Detailed information NTG0969753

Bioinformatically predicted

Overview

• Name: recD/recD2/recDB
• Type: Machinery gene
• Locus tag: ACJWMC_RS09165
• Genome accession: NZ_CP177181
• Coordinates: 1967436..1969940 (+)
• Length: 834 a.a.
• NCBI ID: WP_002891891.1
• Uniprot ID: J7T537
• Organism: Streptococcus salivarius strain MRD1919
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1962436..1974940

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJWMC_RS09145	-	1964673..1965215 (-)	543	WP_002891882.1	CvpA family protein	-
ACJWMC_RS09150	zapA	1965212..1965526 (-)	315	WP_004183554.1	cell division protein ZapA	-
ACJWMC_RS09155	rnhC	1965843..1966733 (+)	891	WP_037598481.1	ribonuclease HIII	-
ACJWMC_RS09160	lepB	1966752..1967375 (+)	624	WP_002891889.1	signal peptidase I	-
ACJWMC_RS09165	recD/recD2/recDB	1967436..1969940 (+)	2505	WP_002891891.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ACJWMC_RS09170	-	1969992..1970318 (-)	327	WP_037598482.1	AzlD domain-containing protein	-
ACJWMC_RS09175	-	1970305..1970997 (-)	693	WP_037598483.1	AzlC family ABC transporter permease	-
ACJWMC_RS09180	tsaD	1971049..1972062 (-)	1014	WP_002891900.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
ACJWMC_RS09185	rimI	1972062..1972517 (-)	456	WP_002891902.1	ribosomal protein S18-alanine N-acetyltransferase	-
ACJWMC_RS09190	tsaB	1972477..1973163 (-)	687	WP_037598485.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
ACJWMC_RS09195	-	1973424..1973654 (+)	231	WP_002884752.1	DNA-dependent RNA polymerase subunit epsilon	-

Sequence

Protein

• Length: 834 a.a.
• Molecular weight: 93726.91 Da
• Isoelectric Point: 4.4058

>NTDB_id=969753 ACJWMC_RS09165 WP_002891891.1 1967436..1969940(+) (recD/recD2/recDB) [Streptococcus salivarius strain MRD1919]
MQEFYFSGTIERVIFENASNFFRILLLEIDETDSDFEDYEIIVTGTMGDVMEGEDYTFWGQLTNHPKYGEQLQMTRYERS
KPSASGLIKYFASDNFKGIGKKTAERIVEIYGEDPIDKILEDPSELEQIPNLSKVNREAFVAKLKINYGAEQILSKLSSY
GLTPKAASQIFNQYKEESLNLIEEHPYLLVEEIQGIGFKMADQLAERLGIASDAPERLRAALIHCLLEASMEEGDTYIEA
KALLERTIILLEGARPIELDPALVANQLTNLIQEDKVQNVETKIFDNTLYFAEQGIYTHLTRIMKDQPDVSSEDKILDSL
EGVEEELGITYDQVQKDAIIKALQSKVFILTGGPGTGKTTVINGIIKTYADLHGLDLKKSDLPIILAAPTGRAARRMNEL
TQLPSATIHRHLGLNSEDDFKTLEDYLDCDLIIIDEFSMVDTWLANQLFESISDSTQVIIVGDQDQLPSVGPGQVLADLL
QIDNLPKVSLTKIFRQSEDSTIVTLASQMRQGQLPADFTEKKADRSYFEANANHIPQMVPKIVSAAIKSGIAAQDVQILA
PMYRGQAGINNLNTIMQDLLNPQEKANQFAFNDIFFRKNDKILHLVNDTELNVFNGDIGIITDLIPGKYTESKQDEIYMS
FDGNEVIYPRNEWSKITLAYAMSIHKSQGSEFPVVILPITRQSGRMLQRNLIYTAITRAKSKLVMLGEIAAFDYAVHNEG
AKRNTYLIQRFEQTYTQAVDKSVEKIVKNEATDASNQTKKENNESSEPLENKDISGNLNPSPALINTYSQPVDKSVNKPV
QTEENYRLTEDNWSTIDPMIGLSEDDIAAFFNNN

Nucleotide

• Length: 2505 bp

>NTDB_id=969753 ACJWMC_RS09165 WP_002891891.1 1967436..1969940(+) (recD/recD2/recDB) [Streptococcus salivarius strain MRD1919]
ATGCAAGAATTTTATTTTTCAGGAACTATCGAACGCGTCATTTTCGAAAACGCTAGCAATTTTTTTCGTATCTTACTCTT
AGAGATTGACGAAACGGACAGTGATTTTGAAGACTACGAAATCATTGTCACAGGAACTATGGGGGATGTCATGGAGGGTG
AAGACTATACCTTCTGGGGCCAACTAACCAATCACCCTAAATATGGGGAACAGCTACAAATGACCCGCTACGAGCGTTCA
AAACCTTCTGCTAGCGGTCTTATCAAATATTTTGCCAGCGATAATTTCAAAGGAATCGGTAAGAAAACGGCCGAGCGTAT
TGTCGAAATTTACGGAGAAGACCCTATTGACAAGATTCTCGAGGATCCTAGCGAGTTAGAGCAAATCCCCAACCTCTCCA
AGGTCAATCGAGAAGCCTTTGTTGCTAAGTTAAAAATCAATTATGGAGCCGAGCAAATCCTGTCCAAACTTTCTAGCTAT
GGACTCACACCAAAGGCCGCCTCACAAATTTTCAACCAATATAAGGAAGAGTCACTAAATCTTATTGAGGAACACCCTTA
TCTATTAGTAGAGGAGATTCAAGGAATCGGTTTTAAAATGGCTGACCAACTAGCTGAACGTCTTGGAATTGCTAGTGATG
CTCCTGAGCGTTTACGAGCTGCCTTGATTCATTGTCTACTAGAAGCCAGTATGGAAGAAGGCGACACCTACATAGAAGCC
AAAGCCTTGCTTGAACGGACCATCATTCTTTTGGAAGGTGCTCGTCCGATTGAACTTGACCCCGCCTTGGTCGCTAACCA
ATTAACCAATCTTATCCAAGAGGATAAGGTGCAAAATGTAGAGACTAAAATCTTTGATAATACCCTGTATTTTGCGGAAC
AGGGCATCTATACCCACCTAACTCGTATCATGAAGGACCAACCTGATGTCAGCTCTGAAGACAAAATCTTAGACAGCCTT
GAAGGGGTGGAAGAGGAGCTTGGTATTACTTATGATCAGGTTCAAAAAGATGCCATTATCAAAGCCCTACAAAGCAAGGT
CTTTATCCTAACAGGTGGTCCCGGAACAGGGAAAACCACTGTTATTAACGGCATTATTAAAACCTATGCTGACCTTCATG
GCCTAGATCTCAAAAAGTCTGATTTACCTATTATTTTAGCAGCACCAACGGGACGGGCTGCTCGCCGGATGAACGAACTC
ACCCAACTCCCTAGCGCCACTATTCATAGACATTTAGGACTCAATAGTGAGGACGATTTTAAGACCTTAGAGGACTATCT
CGATTGCGATTTGATTATCATCGATGAGTTCTCTATGGTTGATACTTGGTTGGCCAATCAACTCTTTGAAAGTATCTCTG
ATTCAACCCAAGTTATCATTGTGGGTGACCAAGACCAACTACCTTCCGTAGGCCCTGGCCAAGTCTTGGCTGACCTTTTG
CAGATTGATAACTTGCCTAAGGTTTCCCTAACCAAAATTTTCAGACAATCCGAGGATTCCACTATCGTTACCCTAGCTAG
CCAGATGCGCCAAGGCCAACTACCCGCTGATTTCACAGAGAAAAAGGCTGACCGCTCTTACTTTGAGGCCAATGCCAACC
ATATTCCACAGATGGTTCCTAAAATCGTCTCTGCTGCGATAAAGAGTGGGATTGCAGCTCAGGATGTTCAGATTCTAGCC
CCCATGTACCGAGGACAGGCTGGTATTAACAATCTCAATACCATTATGCAAGACCTACTTAATCCTCAAGAAAAGGCCAA
TCAGTTCGCCTTTAATGATATCTTCTTCCGCAAGAATGACAAGATTCTCCATCTGGTCAACGATACAGAACTCAATGTCT
TCAATGGCGACATCGGCATCATTACTGATCTCATCCCTGGTAAATATACTGAAAGCAAGCAGGATGAAATTTACATGTCC
TTCGATGGCAATGAAGTTATCTACCCTCGTAACGAATGGAGTAAGATTACTCTGGCCTATGCCATGTCAATCCATAAATC
CCAAGGAAGTGAGTTCCCAGTCGTTATCCTTCCCATCACACGCCAAAGTGGGCGTATGCTACAACGTAACCTCATTTACA
CCGCAATCACACGCGCCAAGAGTAAACTAGTCATGCTGGGGGAAATCGCAGCCTTCGATTATGCTGTTCACAACGAGGGG
GCTAAACGAAATACTTATCTCATCCAACGTTTTGAACAAACTTATACACAAGCTGTTGATAAGTCTGTAGAAAAGATTGT
TAAAAACGAGGCAACAGACGCATCCAATCAAACCAAAAAGGAAAACAACGAATCCTCAGAACCCCTTGAAAACAAAGACA
TTTCGGGAAATCTAAATCCATCTCCAGCTCTTATTAACACTTATTCACAGCCTGTGGATAAGTCTGTTAACAAACCTGTG
CAAACCGAAGAAAACTATCGTTTAACTGAAGATAATTGGTCAACTATAGATCCAATGATTGGTCTCAGTGAAGACGATAT
TGCTGCCTTTTTTAACAATAACTAA

Domains

Predicted by InterProScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (659-705)

• AAA domain (AAA_30) (331-523)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (572-638)

• Helix-hairpin-helix containing domain (HHH_RecD2) (148-237)

3D structure

• AlphaFold DB: J7T537

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD/recD2/recDB	Bacillus subtilis subsp. subtilis str. 168	44.98	89.568	0.403