Detailed information    

insolico Bioinformatically predicted

Overview


Name   priA   Type   Machinery gene
Locus tag   ACKWPP_RS02745 Genome accession   NZ_CP176418
Coordinates   492708..495098 (+) Length   796 a.a.
NCBI ID   WP_409374156.1    Uniprot ID   -
Organism   Streptococcus suis strain KKAHC02     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 487708..500098
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKWPP_RS02715 (ACKWPP_02715) - 487881..488180 (+) 300 WP_409374153.1 hypothetical protein -
  ACKWPP_RS02720 (ACKWPP_02720) - 488183..488515 (+) 333 WP_409374154.1 phage holin -
  ACKWPP_RS02725 (ACKWPP_02725) - 488512..489231 (+) 720 WP_409374155.1 SH3 domain-containing protein -
  ACKWPP_RS02730 (ACKWPP_02730) - 489639..491252 (+) 1614 WP_024384085.1 ribonuclease Y -
  ACKWPP_RS02735 (ACKWPP_02735) gmk 491400..492026 (+) 627 WP_004194155.1 guanylate kinase -
  ACKWPP_RS02740 (ACKWPP_02740) rpoZ 492050..492364 (+) 315 WP_004194153.1 DNA-directed RNA polymerase subunit omega -
  ACKWPP_RS02745 (ACKWPP_02745) priA 492708..495098 (+) 2391 WP_409374156.1 primosomal protein N' Machinery gene
  ACKWPP_RS02750 (ACKWPP_02750) fmt 495230..496168 (+) 939 WP_024388030.1 methionyl-tRNA formyltransferase -
  ACKWPP_RS02755 (ACKWPP_02755) rsmB 496155..497468 (+) 1314 WP_409374157.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  ACKWPP_RS02760 (ACKWPP_02760) - 497506..498243 (+) 738 WP_004194145.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase -
  ACKWPP_RS02765 (ACKWPP_02765) pknB 498243..499901 (+) 1659 Protein_507 Stk1 family PASTA domain-containing Ser/Thr kinase -

Sequence


Protein


Download         Length: 796 a.a.        Molecular weight: 91048.90 Da        Isoelectric Point: 6.1960

>NTDB_id=966827 ACKWPP_RS02745 WP_409374156.1 492708..495098(+) (priA) [Streptococcus suis strain KKAHC02]
MLAQIIVDVPLMQTDQAYSYRVPAELEEGLKVGVRVHVPFGKGNRLIQGIVVDLIDENDENNLQDLKELAEVLDYSPVLN
QEQFWLADQMRRSVFSYKITLLKSMLPSLLNSTYDKLLRPGLGLEMAEQISLFGDKEQIRFSDLDVTEQGKIMRLAQSGK
ILVDYVAKDKKQIKTEKWYRVCLEKLREADISNRAKKRQQLREFLLEQSEDQLLSNLKSDYSADTLRYFQEKGYIEVWEE
EVSRTQGVFDKVEKTQALDLNPEQAIAVREIVASIGQESQTFLLQGVTGSGKTEVYLQVIDRVLKMGKTAIMLVPEISLT
PQMTNRFISRFGQQVAILHSGLSDGEKYDEWRKIEAGHAQVVVGARSAIFAPLTNLGVIIIDEEHEATYKQDSNPRYHAR
DVAKLRADYNRATLVLGSATPSLETRARASRGVYGRLTLNQRANPLARIPEVEVVDFRDYIGQQEASNFTPVLIDKIREK
LARKEQVVLMLNRRGYSSFVMCRDCGSVDQCPNCDISLTLHMDTKTMNCHYCGFQKGIPQTCPNCQSRSIRYYGTGTQKA
YDELQELLPEARILRMDVDTTKKKGAHEDLLERFGRGEADILLGTQMIAKGLDFPNVTLVGVLNADTALNLPDFRSSERT
FQLLTQVAGRAGRADKEGEVLIQTYNPNHYAIAFAKEQDYEGFYRYEMGIRKNLGYPPYYFTVGLTFSHKSEEFVVKKAY
ETVAFLRQHLTDAIQILGPTPKPIARTHNLYHYQIILKYRHEDRLEEVLNQILDWTQERENQDLRLIIDNEPQNMM

Nucleotide


Download         Length: 2391 bp        

>NTDB_id=966827 ACKWPP_RS02745 WP_409374156.1 492708..495098(+) (priA) [Streptococcus suis strain KKAHC02]
ATGTTAGCACAGATTATTGTAGACGTCCCTTTGATGCAGACAGATCAAGCTTATTCCTATCGAGTTCCAGCTGAGTTGGA
AGAGGGGCTCAAGGTTGGCGTGCGTGTCCATGTACCCTTTGGTAAGGGAAATCGGCTGATTCAAGGGATTGTAGTTGACT
TGATTGATGAAAATGACGAAAATAACTTACAAGACTTGAAAGAGCTTGCCGAGGTTTTGGACTATAGTCCTGTTCTCAAT
CAAGAGCAATTTTGGTTGGCGGACCAGATGAGAAGGTCGGTCTTCTCCTATAAAATTACCCTCTTAAAATCCATGTTGCC
TAGCTTGCTCAATTCGACCTATGACAAATTGCTCCGTCCAGGGCTTGGTTTGGAAATGGCAGAGCAGATTAGTCTGTTTG
GTGATAAGGAGCAGATTCGTTTTTCTGACTTGGACGTGACAGAGCAAGGGAAAATCATGCGTCTGGCCCAGTCAGGAAAA
ATCTTGGTAGACTATGTGGCCAAGGATAAGAAGCAAATCAAGACAGAAAAATGGTACCGAGTTTGTCTGGAGAAATTACG
AGAAGCAGACATTAGCAATCGGGCTAAAAAACGGCAGCAGTTAAGGGAATTTCTTCTGGAACAGTCGGAAGACCAGCTTC
TTTCAAACCTAAAATCGGACTATTCAGCTGATACGCTCCGCTATTTCCAAGAAAAGGGCTATATAGAAGTCTGGGAAGAG
GAAGTGTCGCGGACTCAGGGTGTTTTTGATAAGGTGGAAAAAACGCAGGCCTTGGATTTGAATCCAGAGCAGGCCATTGC
GGTTCGGGAGATTGTGGCCTCTATCGGTCAGGAAAGTCAGACATTTCTACTGCAAGGAGTGACAGGTTCTGGGAAGACGG
AAGTCTATCTCCAGGTTATTGATAGAGTCTTGAAAATGGGGAAAACGGCTATTATGCTGGTGCCTGAAATTTCCTTGACC
CCTCAGATGACCAATCGTTTTATTTCTCGTTTTGGCCAGCAGGTTGCCATTTTGCACTCGGGCTTGTCTGATGGTGAGAA
GTACGATGAGTGGCGGAAGATTGAGGCGGGGCATGCCCAGGTGGTTGTCGGGGCTCGTTCGGCTATTTTTGCCCCTTTGA
CAAACTTGGGTGTTATCATCATTGATGAGGAGCATGAAGCGACCTACAAGCAGGACAGCAATCCACGCTACCATGCGCGT
GATGTGGCGAAGTTGCGGGCTGATTATAATCGAGCGACCCTGGTCTTGGGGTCTGCTACGCCGAGTCTTGAAACACGGGC
TCGGGCTAGTCGGGGAGTCTATGGAAGACTGACTCTTAACCAGAGGGCCAATCCCTTGGCTCGTATTCCAGAAGTGGAAG
TGGTGGATTTCCGAGATTACATCGGTCAGCAGGAGGCTAGTAATTTTACCCCTGTTCTGATTGATAAGATAAGAGAAAAA
TTGGCTCGTAAGGAACAGGTCGTTCTTATGTTGAATCGGCGTGGTTATTCTTCTTTTGTCATGTGTCGTGATTGTGGTAG
CGTTGACCAGTGTCCCAACTGTGATATTTCCCTTACGCTCCATATGGACACAAAAACGATGAATTGCCATTATTGTGGTT
TTCAAAAGGGGATTCCTCAGACCTGTCCAAACTGTCAAAGTCGTTCTATTCGTTATTATGGGACGGGTACGCAAAAGGCC
TACGATGAATTGCAGGAACTCTTGCCAGAAGCTAGAATTTTGCGTATGGATGTGGATACTACCAAGAAAAAAGGTGCTCA
TGAGGACTTGCTCGAACGGTTTGGTCGAGGCGAAGCGGATATTCTTCTGGGAACTCAGATGATTGCCAAGGGCTTGGATT
TTCCAAATGTGACCCTAGTTGGGGTGCTCAATGCGGATACGGCTCTGAATTTGCCTGATTTTCGGTCTTCTGAGCGGACC
TTCCAGTTGCTGACTCAGGTAGCTGGTCGGGCTGGTCGAGCTGATAAGGAAGGGGAGGTCCTGATTCAGACCTATAACCC
CAATCATTATGCCATTGCTTTTGCCAAAGAGCAGGATTATGAAGGTTTCTATCGTTATGAGATGGGCATTCGGAAAAATC
TTGGTTATCCACCTTACTATTTTACGGTGGGTCTAACCTTTTCGCACAAGTCAGAAGAATTTGTCGTGAAAAAAGCCTAT
GAAACTGTAGCCTTTCTCCGTCAACACTTAACAGATGCAATTCAAATCTTGGGACCGACGCCCAAGCCTATTGCCAGAAC
TCATAATCTCTACCACTACCAGATCATCTTGAAATACCGGCATGAAGACCGTTTGGAAGAGGTATTGAATCAGATTTTGG
ATTGGACACAGGAGAGAGAAAATCAAGATTTGCGACTGATTATTGACAATGAACCGCAGAATATGATGTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Bacillus subtilis subsp. subtilis str. 168

47.708

100

0.484