Detailed information NTG0970245

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: ACLF6N_RS06655
• Genome accession: NZ_CP177279
• Coordinates: 1257319..1258236 (+)
• Length: 305 a.a.
• NCBI ID: WP_003232954.1
• Uniprot ID: A0A9W5LHY5
• Organism: Bacillus subtilis strain KFRI-P74
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1252319..1263236

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLF6N_RS06640 (ACLF6N_06640)	trpS	1252899..1253891 (-)	993	WP_003245134.1	tryptophan--tRNA ligase	-
ACLF6N_RS06645 (ACLF6N_06645)	oppA	1254635..1256272 (+)	1638	WP_412052560.1	oligopeptide ABC transporter substrate-binding protein OppA	-
ACLF6N_RS06650 (ACLF6N_06650)	oppB	1256380..1257315 (+)	936	WP_014479444.1	oligopeptide ABC transporter permease OppB	-
ACLF6N_RS06655 (ACLF6N_06655)	amiD	1257319..1258236 (+)	918	WP_003232954.1	oligopeptide ABC transporter permease OppC	Regulator
ACLF6N_RS06660 (ACLF6N_06660)	oppD	1258241..1259317 (+)	1077	WP_072173823.1	oligopeptide ABC transporter ATP-binding protein OppD	-
ACLF6N_RS06665 (ACLF6N_06665)	oppF	1259319..1260236 (+)	918	WP_003245567.1	oligopeptide ABC transporter ATP-binding protein OppF	-
ACLF6N_RS06670 (ACLF6N_06670)	yjbB	1260344..1261561 (+)	1218	WP_072592593.1	MFS transporter	-
ACLF6N_RS06675 (ACLF6N_06675)	yjbC	1261725..1262303 (+)	579	WP_003224597.1	GNAT family N-acetyltransferase	-
ACLF6N_RS06680 (ACLF6N_06680)	spx	1262484..1262879 (+)	396	WP_014476435.1	transcriptional regulator Spx	-

Sequence

Protein

• Length: 305 a.a.
• Molecular weight: 33621.12 Da
• Isoelectric Point: 10.2873

>NTDB_id=970245 ACLF6N_RS06655 WP_003232954.1 1257319..1258236(+) (amiD) [Bacillus subtilis strain KFRI-P74]
MQNIPKNMFEPAAANAGDAEKISKKSLSLWKDAMLRFRSNKLAMVGLIIIVLIILMAIFAPMFSRYDYSTTNLLNADKPP
SKDHWFGTDDLGRDIFVRTWVGARISIFIGVAAAVLDLLIGVIWGSISGFRGGRTDEIMMRIADILWAVPSLLMVILLMV
VLPKGLFTIIIAMTITGWINMARIVRGQVLQLKNQEYVLASQTLGAKTSRLLFKHIVPNAMGSILVTMTLTVPTAIFTEA
FLSYLGLGVPAPLASWGTMASDGLPALTYYPWRLFFPAGFICITMFGFNVVGDGLRDALDPKLRK

Nucleotide

• Length: 918 bp

>NTDB_id=970245 ACLF6N_RS06655 WP_003232954.1 1257319..1258236(+) (amiD) [Bacillus subtilis strain KFRI-P74]
ATGCAGAACATTCCGAAAAACATGTTTGAACCAGCCGCAGCGAATGCCGGCGATGCAGAAAAAATAAGTAAAAAGAGCCT
TTCCCTCTGGAAAGATGCGATGCTTCGCTTCCGCAGCAATAAGCTTGCAATGGTCGGGCTTATTATTATCGTGCTCATTA
TCCTTATGGCAATTTTTGCGCCGATGTTCTCAAGGTATGATTATTCAACTACTAATCTCTTAAATGCGGATAAGCCCCCT
TCAAAAGATCACTGGTTCGGAACAGATGATCTTGGGCGGGACATTTTCGTCCGTACATGGGTAGGGGCGCGAATCTCAAT
CTTTATCGGTGTTGCAGCTGCTGTTCTTGATTTGCTGATCGGCGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGCA
GAACGGACGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTT
GTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACGGGCTGGATTAATATGGCCAGAATCGTGCGCGG
ACAAGTGCTGCAGCTGAAGAATCAGGAGTATGTGCTTGCTTCACAGACACTGGGTGCAAAAACATCCCGTCTTCTGTTTA
AACATATCGTGCCAAACGCAATGGGTTCTATTTTGGTCACGATGACACTGACAGTTCCTACTGCGATTTTTACAGAAGCC
TTTTTAAGCTATTTGGGACTCGGTGTTCCGGCTCCGCTGGCAAGCTGGGGAACGATGGCTTCTGACGGATTGCCTGCATT
GACCTATTATCCGTGGCGTTTATTCTTCCCTGCCGGATTTATCTGCATTACAATGTTTGGCTTTAACGTTGTCGGCGACG
GATTAAGAGACGCATTGGATCCTAAGTTACGTAAATAA

Domains

Predicted by InterProScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (121-305)

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-79)

3D structure

• AlphaFold DB: A0A9W5LHY5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	35.922	100	0.364
amiD	Streptococcus thermophilus LMD-9	35.922	100	0.364