Detailed information NTG0969702

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: NSQ62_RS14230
• Genome accession: NZ_CP150291
• Coordinates: 2859995..2862508 (-)
• Length: 837 a.a.
• NCBI ID: WP_341323944.1
• Uniprot ID: -
• Organism: Solibacillus sp. FSL H8-0523
• Function: homologous recombination (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	2863466..2864817	2859995..2862508	flank	958

Gene organization within MGE regions

Location: 2859995..2864817

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NSQ62_RS14230 (NSQ62_14230)	recD2	2859995..2862508 (-)	2514	WP_341323944.1	ATP-dependent RecD-like DNA helicase	Machinery gene
NSQ62_RS14235 (NSQ62_14235)	hisA	2862659..2863411 (+)	753	WP_341320793.1	phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase	-

Sequence

Protein

• Length: 837 a.a.
• Molecular weight: 92805.38 Da
• Isoelectric Point: 4.9472

>NTDB_id=969702 NSQ62_RS14230 WP_341323944.1 2859995..2862508(-) (recD2) [Solibacillus sp. FSL H8-0523]
MAENLNLFELNKNFILGRPIVTIFHNATNMYSIVRVKIQETNIQHEEKEIIVVGYFPKLTEDELYRFTGQVKTHPKYGLQ
FQIETFEKEVPTTEQGIVHYLSSDLFTGVGRKTAEIIVEKLGLNALTIILEDASALDAVPRLSAEKKLHIRQTIEENLGL
ERVMVRLNEWGFGPQLGMKIYQAYREETITLLTENPYRLIEEVEGVGFIRADELGSKLGITGNHPDRIKAAIFHVLTQAA
LSEGHVYLDAEMVLPQVKSMLEQSQRIEIPYEAISQAAIDMREQSKICGEETRMYLPSLYFSEVGIASKINELKEKNKLA
QNFSSDEIRKAIGDIEEQYEVTYAPTQAQAIETALNSAVMILTGGPGTGKTTVVRGLVEVYAELHGLSLDPKTYAEKEEP
FPIVLAAPTGRAAKRLAESTGLPAMTIHRLLGFNGHEKDEETEREVVGRLIIIDEMSMVDTWLAHQLLKALHEDVQVVFV
GDQDQLPPVGPGQVLKDLLGSQQIPIVELTDVYRQAEGSTIIEMAHQIKKGIVPDTLTAKTSDRSFIQAAGAQVTSVVTQ
VVKGALAKGQAIRDIQVLAPMYRGPAGIDNLNKEIQQLVNPNDGTRKELVFGDTIYRIGDKVLQLVNQPENNVFNGDMGE
VIAIIRAKETVEKQDLLVVSYDGIEVTYQRPDLNQITLAYCCSIHKSQGSEFQTVIMPVVRGYSKMLRRNLLYTGITRAK
NFLILCGEPDVLAKGLATTDDLMRLTTLKARLNPALVTEVTVNSVAAAPPVTQQKEPSETKPQPAPKEPASEQLGLLNTV
DSHKIGEALPTQLTTETAPYIHPLIGIDGISPYDFNE

Nucleotide

• Length: 2514 bp

>NTDB_id=969702 NSQ62_RS14230 WP_341323944.1 2859995..2862508(-) (recD2) [Solibacillus sp. FSL H8-0523]
ATGGCGGAAAATCTCAATTTATTCGAGCTAAATAAAAACTTTATTTTAGGTCGCCCCATCGTAACAATATTTCATAATGC
AACGAATATGTACTCCATTGTTCGTGTCAAAATTCAAGAAACGAATATCCAGCATGAGGAAAAGGAAATTATCGTTGTTG
GCTATTTTCCAAAATTAACGGAAGACGAGCTATACCGCTTTACCGGGCAAGTAAAAACCCATCCAAAATACGGACTGCAG
TTTCAAATTGAAACATTTGAAAAGGAAGTACCGACAACCGAGCAGGGCATTGTCCATTATTTATCCAGTGACTTATTCAC
AGGGGTCGGTCGAAAAACAGCCGAAATAATTGTCGAAAAGCTCGGACTCAATGCACTCACAATTATTTTAGAGGACGCGT
CTGCGCTTGATGCCGTTCCGCGTTTGTCAGCTGAAAAGAAGTTACACATTCGCCAAACGATTGAAGAAAACTTAGGGCTT
GAGCGTGTGATGGTTCGCCTGAATGAATGGGGCTTTGGTCCACAACTGGGAATGAAGATTTATCAGGCGTATCGCGAGGA
AACGATCACGCTATTAACTGAAAATCCGTACCGTTTAATTGAAGAGGTTGAAGGGGTCGGCTTTATTCGTGCAGATGAAC
TAGGCTCCAAGCTAGGTATTACCGGTAATCACCCAGATCGTATTAAGGCGGCGATTTTTCATGTGCTAACACAGGCGGCG
CTGTCAGAAGGTCATGTTTACTTAGATGCCGAAATGGTGTTACCGCAAGTGAAATCGATGCTTGAGCAAAGTCAACGTAT
TGAAATACCATATGAAGCGATTTCACAAGCTGCAATCGACATGCGTGAGCAATCGAAAATTTGCGGCGAAGAAACGCGTA
TGTATTTGCCTTCCCTGTATTTTAGTGAGGTTGGCATTGCGAGTAAAATTAATGAACTGAAAGAAAAAAATAAATTAGCG
CAAAATTTCTCGAGTGACGAAATTCGTAAAGCGATTGGCGATATTGAAGAACAATATGAAGTAACCTATGCACCAACGCA
AGCCCAAGCGATTGAAACCGCGCTCAACTCAGCGGTTATGATTTTAACAGGTGGCCCAGGTACGGGGAAAACTACGGTTG
TGCGCGGATTAGTTGAAGTGTATGCAGAGCTACACGGCTTATCGCTAGATCCGAAAACGTATGCGGAAAAAGAAGAGCCG
TTTCCCATTGTGTTAGCGGCACCTACAGGACGCGCCGCGAAACGGTTAGCAGAATCAACGGGCTTACCCGCAATGACAAT
TCACCGTTTACTTGGATTTAACGGTCATGAAAAGGATGAGGAGACTGAGCGTGAGGTAGTGGGACGTCTTATTATTATCG
ATGAGATGTCAATGGTCGATACATGGCTTGCCCATCAGTTACTAAAAGCATTACATGAAGATGTACAAGTTGTGTTTGTT
GGCGACCAGGATCAGCTACCGCCTGTAGGTCCAGGGCAAGTATTAAAGGACTTACTCGGTTCACAACAAATTCCTATCGT
CGAATTAACGGACGTCTATCGTCAAGCGGAAGGCTCAACGATAATCGAAATGGCGCACCAAATTAAAAAAGGGATTGTCC
CAGATACATTAACGGCAAAAACGTCAGATCGTTCGTTTATTCAAGCGGCGGGTGCCCAGGTGACGAGTGTAGTCACGCAA
GTTGTCAAAGGGGCATTAGCAAAGGGTCAGGCCATTCGTGATATTCAAGTGCTTGCACCGATGTACCGAGGTCCGGCTGG
GATTGATAATTTAAATAAAGAAATTCAACAGCTCGTGAATCCAAATGATGGGACGCGAAAAGAGCTTGTGTTCGGAGATA
CGATTTACCGGATTGGTGATAAAGTATTACAGCTTGTCAATCAGCCAGAAAACAATGTATTTAATGGGGATATGGGGGAA
GTCATCGCTATTATCCGTGCAAAAGAAACTGTAGAAAAGCAAGACCTCCTTGTTGTGTCATATGATGGTATTGAAGTGAC
GTATCAACGACCAGACCTAAATCAAATTACACTTGCCTATTGCTGTTCGATTCATAAATCACAAGGCTCAGAGTTCCAAA
CGGTGATTATGCCAGTTGTGCGCGGTTATTCGAAAATGCTACGACGTAACTTACTTTATACAGGTATTACGCGTGCTAAA
AACTTTTTAATTTTATGTGGGGAACCAGACGTCTTGGCAAAAGGACTCGCAACGACCGATGATTTAATGCGTCTAACGAC
ATTAAAGGCACGATTAAATCCGGCATTAGTAACAGAAGTCACTGTAAATTCTGTCGCAGCAGCTCCGCCTGTAACACAAC
AAAAAGAACCTTCAGAAACAAAGCCACAGCCAGCCCCAAAAGAGCCAGCTTCAGAACAGCTCGGCTTATTGAATACTGTA
GATTCTCATAAAATTGGTGAAGCACTGCCGACGCAACTAACGACGGAAACAGCACCATACATTCATCCACTAATTGGCAT
AGATGGTATTTCGCCATATGATTTTAATGAGTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (591-651)

• AAA domain (AAA_30) (343-549)

• Helix-hairpin-helix containing domain (HHH_RecD2) (159-247)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (679-726)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	55.72	88.769	0.495