Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrP   Type   Regulator
Locus tag   MKY54_RS15915 Genome accession   NZ_CP150245
Coordinates   3595846..3597597 (-) Length   583 a.a.
NCBI ID   WP_339187020.1    Uniprot ID   -
Organism   Paenibacillus sp. FSL P2-0121     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 3590846..3602597
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY54_RS15900 (MKY54_15900) - 3591395..3592330 (+) 936 WP_081383287.1 carbohydrate ABC transporter permease -
  MKY54_RS15905 (MKY54_15905) - 3592421..3593983 (+) 1563 WP_076130604.1 ABC transporter substrate-binding protein -
  MKY54_RS15910 (MKY54_15910) rcrQ 3594086..3595846 (-) 1761 WP_036677200.1 ABC transporter ATP-binding protein Regulator
  MKY54_RS15915 (MKY54_15915) rcrP 3595846..3597597 (-) 1752 WP_339187020.1 ABC transporter ATP-binding protein Regulator
  MKY54_RS15920 (MKY54_15920) - 3597717..3598772 (-) 1056 WP_081383288.1 HAMP domain-containing sensor histidine kinase -
  MKY54_RS15925 (MKY54_15925) - 3598769..3599443 (-) 675 WP_076278084.1 response regulator transcription factor -
  MKY54_RS15930 (MKY54_15930) - 3599769..3600734 (+) 966 WP_076307838.1 aldo/keto reductase -
  MKY54_RS15935 (MKY54_15935) - 3600771..3601622 (+) 852 WP_312149071.1 aldo/keto reductase -

Sequence


Protein


Download         Length: 583 a.a.        Molecular weight: 63942.41 Da        Isoelectric Point: 7.2158

>NTDB_id=967453 MKY54_RS15915 WP_339187020.1 3595846..3597597(-) (rcrP) [Paenibacillus sp. FSL P2-0121]
MVTILKYLKPKEWALIGISILFIVTQVWLDLELPGYMSEITRLVQIPGSEMSEIIAAGGWMLLCALGSLATSIIVAGIAA
KIAANFSSRLRSKLFDKVQSFSMEEINNFSTASLITRSTNDITQVQMLIVIGLQLLVKAPILAVWAMLKITGKSWQWSLA
TGVAIGVLILIVGIVIVLVLPKFQKLQQLTDNLNRVARENLTGLRVIRAYNAESYQEDKFSVANSELTRTNLFANNVLSM
MMPSISLIMSGLSLAIYWIGAILIQNANGTAKMGLFSDMIVFSSYAMQVVMAFMMLIMIFILMPRAHVSAKRINEVLDTK
PSLENGSLTSSKANRLGEVEFKNVSFKYPDAEEYVIEDISFTVKKGETVAFIGSTGCGKSTVVNLIPRFYDATAGEVLVD
GINVNQYEQTALRNKMGYVSQRAILFGGTVSSNVAFGDNGSDLSSDVVDAIYTSQASDFVEKMEGSYEAHVSQGGTNLSG
GQKQRLSIARAIARRPEILIFDDSFSALDYKTDRKLRSELKKKSSGTTILIVAQRIGTIKDADKIIVLEAGRMAGMGTHD
ELMQTCDVYQEIAYSQLSKEELA

Nucleotide


Download         Length: 1752 bp        

>NTDB_id=967453 MKY54_RS15915 WP_339187020.1 3595846..3597597(-) (rcrP) [Paenibacillus sp. FSL P2-0121]
ATGGTAACTATACTTAAGTACTTAAAACCGAAGGAATGGGCCCTAATCGGTATCAGCATCCTATTCATTGTCACACAGGT
ATGGCTGGATCTGGAATTGCCCGGTTATATGAGCGAGATTACTCGTCTTGTACAGATACCAGGGAGTGAAATGAGCGAAA
TCATTGCAGCCGGAGGCTGGATGTTGCTCTGTGCCCTCGGCAGCTTAGCCACATCAATTATAGTGGCAGGGATCGCCGCA
AAAATTGCCGCCAACTTCTCTTCAAGATTACGCTCCAAATTGTTTGATAAGGTACAGTCTTTCTCTATGGAAGAAATCAA
CAACTTCTCAACAGCTAGTTTAATTACCCGTTCAACAAATGACATTACACAAGTGCAAATGCTGATTGTCATCGGTCTGC
AACTGCTGGTGAAGGCTCCCATCCTTGCCGTTTGGGCAATGCTCAAAATTACAGGCAAGAGTTGGCAGTGGTCGCTTGCT
ACCGGTGTCGCCATTGGGGTATTGATTCTTATTGTCGGCATAGTGATCGTGCTAGTGCTTCCGAAATTCCAAAAATTGCA
GCAATTGACTGATAATCTTAATCGTGTTGCAAGAGAGAATCTTACCGGCCTTCGTGTCATTCGTGCGTATAATGCGGAAA
GCTACCAGGAAGATAAATTTAGCGTAGCCAACAGCGAGCTTACCCGAACGAATTTATTCGCCAATAATGTACTGTCCATG
ATGATGCCAAGTATTTCTCTGATTATGAGCGGTTTAAGTCTCGCAATATATTGGATTGGTGCTATTTTGATTCAAAATGC
CAATGGTACGGCGAAGATGGGCTTATTTTCAGATATGATTGTCTTCTCATCCTATGCGATGCAGGTGGTTATGGCATTCA
TGATGCTGATCATGATTTTTATCCTGATGCCTCGTGCCCATGTATCCGCTAAAAGAATCAATGAAGTGCTGGATACTAAG
CCAAGCTTAGAGAACGGATCACTTACTTCCTCCAAGGCAAATCGGTTGGGTGAGGTCGAATTCAAAAATGTCAGCTTTAA
ATATCCGGATGCAGAAGAATACGTTATTGAAGATATCAGCTTTACGGTGAAAAAAGGAGAAACTGTAGCCTTCATCGGTT
CAACCGGATGCGGAAAAAGTACCGTCGTGAACCTGATTCCTCGCTTTTATGATGCTACAGCAGGTGAAGTGTTGGTGGAT
GGTATTAATGTTAACCAATATGAGCAAACTGCACTGCGCAATAAAATGGGATATGTATCTCAGAGAGCGATTTTGTTTGG
CGGCACGGTGAGCTCAAATGTTGCTTTTGGCGATAATGGCAGTGATCTGTCCTCTGATGTTGTTGATGCCATTTACACCT
CTCAAGCTTCAGATTTTGTTGAAAAGATGGAAGGAAGCTACGAGGCTCATGTCTCTCAAGGCGGTACGAACTTGTCTGGC
GGTCAAAAACAACGTCTTTCCATTGCCCGAGCCATTGCCCGTCGTCCTGAAATATTAATCTTCGACGATTCCTTCTCAGC
GCTTGATTATAAGACGGATCGCAAATTGCGAAGTGAATTGAAGAAAAAATCCAGCGGTACAACGATACTAATCGTTGCTC
AACGGATCGGTACAATCAAAGATGCAGACAAAATCATTGTACTGGAAGCCGGACGAATGGCAGGCATGGGAACACATGAT
GAATTGATGCAGACCTGTGACGTCTACCAAGAGATTGCTTACTCACAACTTTCAAAGGAGGAGCTAGCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

52.181

100

0.533


Multiple sequence alignment