Detailed information NTG0969182

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: ACLIMA_RS08920
• Genome accession: NZ_CP177039
• Coordinates: 1721058..1723475 (+)
• Length: 805 a.a.
• NCBI ID: WP_017474812.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain MPB04
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1716058..1728475

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLIMA_RS08895 (ACLIMA_08895)	-	1717717..1718592 (+)	876	WP_003181655.1	YicC/YloC family endoribonuclease	-
ACLIMA_RS08900 (ACLIMA_08900)	remA	1718668..1718937 (+)	270	WP_003181657.1	extracellular matrix/biofilm regulator RemA	-
ACLIMA_RS08905 (ACLIMA_08905)	gmk	1718945..1719559 (+)	615	WP_003181659.1	guanylate kinase	-
ACLIMA_RS08910 (ACLIMA_08910)	rpoZ	1719562..1719762 (+)	201	WP_003181661.1	DNA-directed RNA polymerase subunit omega	-
ACLIMA_RS08915 (ACLIMA_08915)	coaBC	1719844..1721061 (+)	1218	WP_003181663.1	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	-
ACLIMA_RS08920 (ACLIMA_08920)	priA	1721058..1723475 (+)	2418	WP_017474812.1	primosomal protein N'	Machinery gene
ACLIMA_RS08925 (ACLIMA_08925)	def	1723505..1723987 (+)	483	WP_009328532.1	peptide deformylase	-
ACLIMA_RS08930 (ACLIMA_08930)	fmt	1723992..1724942 (+)	951	WP_003181670.1	methionyl-tRNA formyltransferase	-
ACLIMA_RS08935 (ACLIMA_08935)	rsmB	1724932..1726278 (+)	1347	WP_003181671.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
ACLIMA_RS08940 (ACLIMA_08940)	rlmN	1726278..1727363 (+)	1086	WP_003181673.1	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	-
ACLIMA_RS08945 (ACLIMA_08945)	-	1727371..1728135 (+)	765	WP_026699225.1	Stp1/IreP family PP2C-type Ser/Thr phosphatase	-

Sequence

Protein

• Length: 805 a.a.
• Molecular weight: 91288.57 Da
• Isoelectric Point: 8.8480

>NTDB_id=969182 ACLIMA_RS08920 WP_017474812.1 1721058..1723475(+) (priA) [Bacillus licheniformis strain MPB04]
MNFAEVIVDVTTKNIDRPFDYRIPDKFKGMIKKGMRVIVPFGARKIQGFVTSVKESSELAGRSVKDIEDILDLAPVLTEE
LLELSDWLTEKTLSFKITALQAMLPAAMKAKYGKEIKVIGDKPLPEPLKTLFSQKETLSYSDINDHGTLKLIQRQVQEGN
LEVAYKVKQKTNKKMRRMIAPLCAKEHLKEALAGLSPQAVKQKAILQFFIDRKEGGAVPAKDLIDKTGGSSASLKALIDK
GLLKESEEEVYRDPYQDRMFKKTEPLPLTEEQAQAYEAIADAIEEKRHDVFLLHGVTGSGKTEVYLQSIEKVLEAGKEAI
VLVPEISLTPQMVNRFKGRFGSQVAVLHSGLSTGEKYDEWRKIHRKEVRLVVGARSAIFAPFENLGMIIIDEEHETSYKQ
EEMPRYHAKEAAIQRAEYHQCPVVLGSATPTLESFARAKKGVYKLLSLKHRVNHQVMPDVSLVDMREELRSGNRSMFSKD
LMAGLEETLEKGEQAVLFLNKRGYSSFVMCRDCGYVIQCPHCEISLTYHRYGQRLKCHYCGYETGMPSSCPECGSEHIRY
FGTGTQRVEEELTKVLPAARVIRMDVDTTSRKGAHEKLLTSFGRGEADILLGTQMIAKGLDFENVTLVGVLSADTMLHIP
DFRAAEKTFQLMTQVSGRAGRHEKPGKVIIQTYTPSHYSIQLTKTHDYETFFRQEMLHRREQAYPPYYYLALVSVSHEEV
TKAALVTEKIATYLKKNISSEAKILGPVASPIARIKDRYRYQCVIKYKQENQLTSLLKNIMDHYKRDIEQKQLAISIDMN
PYMMM

Nucleotide

• Length: 2418 bp

>NTDB_id=969182 ACLIMA_RS08920 WP_017474812.1 1721058..1723475(+) (priA) [Bacillus licheniformis strain MPB04]
ATGAACTTCGCTGAAGTGATCGTCGATGTTACAACGAAAAATATCGACAGACCGTTTGATTACCGCATCCCCGACAAATT
CAAAGGTATGATTAAAAAAGGGATGCGCGTGATCGTTCCGTTCGGCGCCCGCAAAATCCAGGGATTTGTCACCAGCGTGA
AAGAATCGTCGGAGCTTGCCGGCCGTTCGGTTAAGGATATCGAGGATATCCTTGATCTGGCGCCCGTTTTGACGGAGGAG
CTGCTTGAGCTGTCAGACTGGCTGACAGAAAAAACACTTTCTTTTAAAATTACGGCTTTGCAGGCGATGCTCCCCGCGGC
TATGAAAGCAAAATACGGCAAAGAAATCAAGGTGATCGGCGATAAACCGCTTCCCGAACCGCTAAAAACCTTGTTCTCGC
AAAAAGAGACGCTTTCTTATTCCGATATAAATGACCACGGAACATTAAAGCTGATTCAGCGCCAGGTTCAAGAAGGCAAT
CTTGAAGTGGCGTATAAAGTAAAGCAGAAAACAAACAAAAAAATGCGGAGAATGATCGCCCCCCTTTGCGCGAAAGAACA
TTTAAAAGAAGCGCTTGCCGGCCTCTCTCCGCAAGCTGTCAAACAAAAAGCGATCCTTCAGTTTTTCATCGACCGCAAAG
AGGGCGGCGCTGTTCCGGCAAAGGATCTGATCGACAAAACGGGGGGCTCTTCCGCGTCCTTGAAAGCGCTCATCGACAAG
GGGCTGTTAAAGGAAAGCGAAGAGGAGGTTTACAGGGATCCTTATCAGGACAGAATGTTCAAAAAAACCGAACCGCTTCC
GCTGACTGAAGAGCAGGCGCAGGCCTACGAGGCGATAGCGGATGCAATCGAAGAAAAGCGGCACGATGTGTTTCTTCTTC
ACGGAGTGACCGGAAGCGGAAAAACGGAAGTCTATCTGCAATCGATCGAAAAGGTGCTGGAAGCCGGCAAAGAAGCGATC
GTTCTCGTTCCGGAAATTTCCCTGACGCCGCAGATGGTCAACCGCTTTAAAGGGCGCTTTGGCTCGCAGGTAGCCGTACT
GCACAGCGGGCTTTCAACAGGAGAAAAATATGATGAATGGCGGAAAATCCACCGCAAAGAAGTCCGGCTTGTCGTCGGGG
CGCGCTCGGCGATTTTCGCGCCGTTTGAAAATCTCGGCATGATTATAATTGATGAAGAGCACGAAACATCGTACAAGCAG
GAGGAGATGCCGAGATACCATGCGAAAGAAGCGGCGATTCAAAGGGCCGAATACCACCAGTGTCCGGTCGTGCTCGGCAG
TGCGACGCCGACGCTCGAATCGTTCGCGAGGGCGAAAAAAGGCGTGTACAAGCTTCTTTCTCTCAAGCACCGCGTCAATC
ACCAAGTCATGCCCGACGTGTCTCTCGTCGATATGAGAGAGGAACTGCGCAGCGGAAACCGCTCGATGTTTTCCAAAGAC
TTAATGGCCGGGCTTGAGGAAACTCTTGAAAAAGGAGAGCAGGCCGTTCTGTTTTTAAACAAAAGAGGCTATTCCTCATT
TGTCATGTGCAGGGACTGCGGATATGTCATCCAGTGCCCTCATTGTGAAATTTCATTGACGTACCACAGGTATGGACAGC
GTCTGAAGTGCCATTACTGCGGCTATGAAACCGGCATGCCGTCAAGCTGCCCCGAATGCGGAAGCGAGCATATCCGCTAC
TTTGGTACAGGCACACAGCGGGTCGAAGAAGAATTGACGAAGGTTCTGCCGGCTGCAAGGGTGATCCGCATGGATGTCGA
TACAACCTCAAGAAAGGGAGCGCATGAAAAGCTGCTCACATCCTTTGGTAGAGGCGAAGCCGATATCCTGCTTGGAACGC
AGATGATCGCCAAAGGGCTCGATTTCGAAAACGTCACGCTCGTCGGTGTCTTGAGCGCGGATACGATGCTTCACATCCCC
GATTTCAGAGCCGCTGAAAAAACGTTCCAGCTGATGACGCAGGTGAGCGGAAGAGCGGGGCGCCACGAAAAGCCGGGCAA
GGTGATCATTCAGACGTACACACCTTCCCATTACAGCATTCAGCTCACAAAAACGCATGATTATGAAACATTCTTCAGGC
AGGAGATGCTGCACAGAAGGGAACAGGCCTATCCTCCATATTATTATTTGGCGCTGGTCAGCGTATCGCACGAGGAAGTG
ACGAAGGCGGCACTCGTGACTGAAAAAATCGCCACCTATTTAAAAAAGAACATTTCAAGCGAGGCGAAGATTCTCGGCCC
TGTCGCATCGCCGATCGCCAGGATCAAAGATAGATATCGCTATCAATGCGTGATAAAATACAAACAGGAAAACCAGCTTA
CATCGTTGCTTAAAAACATTATGGATCATTACAAACGAGACATTGAACAAAAGCAATTGGCGATTTCGATCGACATGAAT
CCATATATGATGATGTAA

Domains

Predicted by InterProScan.

• Primosomal protein N C-terminal domain (PriA_C) (706-801)

• 3DNA-binding domain (3BD) (PriA_3primeBD) (5-105)

• Type III restriction enzyme, res subunit (ResIII) (267-431)

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (519-543)

• Helicase conserved C-terminal domain (Helicase_C) (578-662)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Bacillus subtilis subsp. subtilis str. 168	79.13	100	0.791