Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | MKY43_RS12705 | Genome accession | NZ_CP150249 |
| Coordinates | 2466839..2467174 (+) | Length | 111 a.a. |
| NCBI ID | WP_025804940.1 | Uniprot ID | A0AB37GFT9 |
| Organism | Bacillus sp. FSL M8-0133 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2461839..2472174
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MKY43_RS12685 (MKY43_12685) | gcvT | 2462271..2463365 (-) | 1095 | WP_003183436.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| MKY43_RS12690 (MKY43_12690) | - | 2463958..2465637 (+) | 1680 | WP_003183439.1 | SNF2-related protein | - |
| MKY43_RS12695 (MKY43_12695) | - | 2465644..2466438 (+) | 795 | WP_003183441.1 | YqhG family protein | - |
| MKY43_RS12700 (MKY43_12700) | sinI | 2466629..2466805 (+) | 177 | WP_003183444.1 | anti-repressor SinI family protein | Regulator |
| MKY43_RS12705 (MKY43_12705) | sinR | 2466839..2467174 (+) | 336 | WP_025804940.1 | helix-turn-helix domain-containing protein | Regulator |
| MKY43_RS12710 (MKY43_12710) | - | 2467279..2468073 (-) | 795 | WP_003183447.1 | TasA family protein | - |
| MKY43_RS12715 (MKY43_12715) | - | 2468147..2468731 (-) | 585 | WP_003183449.1 | signal peptidase I | - |
| MKY43_RS12720 (MKY43_12720) | tapA | 2468728..2469456 (-) | 729 | WP_003183451.1 | amyloid fiber anchoring/assembly protein TapA | - |
| MKY43_RS12725 (MKY43_12725) | - | 2469766..2470053 (+) | 288 | WP_223307118.1 | YqzG/YhdC family protein | - |
| MKY43_RS12730 (MKY43_12730) | - | 2470077..2470259 (-) | 183 | WP_003183456.1 | YqzE family protein | - |
| MKY43_RS12735 (MKY43_12735) | comGG | 2470348..2470713 (-) | 366 | WP_003183459.1 | competence type IV pilus minor pilin ComGG | - |
| MKY43_RS12740 (MKY43_12740) | comGF | 2470726..2471214 (-) | 489 | WP_011201694.1 | competence type IV pilus minor pilin ComGF | - |
| MKY43_RS12745 (MKY43_12745) | comGE | 2471123..2471470 (-) | 348 | WP_009327907.1 | competence type IV pilus minor pilin ComGE | - |
| MKY43_RS12750 (MKY43_12750) | comGD | 2471454..2471891 (-) | 438 | WP_009327905.1 | competence type IV pilus minor pilin ComGD | - |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12991.60 Da Isoelectric Point: 5.9495
>NTDB_id=967701 MKY43_RS12705 WP_025804940.1 2466839..2467174(+) (sinR) [Bacillus sp. FSL M8-0133]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKDETEYDGQLDSEWEN
LVRDAMASGVSKKQFREFLDYQKWKRRQEKE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKDETEYDGQLDSEWEN
LVRDAMASGVSKKQFREFLDYQKWKRRQEKE
Nucleotide
Download Length: 336 bp
>NTDB_id=967701 MKY43_RS12705 WP_025804940.1 2466839..2467174(+) (sinR) [Bacillus sp. FSL M8-0133]
TTGATTGGCCAGCGTATTAAACAATATCGAAAAGAAAAAGGCTACTCACTATCTGAACTAGCTGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTAGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACCCTGCTCGATGAGAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAT
CTAGTTCGTGACGCTATGGCATCAGGGGTTTCTAAAAAACAATTTCGAGAATTTTTAGATTATCAAAAGTGGAAGAGAAG
ACAGGAAAAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATATCGAAAAGAAAAAGGCTACTCACTATCTGAACTAGCTGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTAGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACCCTGCTCGATGAGAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAT
CTAGTTCGTGACGCTATGGCATCAGGGGTTTCTAAAAAACAATTTCGAGAATTTTTAGATTATCAAAAGTGGAAGAGAAG
ACAGGAAAAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
92.793 |
100 |
0.928 |