Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   MKY24_RS12675 Genome accession   NZ_CP150243
Coordinates   2905088..2906938 (+) Length   616 a.a.
NCBI ID   WP_339202167.1    Uniprot ID   -
Organism   Paenibacillus sp. FSL P2-0322     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2900088..2911938
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY24_RS12655 (MKY24_12655) - 2900826..2902049 (+) 1224 WP_339202164.1 Ger(x)C family spore germination protein -
  MKY24_RS12660 (MKY24_12660) - 2902058..2902285 (+) 228 WP_226887813.1 hypothetical protein -
  MKY24_RS12665 (MKY24_12665) - 2902848..2903258 (+) 411 WP_028541283.1 MarR family transcriptional regulator -
  MKY24_RS12670 (MKY24_12670) rcrP 2903332..2905095 (+) 1764 WP_023988614.1 ABC transporter ATP-binding protein Regulator
  MKY24_RS12675 (MKY24_12675) rcrQ 2905088..2906938 (+) 1851 WP_339202167.1 ABC transporter ATP-binding protein Regulator
  MKY24_RS12680 (MKY24_12680) - 2907059..2907367 (+) 309 WP_025723019.1 hypothetical protein -
  MKY24_RS12685 (MKY24_12685) - 2907712..2908065 (+) 354 WP_053325447.1 hypothetical protein -
  MKY24_RS12690 (MKY24_12690) - 2908311..2908730 (+) 420 WP_028541280.1 ester cyclase -
  MKY24_RS12695 (MKY24_12695) - 2908955..2910346 (-) 1392 WP_071558738.1 PLP-dependent aminotransferase family protein -
  MKY24_RS12700 (MKY24_12700) azlC 2910454..2911185 (+) 732 WP_339202169.1 azaleucine resistance protein AzlC -
  MKY24_RS12705 (MKY24_12705) - 2911166..2911498 (+) 333 WP_339202171.1 branched-chain amino acid transporter permease -

Sequence

Protein


Download         Length: 616 a.a.        Molecular weight: 67916.55 Da        Isoelectric Point: 6.1584

>NTDB_id=967386 MKY24_RS12675 WP_339202167.1 2905088..2906938(+) (rcrQ) [Paenibacillus sp. FSL P2-0322]
MDKNEHTVDSQQMKMNQGGPMGKGPAGGKGAGEKANNFKKTIRQLISYIKAYVPMIILAMVLALVGSTLNVIGPDKLSDI
ANLIQEGIVTGIDVSAVQKIVLVLALLYGFGLIFNYFQGFITATVSQRLTKKMRTELSQKIDHMPLKYFDSTSYGNVLSR
VTNDVDTIGQTLNNSLGTLVGALATFVGALIMMLYTNWIMTVTGIVATLIGFCLMSVIMKHSQKYFVAQQAELGQINGHI
EETYAGHNVVKVYNGEQAAKEVFHGINSRLYTNAWKSQFMSGLMMPVMMFIGNFGYVAVCVVGALLVYQQTITIGTIVAF
MVYIRLFTQPLSQLAQAATNLQSAAAASERVFEFLGEEELADERHKTIKLDTAKGDVEFKHVRFGYNTDRMIIKDFSMKA
EAGQKIAIVGPTGAGKTTLVNLLMRFYELNDGEIYIDGTPISQLTRENIHELFCMVLQDTWLFEGTIRDNIVFSKDHVTD
EQVEAASRAVGLHSFIKTLPQGYDTVLDDKANLSAGQKQLITIARAMIEDSPMLILDEATSSVDTRTELLIQQAMDQLTV
GKTSFVIAHRLSTIKNADLILVMKDGDIIEMGNHEELLAKGGFYADLYNSQFEHAS

Nucleotide


Download         Length: 1851 bp        

>NTDB_id=967386 MKY24_RS12675 WP_339202167.1 2905088..2906938(+) (rcrQ) [Paenibacillus sp. FSL P2-0322]
ATGGATAAGAATGAACACACCGTCGACAGCCAGCAAATGAAAATGAATCAGGGAGGTCCCATGGGTAAAGGCCCTGCGGG
GGGCAAGGGTGCTGGTGAAAAAGCGAATAATTTTAAAAAGACCATCAGACAGCTTATATCCTACATCAAGGCCTATGTGC
CTATGATTATACTAGCTATGGTACTGGCCTTGGTCGGCTCCACCCTCAACGTGATTGGCCCGGATAAGCTCAGTGATATT
GCCAACCTGATTCAGGAAGGAATCGTAACCGGGATTGATGTAAGTGCTGTTCAGAAGATTGTTCTTGTATTGGCGCTTTT
ATATGGATTTGGTCTTATCTTTAACTATTTCCAGGGCTTCATTACGGCAACCGTCTCACAGCGTCTTACAAAGAAGATGC
GGACAGAGCTGTCTCAAAAAATCGATCATATGCCTTTGAAGTATTTTGACTCTACGAGTTACGGTAATGTGCTTAGCCGC
GTAACCAACGATGTCGATACCATCGGACAAACGTTAAACAACAGTCTCGGCACGCTTGTCGGTGCACTGGCTACCTTTGT
GGGCGCCTTGATTATGATGCTTTATACAAACTGGATCATGACCGTTACCGGAATTGTAGCTACGCTGATCGGCTTTTGCC
TGATGAGCGTGATTATGAAGCATTCACAGAAATACTTTGTAGCACAGCAAGCGGAGCTTGGCCAGATCAACGGTCATATC
GAAGAAACCTATGCTGGTCATAACGTAGTCAAGGTATATAACGGGGAACAAGCAGCCAAGGAAGTGTTTCATGGCATTAA
CAGCCGCCTATATACAAATGCATGGAAGTCCCAGTTCATGTCTGGTCTGATGATGCCAGTCATGATGTTCATTGGAAATT
TTGGTTATGTCGCGGTTTGTGTCGTGGGAGCTTTGCTGGTCTACCAACAGACTATAACTATCGGAACTATTGTCGCCTTC
ATGGTGTATATTCGTCTGTTTACACAGCCCTTGTCGCAGCTGGCACAGGCCGCAACCAATCTGCAGTCGGCGGCTGCCGC
CAGTGAACGTGTATTCGAATTTCTGGGTGAAGAAGAATTGGCAGATGAGCGTCACAAGACCATAAAGCTGGACACCGCCA
AAGGGGATGTCGAATTCAAACATGTCCGTTTCGGCTATAATACAGACCGTATGATTATCAAGGACTTCTCCATGAAAGCT
GAAGCTGGTCAGAAAATTGCCATTGTCGGTCCGACAGGCGCCGGTAAGACCACGCTCGTGAATTTGCTCATGCGGTTTTA
TGAGCTGAACGATGGAGAAATCTACATTGACGGAACCCCGATTAGTCAATTAACGCGTGAGAATATTCATGAATTATTCT
GTATGGTGCTTCAGGATACCTGGCTGTTCGAAGGAACGATTCGTGACAATATCGTCTTTTCCAAAGATCATGTTACCGAT
GAGCAGGTGGAAGCTGCTAGTAGAGCGGTGGGGCTGCACAGCTTCATTAAAACACTGCCGCAGGGCTATGATACAGTGCT
GGACGACAAAGCCAATCTCTCCGCCGGTCAAAAGCAATTGATTACCATTGCAAGAGCGATGATTGAAGATTCACCCATGC
TCATTCTGGATGAGGCCACAAGCTCGGTTGATACGCGTACGGAATTGCTGATTCAACAAGCGATGGACCAGCTGACTGTG
GGGAAAACCTCCTTTGTGATTGCTCACCGACTTTCGACGATCAAGAATGCGGATCTGATTCTGGTCATGAAGGATGGTGA
CATTATCGAAATGGGTAACCATGAGGAATTGCTGGCTAAAGGCGGCTTCTATGCTGATCTATACAACAGTCAGTTTGAAC
ATGCATCCTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(57-331)

ABC transporter (ABC_tran)

(394-541)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

56.326

93.669

0.528

Multiple sequence alignment