Detailed information NTG0970499

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: SOZ35_RS14010
• Genome accession: NZ_CP150480
• Coordinates: 2772408..2774801 (-)
• Length: 797 a.a.
• NCBI ID: WP_010789325.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain TL401
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2767408..2779801

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SOZ35_RS13975 (SOZ35_13975)	-	2768465..2769193 (+)	729	WP_061572700.1	amino acid ABC transporter ATP-binding protein	-
SOZ35_RS13980 (SOZ35_13980)	-	2769225..2770043 (+)	819	WP_268499426.1	transporter substrate-binding domain-containing protein	-
SOZ35_RS13985 (SOZ35_13985)	-	2770105..2770755 (+)	651	WP_003325317.1	amino acid ABC transporter permease	-
SOZ35_RS13990 (SOZ35_13990)	-	2770774..2771430 (+)	657	WP_003325316.1	amino acid ABC transporter permease	-
SOZ35_RS13995 (SOZ35_13995)	-	2771468..2771599 (-)	132	WP_268499381.1	YrzQ family protein	-
SOZ35_RS14000 (SOZ35_14000)	-	2771624..2771815 (-)	192	WP_003325314.1	hypothetical protein	-
SOZ35_RS14005 (SOZ35_14005)	-	2771828..2772292 (-)	465	WP_003325313.1	PRC-barrel domain-containing protein	-
SOZ35_RS14010 (SOZ35_14010)	recD2	2772408..2774801 (-)	2394	WP_010789325.1	ATP-dependent RecD-like DNA helicase	Machinery gene
SOZ35_RS14015 (SOZ35_14015)	-	2774835..2775455 (-)	621	WP_094233205.1	tetratricopeptide repeat protein	-
SOZ35_RS14020 (SOZ35_14020)	mnmA	2775546..2776661 (-)	1116	WP_003325310.1	tRNA 2-thiouridine(34) synthase MnmA	-
SOZ35_RS14025 (SOZ35_14025)	-	2776695..2777837 (-)	1143	WP_219946410.1	cysteine desulfurase family protein	-
SOZ35_RS14030 (SOZ35_14030)	cymR	2777856..2778272 (-)	417	WP_010789329.1	cysteine metabolism transcriptional regulator CymR	-
SOZ35_RS14035 (SOZ35_14035)	-	2778475..2779743 (+)	1269	WP_003325306.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 797 a.a.
• Molecular weight: 89219.90 Da
• Isoelectric Point: 5.1233

>NTDB_id=970499 SOZ35_RS14010 WP_010789325.1 2772408..2774801(-) (recD2) [Bacillus atrophaeus strain TL401]
MQQHPDQLKMEEEPFLKGAVTTVIYHNDANLYTVLKVKVTETSEAIEDKVVSVTGYFPALQEEETYTFYGKTATHPKFGL
QFQAEHFKKEIPTTKEGIIQYLSSDLFEGIGKKTAEEIVKKLGDSALNRILADSSVLYDVPKLSKKKADTLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVKDVEGIGFVKADELGGRMGISGNHPERIKAAILYSIETT
CLSEGHTYIETKQLIIDTQKLLNQSSEGQLVTEMDAANEIIALGENKAIMIEDDRCYFPSLYYAEQNVAKRVRHIASQTE
YEDQFPESEFLLALGDLEERTKVQYAASQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYSELHGASLDPSDYKKDE
VFPFVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTDENPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQII
IVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHDMKKGLLPANLTAPTKDRSFIRCGSLQIKEVV
EKVVTNALKKGYTARDIQVLAPMYRGKAGINELNVLLQGILNPPKEKRREIKFGDVVYRTGDKILQLVNQPENNVFNGDI
GEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAITR
AKKFLILCGEEEALEWGVKNNDATVRQTSLQRRLTLQAEEMDEELKALQKELPFSVYDANIGMEGITPFDFMKEEHS

Nucleotide

• Length: 2394 bp

>NTDB_id=970499 SOZ35_RS14010 WP_010789325.1 2772408..2774801(-) (recD2) [Bacillus atrophaeus strain TL401]
GTGCAGCAGCATCCGGATCAGCTGAAAATGGAGGAAGAACCCTTTTTAAAAGGTGCGGTAACCACTGTCATTTATCATAA
TGATGCCAATTTATATACAGTTTTGAAAGTGAAAGTCACAGAGACCTCCGAAGCGATTGAAGATAAAGTCGTATCCGTGA
CGGGCTACTTCCCTGCGCTGCAAGAAGAAGAGACCTACACGTTTTACGGAAAAACAGCCACCCATCCTAAATTCGGGCTC
CAGTTTCAAGCGGAGCACTTTAAAAAAGAGATCCCGACTACGAAGGAAGGGATCATCCAATACTTATCAAGTGATCTGTT
CGAAGGAATCGGAAAGAAAACGGCTGAAGAAATCGTCAAAAAACTGGGAGACAGCGCTCTTAATCGAATTCTCGCTGACT
CCTCAGTGCTTTACGATGTGCCGAAGCTGTCAAAAAAGAAAGCTGATACGCTGGCAGGAGCTCTTCAGCGGCATCAGGGC
CTGGAACAAATTATGATCTCGCTGAACCAGTTCGGATTCGGTCCGCAGCTTTCAATGAAAATTTATCAGGCATATGAATC
GGAAACACTTGAGAAGATTCAAGAAAATCCGTATCAGCTTGTGAAAGATGTGGAAGGCATCGGGTTTGTGAAAGCCGATG
AACTCGGGGGAAGAATGGGGATTTCCGGCAATCACCCTGAGCGGATTAAAGCAGCGATTTTGTATTCCATTGAAACGACA
TGTCTTTCAGAAGGGCATACGTACATAGAAACAAAGCAGCTTATTATTGATACGCAAAAGCTTTTGAACCAATCATCAGA
AGGACAGCTGGTGACAGAGATGGACGCAGCGAATGAAATCATTGCGCTTGGCGAAAATAAAGCTATCATGATTGAGGATG
ACCGCTGTTACTTTCCATCTTTATATTATGCGGAACAAAACGTAGCCAAGCGTGTCCGGCATATCGCAAGCCAAACTGAG
TATGAAGACCAATTTCCTGAATCTGAGTTTTTACTTGCGCTCGGTGATCTCGAAGAGCGTACGAAAGTTCAGTATGCGGC
AAGCCAAAAAGAAGCGATTCAAAAAGCGCTCTCGTCCCCGATGCTTCTGTTAACGGGAGGACCCGGCACCGGAAAAACCA
CCGTTATCAGAGGGATTGTGGAGTTATACAGTGAGCTTCACGGCGCTTCGCTTGATCCGTCCGATTATAAAAAAGATGAA
GTTTTTCCGTTTGTTTTGGCTGCGCCGACAGGAAGAGCCGCAAAACGAATGAGTGAATCGACCGGACTTCCGGCCGTGAC
GATTCACAGGCTGCTTGGCTGGAACGGGGCTGAAGGGTTTACTCATACAGACGAAAATCCGATTGAAGGAAAGCTGTTGA
TTATAGACGAAGCGAGTATGCTTGATATATGGCTCGCAAACCATTTGTTTAAAGCGATACCCGATCATATTCAAATTATT
ATAGTGGGGGATGAGGACCAGCTTCCTTCTGTCGGGCCGGGACAGGTGCTGCGGGATCTGTTGGCTTCGCAGGTCATTCC
GACAGTCAGGCTGACAGATATTTACCGGCAGGCAGAAGGTTCATCTATTGTGGAGCTTGCTCACGACATGAAAAAAGGCT
TGCTTCCGGCTAACCTGACAGCGCCGACGAAGGATCGTTCCTTTATCCGCTGCGGCTCATTACAAATCAAAGAAGTTGTT
GAAAAGGTCGTCACCAATGCGCTGAAAAAAGGCTACACAGCAAGGGATATACAGGTGCTGGCTCCGATGTACAGAGGAAA
AGCAGGCATTAATGAGCTTAATGTGCTGCTGCAGGGCATCTTAAATCCGCCGAAAGAAAAACGGCGCGAAATTAAATTCG
GCGATGTTGTTTATAGAACCGGCGATAAAATTTTACAGCTTGTGAATCAGCCGGAAAATAATGTGTTTAATGGTGATATT
GGTGAGATTACATCCATTTTCTACGCGAAGGAAAATACAGAAAAAGAAGATATGGCGGTTGTTTCCTTTGACGGAAATGA
AATGACCTTCACCAAAAAAGACTTCAGCCAGTTTACGCACGCTTATTGCTGCTCCATTCATAAATCTCAAGGCAGTGAAT
TTCCGATAGTCGTGCTTCCCGTTGTAAAAGGCTATTATCGAATGCTGAGAAGAAATCTCCTTTATACGGCAATTACAAGA
GCGAAAAAGTTTCTCATTTTATGCGGTGAAGAGGAAGCGCTGGAGTGGGGCGTGAAAAATAATGATGCGACAGTCAGACA
AACCTCTTTACAAAGAAGGCTGACGCTGCAGGCTGAGGAAATGGATGAAGAACTTAAAGCGCTTCAAAAAGAGCTGCCGT
TTAGCGTATACGACGCAAATATCGGCATGGAAGGCATTACGCCATTTGATTTCATGAAAGAAGAACATAGCTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-661)

• AAA domain (AAA_30) (345-553)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	92.095	100	0.921