Detailed information NTG0967422

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ACJX3V_RS12815
• Genome accession: NZ_CP176523
• Coordinates: 2624621..2625889 (+)
• Length: 422 a.a.
• NCBI ID: WP_003152729.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain MEPW12
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2619621..2630889

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJX3V_RS12795	-	2620992..2621612 (-)	621	WP_088005508.1	tetratricopeptide repeat protein	-
ACJX3V_RS12800	mnmA	2621700..2622815 (-)	1116	WP_024085647.1	tRNA 2-thiouridine(34) synthase MnmA	-
ACJX3V_RS12805	-	2622852..2623991 (-)	1140	WP_046559919.1	cysteine desulfurase family protein	-
ACJX3V_RS12810	cymR	2624010..2624426 (-)	417	WP_003152730.1	cysteine metabolism transcriptional regulator CymR	-
ACJX3V_RS12815	rarA	2624621..2625889 (+)	1269	WP_003152729.1	replication-associated recombination protein A	Machinery gene
ACJX3V_RS12820	-	2625965..2626729 (-)	765	WP_044053490.1	ThiF family adenylyltransferase	-
ACJX3V_RS12830	aspS	2627056..2628834 (-)	1779	WP_003152727.1	aspartate--tRNA ligase	-
ACJX3V_RS12835	hisS	2628849..2630123 (-)	1275	WP_003152726.1	histidine--tRNA ligase	-
ACJX3V_RS12840	-	2630480..2630650 (-)	171	WP_087920774.1	YrzK family protein	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46660.57 Da
• Isoelectric Point: 8.5446

>NTDB_id=967422 ACJX3V_RS12815 WP_003152729.1 2624621..2625889(+) (rarA) [Bacillus amyloliquefaciens strain MEPW12]
MKPLAYRMRPANIEDIIGQEHLVKEDKIIGRMVRAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVIHNKKDME
IVVQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALKR
ALTDEHRGLGSYSVSVDDDAMDHFAQGCGGDVRSALNALELAVLSTKESSDGTIRITRETAEECLQKKSYTHDKNGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESISRRLLVIAYEDIGLASPQAGPRVLSAIQTAERIGFPEARIPLANAV
IELCLSPKSNSAISAVDEALKDIRTGKIGDVPKHLKDAHYKGAQELGRGIGYQYPHDFENGWVEQQYLPDPLKNKQYYKP
KQTGKFEAAIKQVYEKLMKQKK

Nucleotide

• Length: 1269 bp

>NTDB_id=967422 ACJX3V_RS12815 WP_003152729.1 2624621..2625889(+) (rarA) [Bacillus amyloliquefaciens strain MEPW12]
ATGAAACCATTGGCGTATCGGATGCGGCCTGCCAATATCGAAGACATTATCGGTCAGGAACATTTGGTCAAAGAAGATAA
AATCATCGGCAGAATGGTGCGTGCGAAGCACTTATCATCCATGATCCTGTACGGACCGCCGGGCATCGGAAAAACGTCCA
TCGCCACAGCGATCGCAGGATCGACAAGCATCGCATTCAGGAAATTGAATGCCGTCATTCATAATAAAAAAGACATGGAG
ATTGTCGTACAGGAAGCGAAAATGTCAGGCCAGGTCATTTTAATCCTTGATGAAGTGCACAGACTTGATAAGGGAAAGCA
GGATTTTCTGCTGCCCTATTTAGAAAACGGCATGATTATTTTAATCGGCGCGACGACCGCCAATCCTTATCATGCCATTA
ACCCGGCCATCAGAAGCCGGACCCAGATATTTGAGCTTGAACCGTTAACACCCGATCTGATCAAGCAGGCATTGAAAAGA
GCGCTCACAGATGAACACCGGGGACTCGGTTCCTACAGCGTTTCGGTGGACGACGACGCGATGGATCATTTCGCACAAGG
GTGCGGAGGAGACGTCCGCTCCGCTTTGAACGCACTGGAGCTTGCCGTGCTCTCCACAAAGGAATCAAGCGACGGCACGA
TCCGGATTACACGGGAAACAGCGGAAGAATGTCTGCAGAAAAAAAGCTATACCCATGATAAAAACGGCGATGCGCATTAT
GACGTCTTATCCGCGTTCCAAAAATCGATCCGGGGCTCGGACGCAAACGCCGCCCTTCATTATCTGGCCCGTCTGATCGA
AGCCGGAGACCTTGAAAGCATATCAAGAAGGCTTCTCGTGATCGCCTATGAAGATATCGGCCTCGCAAGCCCGCAGGCAG
GCCCCCGGGTGCTGAGCGCGATTCAGACCGCAGAACGGATCGGCTTTCCGGAAGCGAGAATTCCGCTGGCCAATGCGGTA
ATCGAATTATGCCTCTCGCCGAAATCAAACTCCGCCATTTCAGCCGTTGATGAGGCGCTCAAAGACATCAGGACGGGTAA
AATCGGCGATGTGCCGAAACATTTAAAAGACGCCCACTATAAAGGGGCCCAAGAGCTCGGACGCGGGATCGGCTATCAAT
ATCCCCACGATTTCGAGAACGGATGGGTCGAACAGCAATATTTGCCCGATCCGTTAAAAAACAAGCAATACTATAAACCG
AAACAAACGGGGAAATTTGAAGCCGCCATAAAGCAAGTGTATGAAAAACTGATGAAGCAGAAAAAATAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• AAA C-terminal domain (AAA_assoc_2) (172-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	90.974	99.763	0.908