Detailed information NTG0968048

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ACK2V4_RS05410
• Genome accession: NZ_CP176646
• Coordinates: 1153178..1154467 (+)
• Length: 429 a.a.
• NCBI ID: WP_043043278.1
• Uniprot ID: -
• Organism: Vibrio parahaemolyticus strain GTVSS-031
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1148178..1159467

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACK2V4_RS05395 (ACK2V4_05395)	lrp	1148677..1149171 (+)	495	WP_005378234.1	leucine-responsive transcriptional regulator Lrp	-
ACK2V4_RS05400 (ACK2V4_05400)	-	1149324..1152410 (+)	3087	WP_005495766.1	DNA translocase FtsK	-
ACK2V4_RS05405 (ACK2V4_05405)	lolA	1152485..1153111 (+)	627	WP_062855101.1	outer membrane lipoprotein chaperone LolA	-
ACK2V4_RS05410 (ACK2V4_05410)	rarA	1153178..1154467 (+)	1290	WP_043043278.1	replication-associated recombination protein A	Machinery gene
ACK2V4_RS05415 (ACK2V4_05415)	serS	1154559..1155866 (+)	1308	WP_005495761.1	serine--tRNA ligase	-
ACK2V4_RS05420 (ACK2V4_05420)	-	1155952..1156938 (+)	987	WP_062855102.1	peptidoglycan-binding domain-containing protein	-
ACK2V4_RS05425 (ACK2V4_05425)	-	1156938..1157651 (+)	714	WP_025521172.1	hypothetical protein	-
ACK2V4_RS05430 (ACK2V4_05430)	-	1157792..1158058 (+)	267	WP_062855103.1	DksA/TraR family C4-type zinc finger protein	-
ACK2V4_RS05435 (ACK2V4_05435)	bioA	1158128..1159408 (-)	1281	WP_025627424.1	adenosylmethionine--8-amino-7-oxononanoate transaminase	-

Sequence

Protein

• Length: 429 a.a.
• Molecular weight: 47621.81 Da
• Isoelectric Point: 5.8544

>NTDB_id=968048 ACK2V4_RS05410 WP_043043278.1 1153178..1154467(+) (rarA) [Vibrio parahaemolyticus strain GTVSS-031]
MRPQTIEQYIGQQHILGPGKPLRRALEAGHVHSMILWGPPGTGKTTLAEVAANYANAEVERVSAVTSGVKEIRAAIEKAR
ENKMAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTVTFIGATTENPSFELNNALLSRARVYKLTSLDKEEISLALNQAIN
DKERGLGNTPANFADNVLDRLAELVNGDARMSLNYLELLYDMAEENDQGEKEITLKLLAEVAGEKVSRFDNKGDIWYDLI
SAVHKSIRGSNPDAALYWAARMIAAGCDPLYIARRLLAIASEDVGNADPRAMQVALSAWDCFTRVGPAEGERAIAQAIVY
LACAPKSNAVYVAWKQALTDAHNLPEYEVPHHLRNAPTSLMKDMGYGAEYRYAHDEPGAYAAGEQYLPPEMADRKYYQPT
NRGLETKIGEKLDYLAKLDANSQQKRYEK

Nucleotide

• Length: 1290 bp

>NTDB_id=968048 ACK2V4_RS05410 WP_043043278.1 1153178..1154467(+) (rarA) [Vibrio parahaemolyticus strain GTVSS-031]
ATGAGACCGCAAACTATTGAGCAGTACATCGGTCAGCAACACATTCTTGGCCCGGGTAAACCCCTGCGTCGCGCGTTAGA
GGCTGGCCATGTCCACTCAATGATCCTTTGGGGGCCTCCTGGTACAGGTAAAACCACGTTAGCGGAAGTCGCTGCTAATT
ACGCCAATGCGGAAGTTGAACGCGTGTCTGCGGTGACGTCCGGTGTGAAAGAGATTCGTGCTGCAATCGAAAAAGCGCGC
GAGAACAAAATGGCGGGTCGCCGCACCATCTTGTTTGTGGATGAGGTCCATCGCTTCAACAAATCGCAACAAGATGCGTT
CTTACCACATATTGAAGATGGAACCGTAACGTTTATTGGCGCAACGACAGAGAACCCGTCTTTCGAACTGAACAACGCAT
TGTTGTCTCGTGCTCGAGTCTACAAGCTGACTTCACTGGATAAAGAAGAGATCTCACTCGCACTAAATCAAGCGATTAAC
GACAAAGAACGAGGGCTGGGCAATACGCCAGCGAACTTTGCTGATAATGTGTTAGACCGTCTAGCCGAGTTGGTGAACGG
TGATGCTCGCATGTCTCTTAACTACCTTGAGCTTCTCTACGATATGGCAGAAGAGAATGATCAAGGTGAAAAAGAGATAA
CACTCAAACTGCTTGCTGAAGTAGCCGGGGAGAAAGTCTCTCGCTTCGATAATAAAGGCGACATTTGGTACGATTTGATC
TCCGCAGTGCACAAATCTATTCGTGGATCAAACCCAGATGCCGCTTTGTATTGGGCTGCTCGTATGATAGCTGCAGGTTG
TGATCCACTTTACATTGCCCGCCGGTTACTTGCGATAGCATCGGAAGATGTCGGCAATGCGGACCCTAGAGCGATGCAAG
TTGCTCTTTCCGCGTGGGACTGCTTTACACGCGTTGGTCCAGCTGAAGGTGAGCGTGCGATTGCTCAAGCAATTGTTTAT
CTCGCGTGCGCTCCAAAGAGTAATGCCGTTTATGTTGCTTGGAAACAAGCGCTCACTGACGCACATAACTTGCCTGAATA
TGAAGTGCCGCATCACTTGCGTAATGCACCCACCAGTCTGATGAAAGACATGGGCTATGGCGCAGAATATCGATATGCTC
ACGACGAGCCGGGTGCTTATGCTGCGGGTGAGCAATATTTGCCACCAGAAATGGCAGATCGTAAGTACTATCAGCCGACA
AATCGCGGCCTAGAAACCAAAATCGGCGAAAAGTTAGATTACTTGGCTAAATTAGACGCAAATAGCCAACAAAAGCGCTA
TGAAAAGTAG

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (169-248)

• MgsA AAA+ ATPase C terminal (MgsA_C) (249-415)

• ATPase family associated with various cellular activities (AAA) (AAA) (34-139)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.474	97.436	0.385