Detailed information NTG0967683

Bioinformatically predicted

Overview

• Name: codY
• Type: Regulator
• Locus tag: ACKZ7V_RS09415
• Genome accession: NZ_CP176566
• Coordinates: 1884323..1885096 (+)
• Length: 257 a.a.
• NCBI ID: WP_000055337.1
• Uniprot ID: P63843
• Organism: Staphylococcus aureus strain IMT37083
• Function: repression of comK (predicted from homology) Competence regulation

Genomic Context

Location: 1879323..1890096

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACKZ7V_RS09395 (ACKZ7V_09395)	trmFO	1879667..1880974 (+)	1308	WP_111762223.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
ACKZ7V_RS09400 (ACKZ7V_09400)	xerC	1881391..1882287 (+)	897	WP_111762224.1	tyrosine recombinase XerC	-
ACKZ7V_RS09405 (ACKZ7V_09405)	hslV	1882284..1882829 (+)	546	WP_000072681.1	ATP-dependent protease subunit HslV	-
ACKZ7V_RS09410 (ACKZ7V_09410)	hslU	1882895..1884298 (+)	1404	WP_111762225.1	ATP-dependent protease ATPase subunit HslU	-
ACKZ7V_RS09415 (ACKZ7V_09415)	codY	1884323..1885096 (+)	774	WP_000055337.1	GTP-sensing pleiotropic transcriptional regulator CodY	Regulator
ACKZ7V_RS09420 (ACKZ7V_09420)	-	1885147..1885239 (+)	93	WP_031788481.1	hypothetical protein	-
ACKZ7V_RS09425 (ACKZ7V_09425)	rpsB	1885438..1886205 (+)	768	WP_111762226.1	30S ribosomal protein S2	-
ACKZ7V_RS09430 (ACKZ7V_09430)	-	1886239..1886352 (+)	114	WP_111762227.1	hypothetical protein	-
ACKZ7V_RS09435 (ACKZ7V_09435)	tsf	1886387..1887268 (+)	882	WP_000201387.1	translation elongation factor Ts	-
ACKZ7V_RS09440 (ACKZ7V_09440)	pyrH	1887405..1888127 (+)	723	WP_000057330.1	UMP kinase	-
ACKZ7V_RS09445 (ACKZ7V_09445)	frr	1888146..1888700 (+)	555	WP_001280006.1	ribosome recycling factor	-
ACKZ7V_RS09450 (ACKZ7V_09450)	-	1889073..1889843 (+)	771	WP_111762228.1	isoprenyl transferase	-

Sequence

Protein

• Length: 257 a.a.
• Molecular weight: 28755.13 Da
• Isoelectric Point: 6.0680

>NTDB_id=967683 ACKZ7V_RS09415 WP_000055337.1 1884323..1885096(+) (codY) [Staphylococcus aureus strain IMT37083]
MSLLSKTRELNTLLQKHKGIAVDFKDVAQTISSVTVTNVFIVSRRGKILGSSLNELLKSQRIIQMLEERHIPSEYTERLM
EVKQTESNIDIDNVLTVFPPENRELFIDSRTTIFPILGGGERLGTLVLGRVHDDFNENDLVLGEYAATVIGMEILREKHS
EVEKEARDKAAITMAINSLSYSEKEAIEHIFEELGGTEGLLIASKVADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
FIKVKKEKFLDELEKSK

Nucleotide

• Length: 774 bp

>NTDB_id=967683 ACKZ7V_RS09415 WP_000055337.1 1884323..1885096(+) (codY) [Staphylococcus aureus strain IMT37083]
ATGAGCTTATTATCTAAAACGAGAGAGTTAAACACGTTACTTCAAAAACACAAAGGTATTGCGGTTGATTTTAAAGATGT
AGCACAAACGATTAGTAGCGTAACTGTAACAAATGTATTTATTGTATCGCGTCGAGGTAAAATTTTAGGGTCGAGTCTAA
ATGAATTATTAAAAAGTCAAAGAATTATTCAAATGTTGGAAGAAAGACATATTCCAAGTGAATATACAGAACGATTAATG
GAAGTTAAACAAACAGAATCAAATATTGATATCGACAATGTATTAACAGTTTTCCCACCTGAAAACAGAGAATTATTCAT
AGATAGTCGTACAACTATCTTCCCAATTTTAGGTGGAGGAGAAAGATTAGGTACATTAGTACTTGGTCGAGTACATGATG
ATTTTAATGAAAATGATTTGGTACTAGGTGAATATGCTGCTACAGTTATTGGTATGGAAATCTTACGTGAGAAGCATAGT
GAAGTAGAAAAAGAAGCGCGCGATAAAGCTGCTATTACAATGGCGATTAATTCATTATCTTATTCTGAAAAAGAAGCAAT
TGAACATATCTTTGAAGAACTTGGCGGTACGGAAGGCCTATTAATCGCATCAAAAGTTGCAGATAGAGTTGGTATTACTA
GATCTGTAATTGTAAATGCACTACGTAAATTAGAAAGTGCTGGTGTAATTGAATCACGTTCTCTAGGGATGAAAGGTACT
TTCATTAAAGTTAAAAAAGAAAAATTCTTAGATGAATTAGAAAAAAGTAAGTAA

Domains

Predicted by InterProScan.

• CodY GAF-like domain (CodY) (2-178)

• CodY helix-turn-helix domain (HTH_CodY) (198-255)

3D structure

• AlphaFold DB: P63843

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
codY	Bacillus subtilis subsp. subtilis str. 168	64.202	100	0.642
codY	Lactococcus lactis subsp. lactis strain DGCC12653	42.802	100	0.428