTTATTTTATGCGGAGCAAAGTGTCGCCAAACGCATTCAAAAAATCGTCTCCCAAACAGAA
TATGCAGATCAATTTCCTGAATCAGAATTCCTGCTGGCACTTGGCGAGCTGGAGGAGCGGTTAGGCGTCCAATATGCACC
GACACAAAAGGAAGCGATTCAAAAGGCACTCATGTCCCCGATGCTGCTTTTAACAGGCGGGCCTGGAACAGGGAAGACGA
CGGTCATTAAAGGAATTGTCGAGCTTTACAGTGATCTTCACGGTGTTTCTCTTGATCCGAGTGATTATAAAAAAGATGAA
TCCTTCCCATTTGTGCTTGCGGCACCAACTGGACGGGCGGCTAAACGGATGACAGAATCAACAGGGCTTCCAGCTGTCAC
CATTCACCGGCTGCTAGGCTGGAATGGTTCGGAGGGCTTCTCTCATGATGAGGAACAGCCGATTGAAGGAAAGCTTGTCA
TCATTGATGAATCAAGTATGCTGGATATTTGGCTGGCGAATCATTTGTTTAAAGCCATTCCTGATCATATCCAAGTGATT
ATGGTAGGGGATGAACATCAGCTGCCATCTGTCGGACCAGGCCAAGTTTTACGGGATTTGCTTGCCTCAAAAGCCGTGCC
GGCTGTTACCCTGACAGATATTTACCGGCAGGCAGACGGCTCAACCATTGTTGAACTTGCACATGATATGAAAAATGGTG
TGCTGCCAAAGGATATCACTGCACGCTCAAAGGATCGGTCCTTCATTCAGTGTTCAGCTGATCAAATGAAAGAAGTCATT
GAGAAAGTTGTCAGCAATGCTGCTCAAAAAGGGTTTTCGGCAAAGGATATTCAAGTGCTGGCACCGATGTATAAAGGAAA
AGCAGGCATCAATGAGCTCAACAAAATGCTGCAGCACATTTTGAATCCTAAAAAACCAAAGGGCAGAGAAATCCCGTTTG
GTGATGTGGTGTACCGGACAGGTGATAAGGTGCTTCAGCTTGTGAATCAGCCGGAGAACAACATTTTTAACGGCGATATC
GGTGAAATTGTCTCGATTTTTTATGCAAAAGAAAATACAGAAAAAGAAGACATGGCTGTGATCTCCTTTGATGGAAATGA
AATCACCTTTACAAAAAAAGATTTTCATCAATTTACACATGCTTATTGCTGCTCTATTCACAAATCACAAGGAAGTGAAT
TCCCGATTGTTGTGCTGCCAGTCGTCAGGAGCTACTACCGAATGCTTCGGCGGAATCTACTGTACACAGCCATTACACGC
AGTAAAAAGTTTTTAATACTGTGCGGCGAGGAATCAGCGCTGGAGTGGGGCGTGAAAAACAATGAGGATTCCCTCAGACA
AACGTCCTTAACGATGCGGCTAGTGCAAACCGAACAAATCATGGATGCAGAACTTGAAGCACTCCAAAAAGAGCTTCCGT
TTAGCGTACATGACGCAAATATTGGCATGGAGGGAATCACTCCGTTTGATTTTATGCATGAGTAG

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• AAA domain (AAA_30) (345-553)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	79.648	100	0.798