Detailed information NTG0969538

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: MHB78_RS08340
• Genome accession: NZ_CP150286
• Coordinates: 1539270..1541642 (+)
• Length: 790 a.a.
• NCBI ID: WP_046132153.1
• Uniprot ID: A0AAE2JUU7
• Organism: Bacillus sp. FSL K6-0138
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1534270..1546642

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MHB78_RS08320 (MHB78_08320)	-	1535696..1536112 (+)	417	WP_046132114.1	Rrf2 family transcriptional regulator	-
MHB78_RS08325 (MHB78_08325)	-	1536132..1537271 (+)	1140	WP_046132115.1	cysteine desulfurase family protein	-
MHB78_RS08330 (MHB78_08330)	mnmA	1537356..1538474 (+)	1119	WP_046132116.1	tRNA 2-thiouridine(34) synthase MnmA	-
MHB78_RS08335 (MHB78_08335)	-	1538562..1539212 (+)	651	WP_046132117.1	tetratricopeptide repeat protein	-
MHB78_RS08340 (MHB78_08340)	recD2	1539270..1541642 (+)	2373	WP_046132153.1	ATP-dependent RecD-like DNA helicase	Machinery gene
MHB78_RS08345 (MHB78_08345)	-	1541731..1542192 (+)	462	WP_046132118.1	PRC-barrel domain-containing protein	-
MHB78_RS08350 (MHB78_08350)	-	1542212..1542403 (+)	192	WP_046132119.1	hypothetical protein	-
MHB78_RS08355 (MHB78_08355)	-	1542419..1542550 (+)	132	WP_065894754.1	YrzQ family protein	-
MHB78_RS08360 (MHB78_08360)	-	1542584..1543234 (-)	651	WP_046132120.1	amino acid ABC transporter permease	-
MHB78_RS08365 (MHB78_08365)	-	1543256..1543906 (-)	651	WP_046132121.1	amino acid ABC transporter permease	-
MHB78_RS08370 (MHB78_08370)	-	1543946..1544752 (-)	807	WP_099047115.1	transporter substrate-binding domain-containing protein	-
MHB78_RS08375 (MHB78_08375)	-	1544782..1545510 (-)	729	WP_046132123.1	amino acid ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 790 a.a.
• Molecular weight: 88964.40 Da
• Isoelectric Point: 4.9625

>NTDB_id=969538 MHB78_RS08340 WP_046132153.1 1539270..1541642(+) (recD2) [Bacillus sp. FSL K6-0138]
MRMDEASFLKGTVTTVIYHNETNLYTVLKVKVQETSESFDEKTVSVTGYFPAIFEDETYTFYGKTASHPKFGLQFQTDHF
KKEVPTTKEGVIQYLSSDLFEGIGKKTAEEIVNKLGEGAINKILGDASVLYDVPKLSKKKADKLAAALQQHQGLEQIMIS
LSEFGFGPQLSMKIYQAYESETLDKIRENPYQLVKDVEGIGFVKADELGGRMGISGRHPERVKAAILFTIEAACLQEGHT
YIETKQLIIETQKLLNQSPGEEKVTEMDVADSIISLGEQKELFIEDDRCYYPSLYYAEQSFAKRVLTIAEQTEYDDQFPE
SEFLLALGELEERMQVQYAPSQKEAIQKALMSPMLLLTGGPGTGKTTVIRGIVELYSELHGLSLNPADYKKDEAFPFVLA
APTGRAAKRMSESTGLPAVTIHRLLGWNGSEGFTHDEDNPIEGRLVIIDETSMLDIWLANQLFKAIPNRIQVIMVGDEDQ
LPSVGPGQVLRDLLASNVIPSVRLTDIYRQAEGSSIVELAHDMKKGRLPQNLTAPTKDRSFIRCRQQQMKEVVEKVVQNA
LQKGYSARDIQVLAPMYRGPAGINELNVLLQNILNPPKQKGRELKYGDVVYRTGDKVLQLVNQPEHNVFNGDMGEIVSIF
YAKENTEKEDMAVVSFDGNEITFTKKDFNQFTHAYCCSIHKSQGSEFPIVILPVVKSYYRMLRRNLLYTAITRSKKFLIL
CGEEEALEWGIKNKDSSERQTSLKRRLQQAAHEEDEELAALQKELPFSIYDANIGMEGITPFDFMEKEAE

Nucleotide

• Length: 2373 bp

>NTDB_id=969538 MHB78_RS08340 WP_046132153.1 1539270..1541642(+) (recD2) [Bacillus sp. FSL K6-0138]
ATGCGAATGGATGAGGCGTCCTTTCTGAAGGGAACGGTAACAACTGTCATCTATCACAACGAAACAAATCTCTATACCGT
GCTGAAAGTAAAAGTCCAGGAAACATCTGAATCGTTTGATGAGAAAACCGTTTCCGTCACAGGTTATTTTCCGGCGATCT
TTGAAGATGAAACGTATACGTTTTACGGAAAAACCGCCTCCCATCCGAAGTTCGGCCTCCAATTTCAGACGGATCATTTT
AAAAAAGAAGTCCCCACGACAAAAGAGGGCGTCATTCAATATTTGTCGAGCGACTTGTTTGAAGGCATCGGCAAAAAAAC
GGCAGAAGAAATCGTCAATAAGCTCGGGGAAGGCGCGATCAACAAAATTCTGGGCGACGCTTCAGTGCTTTACGACGTCC
CGAAGCTGTCAAAGAAAAAAGCGGATAAGCTTGCCGCCGCGCTTCAGCAGCACCAGGGGCTCGAGCAGATCATGATTTCG
TTAAGCGAGTTCGGTTTTGGACCCCAGCTTTCGATGAAAATTTATCAGGCATATGAATCGGAAACGCTTGATAAAATCCG
CGAAAATCCGTACCAGCTCGTGAAGGACGTCGAAGGGATCGGCTTTGTGAAAGCGGATGAACTGGGCGGCCGAATGGGGA
TTTCGGGCAGGCATCCAGAACGGGTCAAAGCGGCGATTTTATTTACGATCGAAGCGGCATGCCTGCAGGAAGGGCATACT
TACATCGAGACAAAACAGCTCATCATCGAGACGCAAAAGCTGCTGAACCAGTCGCCAGGCGAAGAAAAGGTGACCGAAAT
GGATGTGGCGGATTCGATCATTTCGCTCGGCGAACAAAAGGAATTGTTCATAGAAGATGACAGGTGCTACTATCCTTCGC
TTTACTATGCTGAACAAAGCTTTGCCAAAAGGGTGCTGACGATCGCGGAACAAACCGAATATGACGATCAGTTCCCCGAA
TCGGAATTTTTGCTTGCTTTAGGGGAGCTTGAGGAACGGATGCAGGTTCAGTACGCGCCAAGCCAAAAAGAAGCGATTCA
AAAAGCGCTGATGTCTCCGATGCTCCTTTTAACCGGAGGACCGGGGACTGGGAAAACGACGGTCATCAGGGGAATTGTCG
AATTGTACAGCGAGCTTCACGGTTTGAGCTTGAATCCGGCTGATTATAAAAAAGACGAGGCGTTTCCGTTTGTCCTGGCT
GCGCCGACAGGCAGAGCGGCCAAACGGATGAGCGAGTCGACGGGGCTTCCGGCCGTGACGATTCACAGGCTCCTCGGCTG
GAACGGTTCTGAAGGGTTTACACATGACGAGGACAACCCGATCGAAGGCCGGCTGGTAATTATCGACGAGACGAGCATGC
TCGATATATGGCTTGCCAATCAATTGTTCAAAGCGATACCCAACCGGATACAGGTCATCATGGTCGGAGACGAAGATCAG
CTTCCGTCCGTCGGACCGGGACAGGTGCTCAGGGATCTTTTAGCCTCGAACGTCATTCCTTCCGTCAGATTAACCGATAT
CTACCGGCAGGCTGAAGGTTCATCAATCGTGGAACTTGCGCATGATATGAAAAAGGGCCGGCTGCCGCAAAATTTGACAG
CGCCGACAAAGGACCGGTCATTTATCAGGTGCCGTCAGCAGCAAATGAAAGAGGTCGTGGAAAAAGTCGTCCAAAACGCA
TTGCAAAAAGGGTATTCCGCACGGGACATCCAAGTGCTCGCTCCGATGTACAGAGGACCGGCGGGAATCAATGAATTAAA
CGTGCTTTTGCAAAACATCCTCAATCCGCCGAAGCAAAAAGGCAGGGAATTGAAGTACGGGGATGTCGTCTACAGGACGG
GAGATAAAGTTCTTCAGCTCGTCAACCAGCCGGAGCACAATGTGTTTAACGGAGATATGGGAGAAATCGTCTCCATCTTT
TATGCGAAGGAAAATACGGAAAAAGAAGACATGGCCGTCGTCTCTTTCGACGGCAACGAGATCACATTCACCAAAAAGGA
TTTTAATCAGTTTACGCATGCTTACTGCTGTTCGATTCATAAATCGCAGGGCAGCGAATTTCCGATCGTCATCCTTCCCG
TCGTCAAAAGCTATTACCGGATGCTGAGAAGAAATCTGCTTTATACGGCAATTACAAGAAGCAAAAAATTTCTCATTTTG
TGCGGCGAAGAGGAAGCGCTCGAATGGGGCATCAAAAACAAAGATTCCTCTGAAAGGCAGACTTCGCTCAAGAGAAGGCT
TCAGCAGGCAGCGCATGAAGAAGACGAAGAGCTCGCCGCGCTCCAAAAGGAGCTGCCGTTTAGCATATATGACGCCAATA
TCGGCATGGAGGGCATTACACCGTTTGACTTTATGGAAAAAGAGGCGGAATAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (151-241)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (586-654)

• AAA domain (AAA_30) (338-546)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (673-721)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	82.51	99.873	0.824