Detailed information NTG0968995

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ACK3C0_RS07035
• Genome accession: NZ_CP176810
• Coordinates: 1519452..1520741 (-)
• Length: 429 a.a.
• NCBI ID: WP_225621832.1
• Uniprot ID: -
• Organism: Xylella fastidiosa subsp. multiplex strain IAS-AXF64H11
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1514452..1525741

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACK3C0_RS07015 (ACK3C0_07015)	-	1515329..1516066 (+)	738	WP_004083738.1	pteridine reductase	-
ACK3C0_RS07020 (ACK3C0_07020)	folK	1516077..1516592 (-)	516	WP_031345731.1	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	-
ACK3C0_RS07025 (ACK3C0_07025)	-	1516718..1518214 (-)	1497	WP_128283905.1	sensor histidine kinase	-
ACK3C0_RS07030 (ACK3C0_07030)	crcB	1518890..1519291 (-)	402	WP_004083741.1	fluoride efflux transporter CrcB	-
ACK3C0_RS07035 (ACK3C0_07035)	rarA	1519452..1520741 (-)	1290	WP_225621832.1	replication-associated recombination protein A	Machinery gene
ACK3C0_RS07040 (ACK3C0_07040)	lolA	1520972..1521598 (-)	627	WP_049756311.1	outer membrane lipoprotein chaperone LolA	-
ACK3C0_RS07045 (ACK3C0_07045)	-	1522161..1524071 (-)	1911	WP_004083744.1	DUF3857 domain-containing transglutaminase family protein	-

Sequence

Protein

• Length: 429 a.a.
• Molecular weight: 47824.50 Da
• Isoelectric Point: 6.3540

>NTDB_id=968995 ACK3C0_RS07035 WP_225621832.1 1519452..1520741(-) (rarA) [Xylella fastidiosa subsp. multiplex strain IAS-AXF64H11]
MRPRTLHEMVGQKRLLAPDRALHRAVASGNVHSMILWGPPGCGKTTLSLLLAHYIDAEFRAVSAVLSGLPEVRQILAEAA
QRFSEGRRTVLFVDEVHRFNKMQQDAFLPHIERGSIIFVGATTENPSFELNSALLSRCRVHVLEAVSSQDIVVALQRALQ
DTERGLGGQKIEVSEASLLEIAKAADGDVRRALTLLEIAAELAQDEDEQITADLLSQVLADRSRRFDKRGEQFYDQISAL
HKSVRSSNPDAALYWLLRMLDGGCDPIYLARRLTRMAIEDIGLADPRAQSMALEAWDIYERLGSPEGDLAFAQLVLYLAS
TAKSNAGYVAFNVAKEDIRQTGTQDVPLHLRNAPTRLMKSLGYGIEYQYDHDAENGVALEQTCFPDALGERIYYQPVSRG
LEIKLKEKLDWLRAARAQIQADKPQRPRA

Nucleotide

• Length: 1290 bp

>NTDB_id=968995 ACK3C0_RS07035 WP_225621832.1 1519452..1520741(-) (rarA) [Xylella fastidiosa subsp. multiplex strain IAS-AXF64H11]
ATGCGTCCTCGTACTCTTCATGAGATGGTAGGACAGAAGCGCTTGCTTGCCCCAGATCGTGCATTGCATCGTGCGGTGGC
TTCCGGGAATGTGCATTCCATGATTTTGTGGGGACCGCCAGGGTGCGGCAAGACGACATTGTCATTGCTGTTAGCGCATT
ACATTGATGCAGAATTTCGGGCAGTCTCGGCTGTTCTTTCGGGGTTGCCGGAGGTGCGTCAGATCTTGGCTGAGGCTGCG
CAGCGTTTTTCTGAAGGACGCCGCACCGTCTTGTTCGTGGACGAAGTGCATCGTTTTAACAAGATGCAGCAGGATGCGTT
TCTGCCGCATATCGAGCGTGGTTCCATTATTTTCGTTGGTGCCACTACTGAGAATCCATCCTTCGAATTGAACTCGGCGT
TACTGTCGCGTTGCCGTGTCCACGTGTTGGAGGCAGTGTCGTCACAGGATATCGTTGTGGCATTGCAGCGGGCGTTGCAG
GATACGGAGCGGGGTTTGGGTGGGCAGAAGATTGAAGTGTCTGAAGCCTCTCTGTTGGAGATTGCCAAGGCTGCAGATGG
TGACGTGCGTCGTGCGCTCACCTTGTTGGAGATTGCTGCTGAGCTTGCCCAGGATGAGGATGAGCAGATAACCGCTGACT
TGCTTTCGCAAGTGCTTGCCGATCGTAGTCGGCGCTTCGACAAACGGGGGGAGCAGTTCTATGACCAGATTTCGGCCTTG
CACAAGAGTGTACGTAGTTCCAACCCGGATGCGGCATTGTATTGGTTGCTGCGTATGCTGGATGGTGGTTGTGATCCTAT
CTACTTGGCCCGGCGCTTGACCCGCATGGCGATTGAGGATATCGGTTTGGCTGATCCGCGTGCACAGTCGATGGCTCTGG
AGGCTTGGGACATCTATGAGCGGTTGGGTAGCCCGGAGGGAGATCTGGCGTTCGCGCAGTTGGTGCTGTACTTGGCAAGT
ACAGCAAAATCGAATGCTGGCTATGTTGCGTTCAATGTGGCCAAGGAGGACATTCGCCAGACGGGTACTCAGGATGTTCC
GCTACATCTGCGCAATGCACCGACCAGACTCATGAAAAGTCTCGGTTACGGTATCGAGTATCAGTACGATCATGATGCTG
AGAACGGTGTTGCGCTGGAACAGACTTGTTTTCCCGATGCGCTGGGGGAGCGTATTTACTACCAACCGGTATCCCGCGGT
CTGGAGATTAAGCTGAAGGAGAAGTTGGACTGGTTGCGTGCAGCACGTGCTCAGATTCAAGCGGATAAGCCGCAGCGGCC
GCGTGCATAG

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (247-412)

• AAA C-terminal domain (AAA_assoc_2) (168-245)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (1-120)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	38.462	96.97	0.373