Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   MKY43_RS06220 Genome accession   NZ_CP150249
Coordinates   1234938..1235108 (+) Length   56 a.a.
NCBI ID   WP_031314537.1    Uniprot ID   -
Organism   Bacillus sp. FSL M8-0133     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1229938..1240108
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY43_RS06190 (MKY43_06190) - 1230806..1231618 (-) 813 WP_003180571.1 undecaprenyl-diphosphate phosphatase -
  MKY43_RS06195 (MKY43_06195) - 1231800..1231979 (+) 180 WP_003180573.1 YjzC family protein -
  MKY43_RS06200 (MKY43_06200) - 1232050..1232244 (-) 195 WP_009328851.1 YjzD family protein -
  MKY43_RS06205 (MKY43_06205) - 1232476..1233210 (+) 735 WP_009328850.1 hypothetical protein -
  MKY43_RS06210 (MKY43_06210) - 1233297..1233872 (+) 576 WP_016885912.1 hypothetical protein -
  MKY43_RS06215 (MKY43_06215) med 1233959..1234912 (+) 954 WP_009328848.1 BMP family ABC transporter substrate-binding protein Regulator
  MKY43_RS06220 (MKY43_06220) comZ 1234938..1235108 (+) 171 WP_031314537.1 ComZ family protein Regulator
  MKY43_RS06225 (MKY43_06225) - 1235160..1235399 (-) 240 WP_009328847.1 hypothetical protein -
  MKY43_RS06230 (MKY43_06230) - 1235569..1236507 (+) 939 WP_011197763.1 beta-ketoacyl-ACP synthase III -
  MKY43_RS06235 (MKY43_06235) fabF 1236529..1237767 (+) 1239 WP_009328845.1 beta-ketoacyl-ACP synthase II -
  MKY43_RS06240 (MKY43_06240) - 1237855..1238643 (+) 789 WP_009328844.1 DUF2268 domain-containing protein -
  MKY43_RS06245 (MKY43_06245) - 1238835..1239809 (+) 975 WP_009328843.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 56 a.a.        Molecular weight: 6274.27 Da        Isoelectric Point: 3.9646

>NTDB_id=967679 MKY43_RS06220 WP_031314537.1 1234938..1235108(+) (comZ) [Bacillus sp. FSL M8-0133]
MEFLQIAMKYVPEAKEEMEKAGIELSPEMLEPFMNLFTKVMAEAYELGKADAGSDA

Nucleotide


Download         Length: 171 bp        

>NTDB_id=967679 MKY43_RS06220 WP_031314537.1 1234938..1235108(+) (comZ) [Bacillus sp. FSL M8-0133]
ATGGAATTTTTGCAAATTGCCATGAAATACGTTCCGGAAGCGAAAGAAGAGATGGAGAAAGCGGGAATCGAACTTTCGCC
GGAAATGCTTGAGCCGTTCATGAACCTGTTTACAAAAGTGATGGCGGAAGCTTACGAGCTCGGTAAAGCGGACGCCGGTT
CTGACGCCTGA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(1-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

75

100

0.75

Multiple sequence alignment