Detailed information NTG0966820

Bioinformatically predicted

Overview

• Name: recD/recD2/recDB
• Type: Machinery gene
• Locus tag: ACKWPP_RS01140
• Genome accession: NZ_CP176418
• Coordinates: 197383..199872 (-)
• Length: 829 a.a.
• NCBI ID: WP_409374027.1
• Uniprot ID: -
• Organism: Streptococcus suis strain KKAHC02
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 192383..204872

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACKWPP_RS01110 (ACKWPP_01110)	-	192490..192918 (+)	429	WP_409374376.1	transposase	-
ACKWPP_RS01115 (ACKWPP_01115)	dinB	193102..194169 (+)	1068	WP_409374024.1	DNA polymerase IV	-
ACKWPP_RS01120 (ACKWPP_01120)	-	194213..194632 (+)	420	WP_015646348.1	Rrf2 family transcriptional regulator	-
ACKWPP_RS01125 (ACKWPP_01125)	-	194767..195393 (+)	627	WP_409374025.1	NAD(P)-dependent oxidoreductase	-
ACKWPP_RS01130 (ACKWPP_01130)	-	195497..196417 (+)	921	WP_409374026.1	1-phosphofructokinase family hexose kinase	-
ACKWPP_RS01135 (ACKWPP_01135)	-	196465..197103 (+)	639	Protein_190	endonuclease III domain-containing protein	-
ACKWPP_RS01140 (ACKWPP_01140)	recD/recD2/recDB	197383..199872 (-)	2490	WP_409374027.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ACKWPP_RS01145 (ACKWPP_01145)	lepB	200078..200707 (-)	630	WP_409374028.1	signal peptidase I	-
ACKWPP_RS01150 (ACKWPP_01150)	rnhC	200717..201607 (-)	891	WP_409374029.1	ribonuclease HIII	-
ACKWPP_RS01155 (ACKWPP_01155)	-	201692..202675 (+)	984	WP_409374030.1	Gfo/Idh/MocA family protein	-
ACKWPP_RS01160 (ACKWPP_01160)	-	203024..204364 (+)	1341	WP_409374031.1	LysM peptidoglycan-binding domain-containing protein	-

Sequence

Protein

• Length: 829 a.a.
• Molecular weight: 93026.36 Da
• Isoelectric Point: 4.5797

>NTDB_id=966820 ACKWPP_RS01140 WP_409374027.1 197383..199872(-) (recD/recD2/recDB) [Streptococcus suis strain KKAHC02]
MNEVYFTGTIDRIIFENPSNFYKILLLEIEETDADYDDYEIIVTGTIADVIEGEDYRFYGNLVTHPKYGQQLQISRYERS
KPTSAGLVKYFSSEHFKGIGRKTAEKIVELYGEDTIDKILAEPEKLTQITGLSSKNMQAFVEKLRLNYGTELILAKLAEY
GIPNKLAFQIQDQYKEKTLQIIEENPYQLVEDVQGLGFTIADRIAENLGIASDSPQRFRAGMLFSLIHRSMETGDTYVEA
RDLLEATLELLEKSRHTELDPAAVAKELTGLIADDKVQQEGTKIFDNSLYFAEHGIHKNLTRLMGKNGFKPFPRADVEAA
IAELESMSSLTYDDIQKEAIVQAITNPLFILTGGPGTGKTTVINGIIAVYAILHKIDLTRNREECPVLLAAPTGRAARRM
NELTGLPSATIHRHLGLVEGQEESYRDDYLEADFIIVDEFSMVDTWLANQLFQNISSQTQVLIVGDAEQLPSVSPGQVLA
DLLKIDKLPSITLERIYRQSDDSTIVTLASQIRQGALPSDFREKKADRSYFEAQNEQIPALIERIVGAAIKSGIPANEVQ
ILAPMYRGAAGIDQLNTMTQALLNPLEEGELEFLHNEQAFRQGDRVIHLVNDAEANVFNGDLGYITDLLPAKYTDSKQDE
ITINFDGSEVTYPRNEWYKITLAYAMSIHKSQGSEFQVVILPITRTSHRMLQRNLVYTAITRSKSKLILLGEISAFDYAV
KNAGTVRKTYLVPRFQGEMAEQDSKEALAEKAESKTATTTQTQPPTQPDRKEQVKVVKENNQQLSLLGQDQLEKTSPQPT
EYILTVDNLLTIDPMIGIEQADIEEFFKA

Nucleotide

• Length: 2490 bp

>NTDB_id=966820 ACKWPP_RS01140 WP_409374027.1 197383..199872(-) (recD/recD2/recDB) [Streptococcus suis strain KKAHC02]
ATGAACGAAGTGTATTTTACCGGTACTATTGACCGAATTATTTTTGAAAATCCTAGTAATTTTTATAAAATCCTTCTCCT
TGAAATCGAGGAGACAGACGCAGACTATGATGACTACGAAATTATTGTGACCGGAACGATTGCCGATGTCATTGAAGGAG
AAGACTATCGTTTCTATGGCAATCTGGTCACCCATCCCAAGTATGGTCAGCAGCTGCAAATTTCGCGTTACGAACGCAGC
AAGCCTACCTCAGCTGGTCTAGTCAAGTACTTCTCCAGCGAGCATTTCAAGGGAATTGGACGCAAAACAGCTGAAAAAAT
CGTTGAGCTCTATGGCGAAGATACCATTGATAAGATTTTAGCTGAACCTGAAAAACTAACCCAAATCACAGGCCTATCCA
GCAAGAACATGCAGGCATTTGTGGAGAAACTCCGCCTCAATTATGGAACCGAGTTGATCTTGGCAAAACTAGCCGAGTAT
GGTATTCCCAATAAATTGGCCTTTCAAATCCAAGACCAATATAAAGAAAAAACGCTTCAGATTATTGAAGAAAATCCCTA
TCAACTGGTCGAAGATGTCCAGGGGCTCGGCTTTACCATTGCCGATAGGATTGCGGAAAACCTGGGAATTGCCAGTGATT
CACCCCAACGTTTTCGGGCTGGTATGCTCTTTAGCCTCATTCATCGCTCCATGGAAACAGGCGATACCTATGTGGAGGCC
AGAGACTTGCTGGAAGCAACCCTTGAACTGCTGGAAAAATCCCGCCATACAGAGCTAGACCCCGCTGCTGTTGCCAAAGA
ATTGACGGGACTGATTGCAGACGACAAGGTACAGCAAGAAGGCACAAAGATTTTTGACAACAGCCTCTACTTTGCCGAAC
ATGGTATCCATAAAAACCTGACCCGCCTGATGGGAAAAAATGGTTTCAAACCCTTCCCACGCGCAGACGTTGAGGCTGCC
ATAGCAGAGCTGGAAAGCATGTCTTCTCTCACCTACGATGACATTCAAAAAGAAGCCATCGTCCAAGCCATTACCAATCC
GCTTTTCATTCTGACAGGCGGACCAGGGACTGGAAAAACAACGGTTATCAACGGTATTATCGCGGTCTATGCCATCTTGC
ATAAGATTGACCTGACTCGCAACCGAGAAGAATGCCCAGTCCTCCTAGCCGCTCCAACTGGACGAGCAGCCAGACGGATG
AATGAATTGACAGGTCTGCCTTCCGCCACCATCCACCGCCACCTCGGTCTGGTAGAAGGACAGGAAGAATCCTACCGAGA
TGATTACCTCGAAGCTGACTTCATCATCGTGGATGAGTTTTCTATGGTCGACACTTGGTTGGCAAACCAGCTCTTCCAGA
ACATCTCATCCCAAACCCAAGTTCTGATTGTCGGCGATGCGGAGCAATTACCTTCCGTCAGTCCCGGTCAGGTCCTTGCT
GACCTCTTGAAAATTGATAAGCTACCCAGCATCACTCTAGAACGTATCTATCGTCAATCCGATGATTCGACCATTGTTAC
CCTAGCCAGCCAGATTCGCCAAGGGGCTCTGCCTAGTGATTTCCGTGAGAAAAAGGCTGACCGCTCCTATTTTGAAGCGC
AAAACGAACAAATTCCAGCCCTGATTGAGCGCATTGTCGGCGCAGCTATCAAGTCAGGTATTCCTGCAAACGAAGTACAA
ATCCTCGCTCCCATGTACCGTGGTGCTGCAGGTATTGACCAACTCAACACCATGACCCAGGCCCTGCTCAATCCACTGGA
AGAGGGAGAGTTAGAATTCCTCCATAACGAGCAAGCCTTCCGCCAAGGCGACCGGGTCATTCATCTAGTCAACGACGCCG
AAGCCAATGTCTTCAATGGCGACTTGGGCTACATCACCGACCTCCTACCTGCCAAGTATACCGACTCCAAGCAGGACGAG
ATTACCATCAACTTCGACGGCAGCGAGGTCACCTATCCTCGAAACGAATGGTACAAGATTACCCTGGCCTATGCTATGTC
CATCCACAAGTCCCAAGGTAGTGAGTTCCAGGTCGTTATCCTTCCTATCACTCGCACCAGCCACCGTATGCTCCAGCGCA
ATCTGGTCTACACCGCCATCACCCGCTCCAAGAGCAAGCTCATCCTCCTGGGCGAAATCTCCGCCTTCGACTACGCCGTC
AAAAACGCCGGAACCGTCCGAAAAACCTATCTGGTCCCACGTTTCCAAGGGGAAATGGCAGAGCAGGATAGCAAGGAAGC
TTTAGCTGAAAAAGCCGAAAGCAAAACAGCTACAACCACGCAAACCCAGCCCCCTACTCAGCCAGACAGAAAAGAACAGG
TTAAAGTAGTCAAAGAAAACAACCAACAACTCTCCCTTCTTGGCCAAGACCAACTAGAAAAAACAAGTCCCCAACCCACA
GAATACATTTTGACTGTAGATAACCTACTAACCATCGACCCCATGATTGGCATAGAACAGGCAGATATTGAAGAATTTTT
TAAAGCATAA

Domains

Predicted by InterProScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (575-645)

• AAA domain (AAA_30) (332-529)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (663-710)

• Helix-hairpin-helix containing domain (HHH_RecD2) (148-237)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD/recD2/recDB	Bacillus subtilis subsp. subtilis str. 168	41.842	91.677	0.384