Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrP   Type   Regulator
Locus tag   MHI51_RS15690 Genome accession   NZ_CP150298
Coordinates   3529962..3531713 (-) Length   583 a.a.
NCBI ID   WP_076130605.1    Uniprot ID   -
Organism   Paenibacillus sp. FSL H8-0260     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 3524962..3536713
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI51_RS15675 (MHI51_15640) - 3525511..3526446 (+) 936 WP_081383287.1 carbohydrate ABC transporter permease -
  MHI51_RS15680 (MHI51_15645) - 3526537..3528099 (+) 1563 WP_076219240.1 ABC transporter substrate-binding protein -
  MHI51_RS15685 (MHI51_15650) rcrQ 3528202..3529962 (-) 1761 WP_076219233.1 ABC transporter ATP-binding protein Regulator
  MHI51_RS15690 (MHI51_15655) rcrP 3529962..3531713 (-) 1752 WP_076130605.1 ABC transporter ATP-binding protein Regulator
  MHI51_RS15695 (MHI51_15660) - 3531833..3532888 (-) 1056 WP_081387692.1 HAMP domain-containing sensor histidine kinase -
  MHI51_RS15700 (MHI51_15665) - 3532885..3533559 (-) 675 WP_036677195.1 response regulator transcription factor -
  MHI51_RS15705 (MHI51_15670) - 3533885..3534850 (+) 966 WP_076281835.1 aldo/keto reductase -
  MHI51_RS15710 (MHI51_15675) - 3534887..3535738 (+) 852 WP_405173083.1 aldo/keto reductase -

Sequence


Protein


Download         Length: 583 a.a.        Molecular weight: 63914.40 Da        Isoelectric Point: 7.2156

>NTDB_id=969902 MHI51_RS15690 WP_076130605.1 3529962..3531713(-) (rcrP) [Paenibacillus sp. FSL H8-0260]
MVTILKYLKPKEWALIGISILFIVTQVWLDLELPGYMSEITRLVQIPGSEMSEIIAAGGWMLLCALGSLATSIIVAGIAA
KIAANFSSRLRSKLFDKVQSFSMEEINNFSTASLITRSTNDITQVQMLIVIGLQLLVKAPILAVWAMLKITGKSWQWSLA
TGVAIGVLILIVGIVIVLVLPKFQKLQQLTDNLNRVARENLTGLRVIRAYNAESYQEDKFSVANSELTRTNLFANNVLSM
MMPSISLIMSGLSLAIYWIGAILIQNANGTAKMGLFSDMIVFSSYAMQVVMAFMMLIMIFILMPRAHVSAKRINEVLDTK
PSLENGSLTSSKANRLGEVEFKNVSFKYPDAEEYVIEDISFTVKKGETVAFIGSTGCGKSTVVNLIPRFYDATAGEVLVD
GINVNQYEQTALRNKMGYVSQKAILFGGTVSSNVAFGDNGSDLSSDVVDAIYTSQASDFVEKMEGSYEAHVSQGGTNLSG
GQKQRLSIARAIARRPEILIFDDSFSALDYKTDRKLRSELKKKSSGTTILIVAQRIGTIKDADKIIVLEAGRMAGMGTHD
ELMQTCDVYQEIAYSQLSKEELA

Nucleotide


Download         Length: 1752 bp        

>NTDB_id=969902 MHI51_RS15690 WP_076130605.1 3529962..3531713(-) (rcrP) [Paenibacillus sp. FSL H8-0260]
ATGGTAACTATACTTAAGTACTTAAAACCGAAGGAATGGGCCCTAATCGGTATCAGCATCCTATTCATTGTCACACAGGT
ATGGCTGGATCTGGAATTGCCCGGTTATATGAGCGAGATTACTCGTCTTGTACAGATACCAGGGAGTGAAATGAGCGAAA
TCATTGCAGCCGGAGGCTGGATGTTGCTCTGTGCCCTCGGCAGCTTAGCTACATCAATCATAGTGGCAGGGATCGCCGCT
AAAATTGCCGCTAACTTCTCTTCAAGATTACGCTCTAAATTGTTTGATAAGGTACAATCTTTTTCTATGGAAGAAATCAA
CAACTTCTCTACAGCTAGTTTAATTACCCGTTCAACGAATGACATTACGCAAGTGCAAATGCTGATTGTCATTGGTCTGC
AACTGCTGGTGAAGGCTCCCATCCTTGCCGTTTGGGCAATGCTCAAAATTACAGGCAAGAGTTGGCAGTGGTCGCTTGCT
ACCGGTGTCGCCATTGGGGTATTGATTCTTATTGTCGGCATAGTGATCGTGCTAGTGCTTCCGAAATTCCAAAAATTGCA
GCAACTGACTGATAATCTTAATCGTGTTGCAAGAGAGAATCTTACCGGCCTTCGTGTCATTCGTGCGTATAATGCGGAAA
GTTACCAGGAAGATAAATTTAGCGTAGCCAACAGCGAGCTTACCCGAACGAATTTATTCGCCAATAATGTACTGTCCATG
ATGATGCCAAGTATTTCTCTGATTATGAGCGGTTTAAGTCTCGCAATATATTGGATTGGTGCTATTTTGATTCAAAATGC
CAATGGTACGGCGAAGATGGGCTTATTTTCAGATATGATTGTCTTCTCATCCTATGCAATGCAGGTGGTTATGGCATTCA
TGATGCTGATCATGATTTTTATCCTGATGCCTCGTGCCCATGTATCCGCTAAAAGAATCAATGAAGTGCTGGATACTAAG
CCAAGCTTAGAGAACGGATCACTTACTTCCTCCAAGGCAAATCGGTTGGGTGAGGTCGAATTCAAAAATGTCAGCTTTAA
ATATCCGGATGCAGAAGAATACGTTATTGAAGATATCAGCTTTACGGTGAAAAAAGGAGAAACTGTAGCCTTCATCGGTT
CAACCGGATGCGGAAAAAGTACCGTCGTGAACCTGATTCCTCGCTTTTATGATGCTACAGCAGGTGAAGTGTTGGTGGAT
GGAATTAATGTTAACCAATATGAGCAAACTGCACTGCGCAATAAAATGGGATATGTATCTCAGAAAGCGATTTTGTTTGG
CGGCACGGTGAGCTCTAATGTTGCTTTTGGCGATAATGGCAGTGATCTGTCCTCGGATGTTGTTGATGCCATTTACACCT
CTCAAGCTTCAGATTTTGTTGAAAAGATGGAAGGAAGCTACGAGGCTCATGTCTCTCAAGGCGGTACGAACTTGTCTGGC
GGTCAAAAACAACGTCTTTCCATTGCCCGAGCCATTGCCCGTCGTCCTGAAATATTAATCTTCGACGATTCCTTCTCAGC
GCTTGATTATAAGACGGATCGCAAATTGCGAAGTGAATTGAAGAAAAAATCCAGCGGTACAACGATACTAATCGTTGCCC
AGCGTATCGGTACAATCAAAGATGCAGACAAAATCATTGTACTGGAAGCCGGACGAATGGCAGGCATGGGAACACATGAT
GAATTGATGCAGACCTGTGATGTCTACCAAGAGATTGCTTACTCACAACTTTCAAAGGAGGAGCTAGCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

52.013

100

0.532


Multiple sequence alignment