Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   ACKWPP_RS06375 Genome accession   NZ_CP176418
Coordinates   1222935..1224671 (-) Length   578 a.a.
NCBI ID   WP_014637988.1    Uniprot ID   -
Organism   Streptococcus suis strain KKAHC02     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1217935..1229671
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKWPP_RS06360 (ACKWPP_06360) - 1218786..1220072 (-) 1287 WP_002940676.1 homoserine dehydrogenase -
  ACKWPP_RS06365 (ACKWPP_06365) - 1220177..1221100 (+) 924 WP_044679604.1 polysaccharide deacetylase family protein -
  ACKWPP_RS06370 (ACKWPP_06370) rcrQ 1221157..1222926 (-) 1770 WP_044679607.1 ABC transporter ATP-binding protein Regulator
  ACKWPP_RS06375 (ACKWPP_06375) rcrP 1222935..1224671 (-) 1737 WP_014637988.1 ABC transporter ATP-binding protein Regulator
  ACKWPP_RS06380 (ACKWPP_06380) - 1224747..1224989 (-) 243 WP_012028079.1 KH domain-containing protein -
  ACKWPP_RS06385 (ACKWPP_06385) rpsP 1225011..1225283 (-) 273 WP_002940682.1 30S ribosomal protein S16 -
  ACKWPP_RS06390 (ACKWPP_06390) - 1225408..1225716 (-) 309 WP_024402206.1 DUF4298 domain-containing protein -
  ACKWPP_RS06395 (ACKWPP_06395) pcp 1225716..1226363 (-) 648 WP_002940685.1 pyroglutamyl-peptidase I -
  ACKWPP_RS06400 (ACKWPP_06400) - 1226360..1227115 (-) 756 WP_012775077.1 class I SAM-dependent methyltransferase -

Sequence

Protein


Download         Length: 578 a.a.        Molecular weight: 65078.39 Da        Isoelectric Point: 5.1942

>NTDB_id=966852 ACKWPP_RS06375 WP_014637988.1 1222935..1224671(-) (rcrP) [Streptococcus suis strain KKAHC02]
MNLIWTYLKKYPKWIALDLLGALLFVVVNLGLPTFLARMIDQGITKNDVSQLYFWAGMMGLIVLLGIVGRVTLAYAAGKL
TTNIVKDIRNDLYEKIQDYSHHEYEQIGVSSLVARMTNDAFVLMQFSEMVLKLGIITPLMMIASVIMTLVTSPSLAWTVA
VAMPFLVFVIFYVATKTRPLSEKQQKRLDTINQYVRENLMGLRVIRAFTREEFQEERFESVNEEYTDISKKLFNLTGLTE
PLFVQIIIAMIVAIVWFALAPLQTGSLQIGDLVAFIEYSFHALFSFLLFANLFNMYPRMSVSSQRIQEVLDMPISISKNE
EGITETDTRGYLEFENVTFAYPGETESPVLHNISFKAKPGETIAFIGSTGSGKSSLVNLIPRFYDVTLGRILVDGVDVRR
YNLKALRSKIGFIPQKALLFTGTIAENLKYGKMDASLAELHDATDVAQAKEFIESKEEKFDTHLAEGGSNLSGGQKQRLS
IARAIVKQPDIYIFDDSFSALDYKTDAILRSRLKEVTENATVLIVAQRVGTIMDADQIIVLNEGEIVGRGTHNELMESNE
IYREIANSQLNRQSLTEE

Nucleotide


Download         Length: 1737 bp        

>NTDB_id=966852 ACKWPP_RS06375 WP_014637988.1 1222935..1224671(-) (rcrP) [Streptococcus suis strain KKAHC02]
ATGAATCTGATTTGGACCTATTTGAAAAAATATCCTAAGTGGATTGCCTTAGACTTGTTGGGGGCCTTATTGTTTGTAGT
GGTAAACTTGGGCTTGCCAACTTTTTTGGCTAGGATGATTGACCAAGGAATTACAAAGAACGATGTTAGTCAGCTCTATT
TCTGGGCGGGGATGATGGGATTGATTGTCCTGCTCGGGATTGTTGGTCGAGTGACACTTGCCTATGCAGCTGGAAAATTG
ACTACCAATATCGTCAAAGATATTCGAAATGATTTGTATGAGAAAATTCAGGACTATTCTCATCACGAATATGAGCAGAT
TGGTGTTTCTTCTCTAGTTGCTCGTATGACAAATGATGCTTTTGTTCTCATGCAATTCTCTGAAATGGTCTTAAAACTAG
GTATTATTACACCCTTGATGATGATTGCTTCTGTCATCATGACCTTGGTAACCAGTCCGAGCTTAGCCTGGACAGTAGCA
GTAGCCATGCCATTTTTGGTTTTCGTCATTTTTTATGTAGCTACTAAAACTCGTCCTCTTTCTGAAAAGCAACAAAAACG
ATTGGACACCATTAACCAATATGTTCGCGAAAATCTCATGGGCTTGCGTGTCATTCGTGCCTTTACTCGTGAGGAGTTTC
AAGAGGAGCGCTTTGAGTCGGTCAATGAGGAATATACCGATATTTCCAAAAAGCTCTTTAATCTGACTGGATTGACAGAG
CCGCTCTTTGTCCAGATTATTATTGCTATGATTGTAGCCATTGTCTGGTTCGCATTGGCTCCTTTGCAAACAGGCAGTCT
GCAAATCGGTGATTTGGTAGCCTTTATCGAATATAGTTTCCACGCGCTTTTCTCATTCTTGCTCTTTGCTAACTTGTTTA
ACATGTATCCACGTATGTCGGTATCGAGCCAACGGATTCAGGAAGTCTTGGACATGCCCATTTCCATTTCTAAGAATGAA
GAAGGTATTACTGAAACAGATACTCGTGGTTATTTGGAATTTGAAAATGTAACTTTTGCCTACCCTGGTGAAACGGAATC
GCCTGTGCTGCACAATATTTCCTTCAAAGCTAAGCCTGGTGAAACGATTGCCTTTATTGGTTCGACTGGTTCTGGTAAGT
CTTCCTTGGTCAACTTGATTCCACGTTTCTATGATGTGACACTTGGTCGTATCTTGGTGGACGGTGTGGATGTCAGACGC
TACAATCTAAAGGCACTCCGCAGCAAGATTGGCTTTATTCCGCAGAAAGCTCTGCTATTTACCGGAACTATCGCGGAAAA
CTTAAAGTACGGTAAGATGGATGCTAGTCTTGCAGAACTTCATGATGCGACGGATGTGGCTCAGGCTAAGGAGTTTATCG
AGAGTAAGGAAGAAAAATTCGACACCCATCTAGCAGAAGGTGGAAGCAACCTGTCAGGCGGGCAAAAGCAACGTTTGTCC
ATTGCACGTGCTATTGTGAAACAGCCCGATATTTATATTTTTGATGATTCTTTCTCAGCATTGGATTATAAGACGGATGC
AATTTTGCGGAGTCGTTTGAAGGAAGTGACGGAAAATGCGACGGTGCTAATTGTGGCACAACGTGTCGGAACCATTATGG
ATGCCGACCAGATCATCGTGCTGAACGAAGGTGAAATCGTTGGCCGCGGCACCCACAATGAATTGATGGAAAGCAATGAG
ATTTACCGAGAAATCGCCAATTCTCAGCTTAACCGTCAATCTCTGACAGAAGAATAG

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(20-280)

ABC transporter (ABC_tran)

(350-497)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

38.605

100

0.393