Detailed information    

insolico Bioinformatically predicted

Overview


Name   recD2   Type   Machinery gene
Locus tag   MKY51_RS11395 Genome accession   NZ_CP150231
Coordinates   2257600..2260095 (-) Length   831 a.a.
NCBI ID   WP_339172136.1    Uniprot ID   -
Organism   Solibacillus sp. FSL R5-0691     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2252600..2265095
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY51_RS11380 (MKY51_11380) - 2254093..2255241 (-) 1149 WP_339172131.1 MFS transporter -
  MKY51_RS11385 (MKY51_11385) yeiL 2255345..2256013 (+) 669 WP_339172132.1 transcriptional regulator YeiL -
  MKY51_RS11390 (MKY51_11390) - 2256056..2257267 (-) 1212 WP_339172134.1 NupC/NupG family nucleoside CNT transporter -
  MKY51_RS11395 (MKY51_11395) recD2 2257600..2260095 (-) 2496 WP_339172136.1 ATP-dependent RecD-like DNA helicase Machinery gene
  MKY51_RS11400 (MKY51_11400) hisA 2260256..2261017 (+) 762 WP_339172138.1 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase -
  MKY51_RS11405 (MKY51_11405) - 2261135..2262028 (-) 894 WP_339172141.1 manganese catalase family protein -
  MKY51_RS11410 (MKY51_11410) - 2262094..2262300 (-) 207 WP_251689991.1 YuzF family protein -
  MKY51_RS11415 (MKY51_11415) dtd 2262371..2262817 (-) 447 WP_339172143.1 D-aminoacyl-tRNA deacylase -
  MKY51_RS11420 (MKY51_11420) - 2262836..2265031 (-) 2196 WP_339172145.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase -

Sequence


Protein


Download         Length: 831 a.a.        Molecular weight: 92641.23 Da        Isoelectric Point: 4.9653

>NTDB_id=967097 MKY51_RS11395 WP_339172136.1 2257600..2260095(-) (recD2) [Solibacillus sp. FSL R5-0691]
MAENLNLFDINKLFILGRPIVTIFHNATNMYSIVRVKIQETNIQHDEKEIIIVGYFPQLVTDELYRFTGQLKSHPKYGMQ
FQIDTFEKEVPTTEQGIVHYLSSDLFTGVGRKTAETIVEKLGMDALTKILEDPSALDAVPRLSAEKKLHIRQTIEENLGL
ERVMVRLNDWGFGPQLGMKIYQAYREETIPLLTENPYRLIEEVEGVGFIRADELGSKLGITGNHPDRIKAAIFHVLTNAA
LSEGHVYLDAEMVLPMVKDILEQSQRIEIPYEAISKAAIEMREDSKICGEETRMYLPSLYFSEVGIASKINELKEKNKMA
ESFSKDEIRKAIGDIEEQYDVTYAPTQAQAIETAINSAVMILTGGPGTGKTTVVRGLVEVYAELHGLSLNPKTYAEKEEP
FPIVLAAPTGRAAKRLAESTGLPAMTIHRLLGFNGQEKDEETEREVVGRLIIIDEMSMVDTWLAHQLLKALHEDVQVVFV
GDQDQLPPVGPGQVLKDLLASKQIPTVELTDIYRQAEGSTIIEMAHQIKKGKVPDTLTAKTTDRSFIQAGAGQVTSVVTQ
IVKGALAKGQAIRDIQVLAPMYKGPAGIDNLNKEIQQLVNPNDGSRKELVFGDTIYRIGDKVLQLVNQPDNNVFNGDMGE
VISIIRAKETVEKQDLLIVSYDGIEVTYQRADLNQITLAYCCSIHKSQGSEFQTVIMPIVRGYSKMLRRNLLYTGITRAK
NFLILCGEPDVLANGLAKTDDLTRLTTLKARLNPEFITAEKMKELPETEEKQVAVKEEKQNPSTEQLGLLNVSDSHKIGE
SLPNHLTAETAPYIHPLIGMANISPYDFNEE

Nucleotide


Download         Length: 2496 bp        

>NTDB_id=967097 MKY51_RS11395 WP_339172136.1 2257600..2260095(-) (recD2) [Solibacillus sp. FSL R5-0691]
ATGGCGGAAAATCTAAACTTGTTTGACATAAATAAGCTCTTTATTTTAGGTCGACCAATTGTAACAATTTTTCATAATGC
AACGAATATGTACTCCATTGTTCGTGTCAAAATTCAAGAAACCAATATACAGCATGACGAAAAAGAAATTATCATCGTTG
GTTATTTTCCTCAATTAGTAACTGATGAACTATACCGTTTTACAGGGCAGCTAAAAAGTCATCCGAAATACGGGATGCAG
TTTCAAATTGATACATTTGAAAAAGAAGTGCCGACAACAGAGCAGGGAATTGTCCATTATTTATCAAGTGACCTATTTAC
AGGGGTCGGGAGAAAAACAGCAGAGACAATCGTAGAAAAGCTCGGAATGGATGCCCTCACGAAAATATTGGAGGATCCGT
CAGCACTTGATGCAGTTCCCCGACTATCTGCTGAAAAGAAATTACATATTCGCCAAACAATCGAAGAAAATCTTGGTTTG
GAACGGGTGATGGTACGCCTGAATGACTGGGGCTTTGGACCACAGCTCGGGATGAAAATTTATCAGGCTTACCGGGAAGA
AACCATTCCGCTGCTGACAGAAAATCCTTATCGTTTAATTGAGGAAGTCGAAGGGGTCGGATTTATACGTGCGGATGAAC
TCGGTTCGAAGCTGGGGATCACGGGAAATCACCCGGACCGAATTAAAGCAGCCATTTTTCATGTGCTGACAAATGCAGCA
TTATCTGAAGGCCATGTTTATTTGGATGCGGAAATGGTGCTTCCGATGGTGAAAGATATACTTGAACAAAGTCAGCGCAT
TGAAATTCCGTATGAAGCGATTTCGAAAGCGGCAATCGAAATGCGAGAGGATTCGAAAATATGCGGTGAAGAAACACGCA
TGTACTTGCCTTCACTTTATTTTAGTGAAGTGGGCATTGCCAGTAAGATTAATGAACTGAAAGAAAAAAATAAAATGGCT
GAAAGTTTTTCGAAAGATGAAATCCGAAAAGCGATTGGCGATATTGAAGAGCAGTATGATGTGACCTATGCGCCGACACA
GGCACAGGCGATTGAAACGGCGATTAATTCCGCGGTAATGATTTTAACAGGCGGACCGGGAACTGGGAAAACAACGGTTG
TCCGGGGTTTGGTCGAAGTATATGCTGAGCTTCACGGATTATCACTGAACCCGAAAACGTACGCGGAAAAAGAAGAACCG
TTTCCGATTGTACTAGCTGCACCTACAGGACGTGCAGCGAAAAGGCTTGCGGAATCTACGGGATTGCCTGCAATGACCAT
ACACCGCTTATTAGGATTTAATGGGCAGGAAAAGGATGAAGAAACGGAGCGTGAAGTTGTAGGGCGGCTCATCATTATCG
ATGAGATGTCAATGGTGGATACATGGCTCGCACATCAGCTTTTAAAAGCGCTGCATGAAGATGTACAAGTCGTTTTTGTA
GGTGACCAGGATCAGTTACCGCCTGTCGGACCGGGGCAAGTATTAAAGGATTTGCTTGCATCGAAGCAAATTCCAACCGT
TGAATTGACGGATATTTATCGTCAGGCTGAAGGGTCTACAATTATCGAAATGGCCCACCAAATTAAAAAAGGCAAAGTTC
CGGATACGCTGACTGCCAAAACAACGGACCGTTCGTTTATCCAGGCAGGAGCCGGACAAGTGACAAGCGTTGTCACACAA
ATCGTAAAAGGGGCACTTGCAAAAGGACAGGCGATACGGGATATTCAAGTATTGGCGCCGATGTACAAAGGTCCTGCAGG
CATCGACAATTTAAATAAAGAAATTCAGCAGCTTGTAAATCCGAATGACGGGTCGAGAAAAGAACTTGTTTTCGGTGATA
CGATTTACCGAATCGGGGACAAAGTGCTGCAGCTGGTAAATCAGCCGGATAATAATGTATTCAACGGAGATATGGGCGAA
GTGATTTCCATCATCCGTGCAAAGGAAACAGTGGAAAAGCAGGATCTGCTTATTGTCAGCTACGATGGGATTGAAGTAAC
ATACCAGCGTGCAGACTTAAACCAGATAACTTTGGCCTATTGCTGTTCAATTCATAAATCACAAGGTTCGGAATTTCAAA
CGGTCATTATGCCGATTGTTCGTGGCTATTCAAAAATGCTTCGCAGAAATTTACTGTATACAGGGATTACACGTGCTAAA
AACTTTTTGATTTTATGTGGAGAGCCGGATGTATTAGCGAACGGATTAGCGAAAACAGATGATCTAACTCGATTGACAAC
CTTAAAGGCACGATTAAATCCGGAATTTATCACTGCAGAAAAGATGAAAGAATTACCGGAAACAGAAGAAAAACAAGTGG
CTGTTAAGGAAGAGAAACAAAATCCTTCCACAGAACAGCTTGGTCTGTTGAATGTCTCGGATTCGCATAAGATCGGTGAA
TCACTGCCAAATCACTTAACAGCTGAAACAGCACCATATATTCATCCATTAATTGGTATGGCAAATATTTCGCCATACGA
CTTCAATGAAGAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recD2 Bacillus subtilis subsp. subtilis str. 168

50.914

98.797

0.503


Multiple sequence alignment