Detailed information NTG0967313

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ACKTSN_RS37990
• Genome accession: NZ_CP176503
• Coordinates: 8050282..8051637 (+)
• Length: 451 a.a.
• NCBI ID: WP_409473226.1
• Uniprot ID: -
• Organism: Streptomyces sp. HC307
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 8045282..8056637

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACKTSN_RS37970 (ACKTSN_37970)	-	8046421..8047239 (-)	819	WP_409473222.1	peptidylprolyl isomerase	-
ACKTSN_RS37975 (ACKTSN_37975)	-	8047420..8048127 (+)	708	WP_409473223.1	MBL fold metallo-hydrolase	-
ACKTSN_RS37980 (ACKTSN_37980)	hisS	8048141..8049403 (+)	1263	WP_409473224.1	histidine--tRNA ligase	-
ACKTSN_RS37985 (ACKTSN_37985)	-	8049578..8050234 (+)	657	WP_409473225.1	vitamin K epoxide reductase family protein	-
ACKTSN_RS37990 (ACKTSN_37990)	rarA	8050282..8051637 (+)	1356	WP_409473226.1	replication-associated recombination protein A	Machinery gene
ACKTSN_RS37995 (ACKTSN_37995)	rpsD	8051981..8052595 (+)	615	WP_129796831.1	30S ribosomal protein S4	-
ACKTSN_RS38000 (ACKTSN_38000)	-	8052787..8053221 (+)	435	WP_165396151.1	DUF948 domain-containing protein	-
ACKTSN_RS38005 (ACKTSN_38005)	-	8053231..8053581 (+)	351	WP_385261445.1	hypothetical protein	-
ACKTSN_RS38010 (ACKTSN_38010)	alaS	8053581..8056253 (+)	2673	WP_409473227.1	alanine--tRNA ligase	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 48169.69 Da
• Isoelectric Point: 6.6272

>NTDB_id=967313 ACKTSN_RS37990 WP_409473226.1 8050282..8051637(+) (rarA) [Streptomyces sp. HC307]
MEPDLFTAAAEERQEKDPTASPLAVRMRPRTLDEVVGQQHLLKPGSPLRRLVGEGAGGPAGPASVILWGPPGTGKTTLAY
VVSKATNKRFVELSAITAGVKEVRAVIDGARRATGGFGKETVLFLDEIHRFSKAQQDSLLPAVENRWVTLIAATTENPYF
SVISPLLSRSLLLTLEPLTDDDIRGLIHRALTDDRGLGGAVTLPEDTEAHLLRIAGGDARRALTALEAAAGAALDKGETE
IGLRTLEETVDRAAVKYDRDGDQHYDVASALIKSIRGSDVDAALHYLARMIEAGEDPRFIARRLMISASEDIGLADPHAL
PIAVAAAQAVAMIGFPEAALTLSHATIALALAPKSNAATTAIGAALDDVRKGLAGPVPPHLRDGHYKGAAKLGHAQGYVY
PHDLPEGIAGQQYAPDALKDREYYTPTRHGAEARYADAVEWTRKHLGRRRP

Nucleotide

• Length: 1356 bp

>NTDB_id=967313 ACKTSN_RS37990 WP_409473226.1 8050282..8051637(+) (rarA) [Streptomyces sp. HC307]
GTGGAACCCGACCTGTTCACCGCCGCCGCAGAAGAACGCCAGGAGAAGGACCCGACCGCAAGTCCCCTGGCGGTGCGGAT
GCGCCCGCGCACCCTCGACGAGGTCGTGGGCCAGCAGCACCTGCTGAAGCCCGGCTCGCCCCTGCGCCGACTGGTCGGCG
AGGGCGCCGGGGGACCGGCGGGTCCGGCCTCGGTGATCCTGTGGGGCCCGCCCGGCACCGGCAAGACGACCCTCGCCTAT
GTCGTCTCCAAGGCCACCAACAAGCGCTTCGTGGAGCTGTCCGCGATCACCGCCGGCGTCAAGGAGGTCCGCGCGGTCAT
CGACGGCGCCCGCCGCGCCACCGGCGGCTTCGGCAAGGAGACCGTCCTCTTCCTCGACGAGATCCACCGCTTCAGCAAGG
CCCAGCAGGACTCCCTCCTCCCGGCCGTCGAGAACCGCTGGGTCACGCTGATCGCCGCCACCACGGAGAACCCGTACTTC
TCGGTGATCTCGCCCCTCCTCTCCCGCTCCCTGCTGCTGACTCTCGAGCCCCTCACGGACGACGACATACGCGGTCTGAT
CCACCGGGCCCTCACCGACGACCGCGGCCTGGGCGGCGCCGTCACCCTTCCCGAGGACACCGAGGCCCACCTGCTGCGGA
TCGCCGGCGGCGACGCCCGCCGCGCCCTGACCGCCCTGGAGGCCGCCGCCGGGGCGGCGCTCGACAAGGGCGAGACGGAG
ATCGGGCTCCGGACGCTGGAGGAGACCGTCGACCGCGCCGCCGTGAAGTACGACCGCGACGGCGACCAGCACTACGACGT
GGCCAGCGCCCTGATCAAGTCGATCCGCGGCTCCGACGTCGACGCGGCCCTGCACTACCTGGCCCGCATGATCGAGGCCG
GCGAGGACCCCCGCTTCATCGCCCGCCGCCTGATGATCTCCGCCAGCGAGGACATCGGCCTCGCCGACCCCCACGCCCTG
CCCATCGCGGTCGCCGCCGCCCAGGCCGTCGCCATGATCGGCTTCCCCGAGGCCGCCCTCACCCTCAGCCACGCCACCAT
CGCCCTCGCCCTGGCTCCCAAGTCCAACGCCGCGACGACCGCGATCGGCGCCGCCCTGGACGACGTACGCAAGGGACTGG
CCGGCCCCGTCCCGCCGCACCTGCGCGACGGGCACTACAAGGGCGCCGCCAAGCTGGGCCACGCCCAGGGGTACGTGTAT
CCGCACGACCTGCCCGAGGGCATCGCCGGCCAGCAGTACGCCCCGGACGCCCTCAAGGACCGGGAGTACTACACACCGAC
CCGGCACGGCGCCGAGGCACGCTACGCGGACGCCGTGGAGTGGACCAGGAAGCACCTCGGTCGCAGGCGGCCCTGA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (277-441)

• ATPase family associated with various cellular activities (AAA) (AAA) (65-169)

• AAA C-terminal domain (AAA_assoc_2) (200-276)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	43.88	96.009	0.421