Detailed information    

insolico Bioinformatically predicted

Overview


Name   recJ   Type   Machinery gene
Locus tag   MKY17_RS19690 Genome accession   NZ_CP150254
Coordinates   4094325..4096700 (-) Length   791 a.a.
NCBI ID   WP_339200448.1    Uniprot ID   -
Organism   Peribacillus sp. FSL P2-0133     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4089325..4101700
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY17_RS19675 (MKY17_19675) dtd 4090845..4091288 (-) 444 WP_098369662.1 D-aminoacyl-tRNA deacylase -
  MKY17_RS19680 (MKY17_19680) - 4091304..4093502 (-) 2199 WP_098369661.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase -
  MKY17_RS19685 (MKY17_19685) - 4093822..4094334 (-) 513 WP_061464220.1 adenine phosphoribosyltransferase -
  MKY17_RS19690 (MKY17_19690) recJ 4094325..4096700 (-) 2376 WP_339200448.1 single-stranded-DNA-specific exonuclease RecJ Machinery gene
  MKY17_RS19695 (MKY17_19695) secDF 4096846..4099107 (-) 2262 WP_339200449.1 protein translocase subunit SecDF -
  MKY17_RS19700 (MKY17_19700) - 4099304..4099609 (-) 306 WP_179890971.1 post-transcriptional regulator -
  MKY17_RS19705 (MKY17_19705) spoVB 4099780..4101342 (+) 1563 WP_098369657.1 stage V sporulation protein B -

Sequence


Protein


Download         Length: 791 a.a.        Molecular weight: 89138.56 Da        Isoelectric Point: 4.8313

>NTDB_id=968026 MKY17_RS19690 WP_339200448.1 4094325..4096700(-) (recJ) [Peribacillus sp. FSL P2-0133]
MLKPKTRWNLRTADENKVAVLAEELHITPLVAALLVNRGLDTIESARSFLFVKNQTFHDPFLLKDMDKAVYRIREAIQNG
EKIRIFGDYDADGVTSTTVMMTALTRLGADVDFYIPNRFTEGYGPNPMAFRLAAEQGVKVLITVDTGISAVDEAKLAGEL
GMDYILTDHHEPGPELPEALAIIHPKLEDSSYPFKELAGVGVAFKLAHALLGELPEDLLEIAAIGTIADLVPLQGENRVI
AAKGIEQLRLTRRPGLVALMKVANVQQEALNEESIGFAMAPRINAVGRLGDADPAVDLLMSQSLEEATELANEINDINKE
RQEMVAAMAEEAIAEVEENYPPESNGVLIIGREGWNAGVVGIVASKLVERFYRPTIVLSYDREKGLAKGSARSIAGFDLF
QSLSACREMLPHFGGHPMAAGMTLKIEDVQELRDRMNLIAKEQLNEEDFTPITNLDGATTLAEVSIQTIQEMSLLAPFGV
TNPKPKILIDSVQLSSVRKIGANQNHLKVQLEDGENHKLDGVGFGLGHFVDEIAPHAEVSVIGELSINEWNNMKKPQIFV
QDVSVNHWQLFDYRGKGQAEKWLADIPVQNRKIVIFSEDIYRRYPFLQNHPDLVHIKNELDAEQLDCFEGHLAFMDMPPS
REYLKRVIANKNPSRIYAHFSHEQDHFLSTMPTRDHFKWFYAFLAKKGPLDVKRYGDDLAKYRGWSRDTVEFISKVFFEL
DFVTIENGLIMLTTNAKKRDLSESESYTRKKEQFELEQELVYSSYQQLFDWFNHYLVHEATDLEEETKQWI

Nucleotide


Download         Length: 2376 bp        

>NTDB_id=968026 MKY17_RS19690 WP_339200448.1 4094325..4096700(-) (recJ) [Peribacillus sp. FSL P2-0133]
ATGTTAAAGCCAAAAACCCGGTGGAACTTACGAACTGCCGATGAAAACAAAGTTGCTGTACTAGCTGAAGAGCTTCATAT
AACACCTTTGGTTGCAGCCCTGCTTGTGAATCGAGGCCTGGATACGATTGAAAGTGCCCGATCATTTTTATTTGTAAAAA
ATCAAACTTTTCATGATCCATTTTTATTGAAGGATATGGATAAAGCAGTATATAGAATAAGAGAAGCGATTCAAAATGGA
GAAAAAATACGTATATTCGGTGATTATGATGCGGATGGCGTGACATCGACGACAGTGATGATGACGGCGCTGACGAGATT
GGGGGCCGATGTTGACTTTTATATCCCGAATCGGTTTACAGAAGGATATGGTCCGAATCCGATGGCATTCCGCCTTGCAG
CCGAGCAAGGGGTGAAGGTATTAATAACCGTCGATACCGGAATTTCTGCAGTCGATGAAGCGAAACTTGCCGGCGAGCTT
GGCATGGATTATATTTTGACCGACCACCATGAACCGGGACCGGAACTGCCTGAGGCATTGGCAATCATCCATCCTAAACT
TGAGGACAGTTCCTATCCATTTAAAGAGCTTGCCGGAGTAGGGGTCGCATTTAAGCTGGCACACGCCTTGCTTGGGGAAT
TGCCTGAGGATTTGCTTGAGATAGCGGCAATCGGCACGATAGCGGATTTAGTGCCTTTACAAGGGGAAAACCGCGTTATT
GCTGCGAAAGGCATCGAGCAGTTACGTTTGACGCGCCGCCCGGGACTTGTTGCCTTAATGAAAGTGGCGAATGTTCAGCA
GGAAGCATTGAATGAAGAATCGATCGGCTTTGCGATGGCACCGCGGATCAATGCTGTCGGGCGCCTTGGAGATGCCGATC
CTGCTGTCGATTTATTGATGTCACAAAGTCTGGAAGAAGCGACGGAACTTGCCAATGAAATCAATGATATCAATAAAGAG
CGACAGGAAATGGTTGCGGCAATGGCGGAAGAAGCGATTGCTGAAGTCGAGGAAAACTACCCGCCGGAGTCCAATGGAGT
GCTCATCATCGGCAGGGAAGGCTGGAACGCCGGAGTTGTGGGGATTGTGGCCTCTAAACTTGTTGAACGCTTTTACCGGC
CGACGATTGTATTGAGTTATGACCGGGAAAAGGGATTAGCTAAAGGTTCTGCTCGGAGCATCGCCGGTTTCGATCTATTT
CAAAGTCTTTCCGCCTGCCGTGAAATGCTGCCTCATTTCGGTGGACATCCGATGGCTGCTGGAATGACCTTGAAAATTGA
AGATGTTCAGGAGCTCAGGGACCGCATGAACTTGATTGCGAAGGAACAACTGAACGAAGAGGACTTCACACCCATTACAA
ACTTGGACGGGGCAACGACTTTAGCTGAAGTTTCCATTCAAACGATTCAGGAAATGAGCTTGCTGGCGCCATTTGGGGTT
ACGAATCCTAAGCCGAAGATATTGATAGATTCCGTCCAGCTTTCAAGTGTCCGCAAAATTGGTGCCAACCAAAATCACTT
GAAGGTCCAGCTGGAAGATGGTGAAAATCATAAACTTGACGGCGTGGGCTTCGGTCTCGGTCATTTTGTCGATGAAATAG
CTCCGCACGCTGAAGTCTCGGTTATTGGTGAGCTTTCCATCAATGAGTGGAATAATATGAAAAAGCCCCAGATCTTTGTC
CAGGATGTCTCGGTAAACCATTGGCAGTTATTCGATTACCGCGGCAAGGGACAGGCAGAGAAGTGGCTTGCCGACATTCC
AGTACAAAACCGGAAGATCGTCATTTTCTCGGAAGATATTTATCGCAGATACCCATTTTTGCAAAACCATCCAGATCTTG
TTCATATCAAGAATGAACTGGATGCAGAGCAGCTCGACTGCTTCGAAGGTCATTTGGCATTTATGGACATGCCGCCGTCC
AGGGAATATTTGAAACGGGTGATTGCCAATAAGAACCCTTCGCGTATCTACGCTCACTTTTCCCATGAACAGGACCATTT
CTTAAGTACGATGCCAACAAGGGATCATTTTAAATGGTTCTATGCCTTCCTTGCCAAAAAGGGTCCGCTCGACGTGAAAA
GATATGGTGATGACCTGGCCAAATATCGCGGCTGGTCAAGAGATACCGTGGAATTCATTTCTAAGGTGTTTTTTGAGCTT
GATTTTGTTACAATAGAGAATGGGTTAATTATGCTCACAACCAATGCGAAAAAACGCGATCTCAGTGAATCTGAATCGTA
TACAAGAAAGAAAGAGCAATTTGAGCTTGAACAAGAGCTTGTTTATTCTTCCTATCAGCAATTATTCGATTGGTTCAATC
ATTATTTAGTTCATGAGGCAACAGACCTTGAGGAGGAAACAAAGCAATGGATTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recJ Bacillus subtilis subsp. subtilis str. 168

54.729

100

0.549


Multiple sequence alignment