Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   ACJVC4_RS09120 Genome accession   NZ_CP177179
Coordinates   1964043..1966391 (+) Length   782 a.a.
NCBI ID   WP_037598480.1    Uniprot ID   -
Organism   Streptococcus salivarius strain MRD-NRLLH     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1959043..1971391
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJVC4_RS09110 - 1961076..1963094 (-) 2019 WP_002891874.1 FtsX-like permease family protein -
  ACJVC4_RS09115 - 1963104..1963838 (-) 735 WP_002891877.1 ABC transporter ATP-binding protein -
  ACJVC4_RS09120 mutS/mutS2 1964043..1966391 (+) 2349 WP_037598480.1 endonuclease MutS2 Machinery gene
  ACJVC4_RS09125 - 1966493..1967035 (-) 543 WP_002891882.1 CvpA family protein -
  ACJVC4_RS09130 zapA 1967032..1967346 (-) 315 WP_004183554.1 cell division protein ZapA -
  ACJVC4_RS09135 rnhC 1967663..1968553 (+) 891 WP_037598481.1 ribonuclease HIII -
  ACJVC4_RS09140 lepB 1968572..1969195 (+) 624 WP_002891889.1 signal peptidase I -

Sequence

Protein


Download         Length: 782 a.a.        Molecular weight: 87643.98 Da        Isoelectric Point: 6.6233

>NTDB_id=969512 ACJVC4_RS09120 WP_037598480.1 1964043..1966391(+) (mutS/mutS2) [Streptococcus salivarius strain MRD-NRLLH]
MNTKILDQLEFNKVKDQFTEYLQTEQAQAELRDLVPMTNPERIQNQFTEIQEMAEIFVEHHGFAIGSLRDISEPLRRLEL
DADLNIQELIAIKKVLQASADLGRFYADLENVELIALKRLFEKIEAFPSLQGSLQSINDGGFIEHFASPELQNIRRQLKS
CDDAIRQTLQDILKKSGHMLAESLIASRNGRSVLPVKNTYRNRIAGVVHDISSSGNTVYIEPRAVIQLNEEITQLRADER
HEMARILHELSEQLRPQAAAIANNAWILGHMDFIRGKYLYLHDKKAVIPKISDNQTLQLLNVRHPLLVNPVANDLHFDED
LTAIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILNAAD
SNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGIETQHVENASMEFDTATLSPTYRFMQGVPG
RSNAFEIARRLGLNEIIVKEAENLTDTDSDVNRIIEQLEAQTVETQKRLEHIKDVEQENLKFNRAVKKLYNEFSHEYDKE
LEKAQKEIQEMVDTALAESNSILKNLHDKSQLKPHEVIDAKGKLKKLAPQVDLSKNKVLRKAKKEKAARAPRVGDDIIVT
AYGQRGTLTSQAKNGNWEAQVGLIKMTLKADEFTLVRAQAEAQQPKKKQINVVKKAKKTSGGPRARLDLRGKRYEEAMQE
LDAFIDQALLNNMSQVDIIHGIGTGVIRDAVTKYLRRHRHVKSFEYAPQSAGGSGCTIATLG

Nucleotide


Download         Length: 2349 bp        

>NTDB_id=969512 ACJVC4_RS09120 WP_037598480.1 1964043..1966391(+) (mutS/mutS2) [Streptococcus salivarius strain MRD-NRLLH]
ATGAACACAAAGATTTTAGACCAATTAGAATTTAACAAGGTCAAGGACCAGTTCACAGAATACCTGCAGACTGAACAGGC
TCAGGCGGAGTTGCGTGACTTGGTGCCTATGACCAATCCAGAAAGAATTCAAAATCAATTTACAGAAATTCAAGAAATGG
CAGAGATTTTCGTAGAGCACCATGGCTTTGCCATTGGTAGCTTGCGAGATATTTCTGAGCCCTTGCGTCGTTTGGAACTG
GATGCTGACCTCAACATTCAGGAGCTCATTGCCATCAAGAAGGTGCTACAAGCTTCAGCTGACCTCGGTCGCTTTTACGC
TGACCTTGAAAATGTAGAACTTATCGCCCTTAAACGTCTTTTCGAAAAGATTGAAGCCTTCCCAAGTCTACAAGGCAGTC
TTCAGAGCATCAATGACGGTGGTTTTATTGAGCATTTTGCTAGCCCTGAGTTGCAAAATATTCGTCGTCAACTCAAATCT
TGTGATGATGCCATTCGCCAGACCTTACAAGACATTCTCAAGAAATCTGGCCACATGTTGGCTGAGAGTTTGATTGCTAG
TCGTAACGGTCGTTCGGTGCTTCCTGTCAAAAACACCTACCGTAACCGTATTGCTGGAGTTGTGCATGACATCTCAAGCT
CTGGAAACACAGTATATATCGAGCCACGTGCCGTTATCCAGCTTAACGAAGAAATTACACAATTACGTGCAGACGAACGC
CACGAGATGGCTCGTATCCTGCATGAACTGTCTGAACAACTACGCCCACAAGCTGCTGCTATTGCTAACAACGCTTGGAT
TTTGGGCCACATGGACTTCATTCGAGGAAAATACCTCTATCTCCATGATAAAAAAGCGGTTATTCCAAAGATTAGTGACA
ACCAAACACTACAACTACTTAACGTTCGTCACCCTCTTTTGGTCAATCCTGTAGCTAACGATTTGCACTTTGATGAGGAC
CTCACGGCCATTGTCATTACAGGTCCCAATACTGGTGGTAAGACCGTCATGCTTAAAACGCTAGGACTAGCACAACTAAT
GGCTCAATCTGGTCTGCCAATTTTGGCTGATAAGGGCAGCCGTGTCGCCATTTTCCAAGAGATTTTTGCGGACATCGGAG
ACGAACAGTCTATCGAACAAAGTTTGTCAACTTTCTCTAGTCACATGACCCACATTGTTGAGATTCTGAATGCTGCCGAC
AGTAACAGTCTGGTCTTGGTCGATGAGCTTGGGGCTGGTACCGACCCTCAGGAAGGAGCTAGTCTAGCCATGGCAATCTT
AGAGCACCTCCGTTTAAGTCAGATTAAGACCATGGCTACCACTCACTATCCTGAGCTTAAGGCCTATGGGATTGAGACGC
AACATGTGGAAAATGCCAGCATGGAGTTTGACACAGCGACTTTAAGCCCTACCTATCGTTTTATGCAAGGGGTTCCTGGT
CGTTCTAATGCCTTTGAAATTGCTCGACGCCTCGGTTTGAATGAGATTATTGTCAAGGAGGCAGAAAACCTCACTGATAC
TGATAGTGATGTCAACCGTATCATCGAGCAACTTGAAGCCCAAACTGTGGAAACACAAAAACGTCTGGAACACATCAAGG
ACGTGGAGCAAGAGAACCTTAAATTCAACCGTGCGGTCAAGAAACTCTATAACGAATTCTCCCATGAATACGACAAGGAA
CTCGAAAAGGCTCAAAAAGAAATTCAAGAGATGGTTGATACCGCTTTGGCTGAGAGCAATAGTATTCTCAAAAATCTCCA
CGATAAGAGTCAACTCAAACCTCATGAAGTTATCGACGCCAAAGGAAAACTCAAGAAACTTGCCCCACAAGTGGACCTCT
CTAAGAATAAGGTCCTTCGTAAGGCTAAGAAAGAAAAGGCTGCGCGTGCCCCTCGTGTTGGAGATGATATCATCGTTACC
GCCTATGGGCAACGGGGTACCCTTACCAGTCAAGCCAAAAATGGTAACTGGGAAGCTCAGGTCGGTCTCATCAAGATGAC
CCTCAAGGCAGACGAATTCACTCTGGTTCGTGCCCAAGCTGAAGCCCAACAACCTAAGAAGAAACAGATTAACGTGGTTA
AAAAAGCCAAGAAGACATCTGGCGGTCCTCGTGCCCGTCTAGACCTTCGTGGGAAACGTTACGAAGAAGCTATGCAAGAG
CTTGATGCCTTTATTGACCAAGCCCTACTTAATAACATGAGTCAGGTGGACATCATCCACGGTATTGGTACAGGTGTCAT
CCGTGATGCTGTTACCAAATATCTCCGCCGTCATCGCCATGTTAAAAGTTTTGAATATGCCCCACAAAGTGCTGGTGGTT
CCGGATGTACCATTGCAACCTTAGGGTAA

Domains

Predicted by InterProScan.

MutS domain V (MutS_V)

(324-505)

MutS2 and Smr-associated SH3 domain (MSSS)

(633-672)

Smr domain (Smr)

(707-781)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.596

100

0.402

Multiple sequence alignment