Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   MKY19_RS25950 Genome accession   NZ_CP150228
Coordinates   5893941..5895698 (+) Length   585 a.a.
NCBI ID   WP_339798574.1    Uniprot ID   -
Organism   Paenibacillus sp. FSL R5-0744     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 5888941..5900698
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY19_RS25925 (MKY19_25925) ascB 5888955..5890367 (-) 1413 WP_339798568.1 6-phospho-beta-glucosidase -
  MKY19_RS25930 (MKY19_25930) - 5890481..5891449 (+) 969 WP_339804511.1 LacI family DNA-binding transcriptional regulator -
  MKY19_RS25935 (MKY19_25935) - 5891544..5892215 (+) 672 WP_076285307.1 response regulator transcription factor -
  MKY19_RS25940 (MKY19_25940) - 5892212..5893291 (+) 1080 WP_339798570.1 HAMP domain-containing sensor histidine kinase -
  MKY19_RS25945 (MKY19_25945) - 5893288..5893773 (+) 486 WP_339798572.1 GNAT family N-acetyltransferase -
  MKY19_RS25950 (MKY19_25950) rcrP 5893941..5895698 (+) 1758 WP_339798574.1 ABC transporter ATP-binding protein Regulator
  MKY19_RS25955 (MKY19_25955) rcrQ 5895698..5897458 (+) 1761 WP_339267149.1 ABC transporter ATP-binding protein Regulator
  MKY19_RS25960 (MKY19_25960) - 5897531..5898319 (-) 789 WP_339267151.1 RNA methyltransferase -
  MKY19_RS25965 (MKY19_25965) - 5898580..5899239 (-) 660 WP_076285312.1 TrkA family potassium uptake protein -
  MKY19_RS25970 (MKY19_25970) - 5899376..5899612 (+) 237 WP_339798576.1 small acid-soluble spore protein SspI -

Sequence

Protein


Download         Length: 585 a.a.        Molecular weight: 64455.89 Da        Isoelectric Point: 5.0775

>NTDB_id=967023 MKY19_RS25950 WP_339798574.1 5893941..5895698(+) (rcrP) [Paenibacillus sp. FSL R5-0744]
MLKLLKNLEPKEWFLFGISLMFIIAQVWLDLELPDYMSDITRLIQTPGSEMNEILVAGGWMLLCALGSLATSVVVAGIAA
RIAADLSARLRSKLFDKVQSFSMEEISNFSTASLITRSTNDITQVQMLIVIGLQLLVKAPILAVWAILKISGKSWEWTLT
TGAAVALLVVIVAVCIVLVLPKFKKLQLLTDNLNRVSRENLNGLRVIRAYNAEEYQEQKFAVANNELTSTNLFANNVMTL
LMPSITLIMSGLSLSIYWVGAVLIQAAEGTAKMGLFSDMIVFSSYAMQVVMAFMMLIMIFILLPRAQVSAKRINEVLETV
PSLKNGSVTQFPVKREDEIEFKGVSFKYPDAEEYVLENISFTAKQGETVAFIGSTGCGKSTLVNLIPRFYDATEGEVLVN
GINVREYDQQALRNKMGYVSQKAVLFGGTVSSNIAFGENGSGQVLSSDIVDAVYTSQSSEFVEKLEGNYDAHIAQGGTNL
SGGQKQRLSIARAIARRPEILIFDDSFSALDYKTDRKLRSELKKDAHDSTMLIVAQRIGTIKDADKIIVLEAGRIAGMGT
HDELMQSCDVYQEIAYSQLTKEELA

Nucleotide


Download         Length: 1758 bp        

>NTDB_id=967023 MKY19_RS25950 WP_339798574.1 5893941..5895698(+) (rcrP) [Paenibacillus sp. FSL R5-0744]
ATGTTGAAATTACTCAAGAATCTGGAACCCAAAGAATGGTTCTTATTCGGTATCAGTCTCATGTTCATTATCGCTCAAGT
CTGGCTGGATTTAGAACTGCCTGACTACATGAGTGATATTACCCGGCTGATCCAGACACCAGGGAGCGAAATGAATGAAA
TCCTTGTCGCAGGCGGTTGGATGCTGCTCTGTGCTCTTGGCAGTCTGGCGACCTCGGTTGTTGTAGCGGGCATTGCTGCA
AGAATAGCAGCCGATTTGTCTGCAAGATTGCGTTCCAAATTGTTCGATAAGGTACAATCCTTTTCGATGGAGGAGATCAG
TAACTTCTCAACAGCCAGTCTAATTACCCGTTCCACGAATGACATCACGCAAGTACAAATGCTGATTGTGATCGGCTTAC
AGCTACTTGTGAAAGCACCCATCCTCGCAGTGTGGGCGATACTCAAGATTTCGGGCAAAAGCTGGGAATGGACTCTTACG
ACAGGTGCCGCGGTCGCATTGCTAGTAGTTATTGTCGCAGTCTGTATCGTGCTCGTCCTGCCTAAATTTAAAAAGCTGCA
GCTGCTTACAGATAATCTGAATCGTGTATCCAGAGAGAATCTTAACGGTCTTCGTGTCATCCGGGCTTATAATGCCGAGG
AATATCAAGAACAGAAGTTCGCTGTAGCTAACAACGAGCTTACCAGTACCAACCTATTTGCCAACAATGTAATGACCCTA
TTGATGCCGAGTATTACTTTGATTATGAGTGGACTCAGTCTCTCCATCTATTGGGTGGGTGCAGTGCTCATTCAAGCAGC
CGAGGGCACTGCCAAGATGGGCTTGTTCTCAGATATGATCGTATTCTCATCTTATGCCATGCAAGTGGTTATGGCCTTTA
TGATGCTGATTATGATCTTTATTCTACTGCCCCGTGCTCAAGTATCGGCTAAACGTATCAATGAAGTGCTAGAAACAGTA
CCTAGCTTGAAGAATGGATCAGTAACTCAATTCCCTGTGAAGCGAGAAGATGAGATTGAATTCAAGGGGGTTAGCTTCAA
ATATCCAGATGCAGAGGAATATGTATTGGAGAACATCAGCTTCACGGCGAAGCAGGGGGAGACGGTTGCTTTTATCGGAT
CTACAGGCTGCGGGAAAAGTACACTTGTTAACCTCATTCCCCGTTTCTATGATGCTACAGAAGGCGAAGTGCTGGTAAAT
GGTATCAATGTCAGAGAATACGACCAGCAAGCGCTGCGGAATAAAATGGGCTATGTCTCTCAGAAGGCTGTTCTATTTGG
CGGAACAGTGTCCTCCAATATTGCATTTGGTGAGAACGGATCCGGTCAGGTCCTCAGTTCAGATATTGTAGATGCGGTGT
ACACTTCCCAATCCTCTGAATTTGTAGAAAAGCTAGAGGGGAACTATGATGCCCATATCGCCCAAGGCGGAACGAATCTG
TCTGGCGGGCAAAAACAGCGGCTGTCGATTGCCAGAGCGATTGCCCGGCGTCCAGAAATATTAATCTTTGACGATTCTTT
CTCCGCGCTTGACTATAAGACTGACCGCAAACTGCGCAGTGAGCTTAAGAAAGACGCGCATGATTCAACGATGCTGATCG
TTGCACAGCGTATTGGTACGATTAAAGATGCCGACAAGATCATTGTGCTGGAAGCCGGACGAATCGCAGGCATGGGAACC
CATGACGAACTAATGCAGTCCTGCGACGTCTATCAGGAAATTGCTTATTCTCAGCTTACAAAGGAGGAGCTTGCATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(18-293)

ABC transporter (ABC_tran)

(356-506)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

52.349

100

0.533

Multiple sequence alignment