Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   ACLIMA_RS10805 Genome accession   NZ_CP177039
Coordinates   2097695..2099518 (+) Length   607 a.a.
NCBI ID   WP_003182492.1    Uniprot ID   Q65IR0
Organism   Bacillus licheniformis strain MPB04     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2092695..2104518
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLIMA_RS10790 (ACLIMA_10790) - 2093787..2095361 (+) 1575 WP_009328119.1 alkaline phosphatase family protein -
  ACLIMA_RS10795 (ACLIMA_10795) - 2095501..2095974 (+) 474 WP_009328118.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACLIMA_RS10800 (ACLIMA_10800) rcrP 2095971..2097698 (+) 1728 WP_003182490.1 ABC transporter ATP-binding protein Regulator
  ACLIMA_RS10805 (ACLIMA_10805) rcrQ 2097695..2099518 (+) 1824 WP_003182492.1 ABC transporter ATP-binding protein Regulator
  ACLIMA_RS10810 (ACLIMA_10810) - 2099752..2100966 (+) 1215 WP_003182494.1 cytochrome P450 -
  ACLIMA_RS10815 (ACLIMA_10815) - 2101015..2101731 (-) 717 WP_003182496.1 3-ketoacyl-ACP reductase -

Sequence

Protein


Download         Length: 607 a.a.        Molecular weight: 67289.69 Da        Isoelectric Point: 6.8800

>NTDB_id=969202 ACLIMA_RS10805 WP_003182492.1 2097695..2099518(+) (rcrQ) [Bacillus licheniformis strain MPB04]
MSQQPKHHGSIPKGMHKTKPKEFKKTLLRLARYLKPRTFQLVLVVFAAILATLFNVISPKLLGDATSSLFASFKEGTGVQ
FGFLGRITLILAGLYLLSALFTFLQHYLMAGVAQKTIYEMRQEVNEKLTRLPLKYYDKHSHGDTLSRAVNDIDNINTSLQ
QALTQMITSVITIVGIIVMMLLISPVLTLVVFITVPLSMLAVRFIASFSQKHFAAQQKELGDINGHVEEMFTGHQEVKAF
GHEEKAIQQFDEVNERLYQSGWKAQFISGLMMPMMTFIGNLGYVFVSITGGIFVLNGTLLIGGVQAFIQYTQQFSQPLVQ
AAGIANTIQSAIASAERVFSLLDEEEETGETPASIDTGKLKGDVSFEHVAFGYDKNVPVIRDLSLHAKEGQTIAIVGPTG
AGKTTIINLLMRFYELNKGSIKVGGTDISELSREQARSMFAMVLQDTWLFNGTIRENIAYGREGATEEDIIRAAKGAYAD
DFIRTLPDGYDTVLGEDAQNISQGQRQLLTIARAILADPKILILDEATSSVDTRTEMNIQKAMNKLMANRTSFVIAHRLS
TIKDADMILVMKNGDIIEKGSHEELLRKNGFYADLYNSQFSREEAVS

Nucleotide


Download         Length: 1824 bp        

>NTDB_id=969202 ACLIMA_RS10805 WP_003182492.1 2097695..2099518(+) (rcrQ) [Bacillus licheniformis strain MPB04]
ATGAGCCAACAACCAAAGCATCACGGCTCTATACCCAAAGGAATGCACAAGACAAAACCGAAAGAATTTAAAAAGACCCT
TTTGAGATTGGCCCGCTATTTAAAACCGCGGACCTTCCAGCTGGTGCTCGTTGTCTTCGCTGCAATATTGGCGACATTAT
TTAATGTCATCAGTCCAAAACTTCTCGGGGACGCGACCTCTTCCCTTTTCGCAAGCTTTAAAGAAGGCACCGGTGTTCAA
TTCGGCTTTCTCGGCCGGATCACGCTGATCCTGGCAGGATTGTATCTGCTTTCTGCTTTGTTTACGTTCTTGCAGCATTA
CCTGATGGCCGGGGTAGCCCAGAAAACGATATACGAAATGCGCCAGGAAGTGAATGAAAAGCTGACGCGGCTCCCTTTAA
AGTACTATGACAAGCATTCGCACGGCGACACGCTCAGCCGCGCCGTCAATGATATCGACAATATCAATACGTCATTGCAG
CAGGCGCTGACGCAAATGATTACGTCTGTCATTACAATAGTCGGAATCATCGTCATGATGCTTTTGATCAGCCCTGTGCT
GACGCTCGTCGTCTTCATCACGGTCCCGCTCAGCATGCTGGCCGTCCGATTCATTGCCTCATTTTCGCAGAAACACTTCG
CCGCGCAGCAAAAAGAACTCGGCGACATCAACGGACACGTTGAAGAAATGTTTACGGGGCATCAGGAAGTAAAGGCATTC
GGGCATGAAGAAAAAGCGATTCAGCAATTCGATGAAGTAAATGAGCGTCTTTACCAGTCAGGCTGGAAAGCGCAGTTTAT
TTCCGGTCTGATGATGCCGATGATGACATTCATCGGCAACCTCGGCTATGTGTTTGTCAGCATAACCGGCGGTATTTTCG
TTCTTAACGGCACCCTTTTGATCGGAGGCGTGCAGGCTTTTATCCAATATACGCAGCAATTTTCCCAGCCGCTCGTTCAA
GCTGCCGGAATCGCGAATACAATCCAATCGGCAATCGCATCCGCCGAAAGGGTGTTCAGTCTTTTGGACGAAGAAGAAGA
AACCGGGGAGACGCCGGCTTCCATCGATACCGGCAAATTAAAAGGCGATGTATCGTTTGAACATGTCGCCTTCGGTTATG
ATAAAAACGTTCCGGTCATCCGCGACTTAAGCCTTCACGCCAAAGAAGGCCAGACGATTGCGATCGTCGGACCGACCGGC
GCTGGAAAAACGACGATCATCAATTTGCTGATGCGTTTTTATGAACTAAACAAAGGCAGCATCAAGGTCGGCGGCACAGA
TATCAGCGAGCTGTCGCGCGAACAGGCGAGAAGCATGTTTGCGATGGTGTTACAGGACACATGGCTGTTCAACGGCACCA
TCCGGGAAAACATCGCTTACGGGCGTGAAGGCGCGACCGAAGAAGACATCATCAGAGCGGCAAAAGGCGCCTATGCCGAC
GATTTTATCCGCACCTTGCCGGACGGCTATGATACGGTACTTGGCGAAGATGCCCAAAACATCTCGCAAGGGCAACGGCA
GCTCTTAACGATCGCGAGAGCCATTTTAGCTGATCCGAAGATTTTAATATTAGATGAAGCGACAAGCAGTGTCGACACCC
GGACGGAAATGAATATTCAAAAAGCGATGAACAAACTGATGGCCAACCGTACGAGCTTTGTTATCGCCCACCGTCTTTCT
ACCATTAAAGATGCCGACATGATTCTTGTGATGAAAAACGGAGATATTATTGAAAAAGGCAGCCACGAAGAGCTGCTCCG
CAAGAACGGATTTTATGCCGATTTGTATAACAGCCAGTTCTCCCGGGAAGAAGCCGTCAGCTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(42-318)

ABC transporter (ABC_tran)

(381-529)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q65IR0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

46.655

96.046

0.448