Detailed information NTG0966072

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: NSQ79_RS00990
• Genome accession: NZ_CP150200
• Coordinates: 178108..179037 (+)
• Length: 309 a.a.
• NCBI ID: WP_045771698.1
• Uniprot ID: A0AAP3Q7D9
• Organism: Streptococcus sp. FSL W7-1342
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 173108..184037

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NSQ79_RS00970 (NSQ79_00970)	-	173319..174965 (+)	1647	WP_014633665.1	peptide ABC transporter substrate-binding protein	-
NSQ79_RS00975 (NSQ79_00975)	-	175096..176010 (+)	915	WP_045001977.1	ABC transporter permease	-
NSQ79_RS00980 (NSQ79_00980)	-	176018..177052 (+)	1035	WP_045001975.1	ABC transporter permease	-
NSQ79_RS00985 (NSQ79_00985)	oppD	177066..178106 (+)	1041	WP_014633662.1	ABC transporter ATP-binding protein	Regulator
NSQ79_RS00990 (NSQ79_00990)	amiF	178108..179037 (+)	930	WP_045771698.1	ATP-binding cassette domain-containing protein	Regulator
NSQ79_RS00995 (NSQ79_00995)	-	179164..179523 (+)	360	WP_002883594.1	hypothetical protein	-
NSQ79_RS01000 (NSQ79_01000)	hslO	179603..180469 (+)	867	WP_045769213.1	Hsp33 family molecular chaperone HslO	-
NSQ79_RS01005 (NSQ79_01005)	dusB	180462..181439 (+)	978	WP_002883588.1	tRNA dihydrouridine synthase DusB	-
NSQ79_RS01010 (NSQ79_01010)	-	181603..182046 (+)	444	WP_045771699.1	zinc-dependent MarR family transcriptional regulator	-
NSQ79_RS01015 (NSQ79_01015)	-	182048..182755 (+)	708	WP_002883613.1	metal ABC transporter ATP-binding protein	-
NSQ79_RS01020 (NSQ79_01020)	-	182748..183560 (+)	813	WP_045769215.1	metal ABC transporter permease	-

Sequence

Protein

• Length: 309 a.a.
• Molecular weight: 34941.72 Da
• Isoelectric Point: 6.5085

>NTDB_id=966072 NSQ79_RS00990 WP_045771698.1 178108..179037(+) (amiF) [Streptococcus sp. FSL W7-1342]
MTQERKKLVELKNVSLTFNKGKSNEVKAIDDVSFDIYEGEIFGLVGESGSGKTTIGRSILKLYDIDSGTVTFAGNDISSL
KGKDLHDFRKTAQMIFQDPQASLNGRMKIRDIIAEGIDIHKLAKSKEEREAKVKELINLVGLNEDHLSRYPHEFSGGQRQ
RIGIARALAVNPHFIVADEPISALDVSIQAQVVNLMQKLQHEQGLTYLFIAHDLSMVKYISDRIGVMHWGKLLEVGPADE
IYHNPIHPYTKSLLSAIPEPDPERERKRQHLIYDSSIENDGEKRQMYEIRPGHFVYATEAEAKNYKEEA

Nucleotide

• Length: 930 bp

>NTDB_id=966072 NSQ79_RS00990 WP_045771698.1 178108..179037(+) (amiF) [Streptococcus sp. FSL W7-1342]
ATGACACAAGAACGTAAGAAGTTAGTAGAATTAAAAAATGTGTCTCTAACTTTTAATAAAGGAAAATCAAACGAAGTTAA
GGCCATTGATGACGTTAGCTTTGATATCTATGAGGGCGAAATTTTCGGCCTAGTTGGAGAATCTGGTTCAGGTAAAACGA
CCATTGGGCGTTCTATTCTAAAGCTTTATGATATTGATTCGGGTACTGTTACCTTTGCTGGTAATGATATATCAAGTTTA
AAAGGGAAAGACCTTCATGATTTCCGTAAGACAGCTCAGATGATTTTTCAAGATCCTCAAGCTAGTCTTAATGGACGAAT
GAAGATTCGTGATATTATTGCTGAGGGGATTGATATTCATAAATTGGCTAAATCCAAGGAAGAACGTGAAGCCAAGGTTA
AAGAACTTATTAATTTGGTGGGATTAAATGAAGATCACTTATCAAGATATCCTCATGAATTTTCTGGTGGTCAGCGTCAA
AGAATTGGTATTGCGCGTGCTTTAGCGGTCAATCCTCATTTTATTGTAGCAGACGAACCTATCTCTGCTTTAGATGTTTC
TATTCAAGCACAAGTAGTTAATTTGATGCAAAAGTTACAACACGAACAGGGGTTAACTTATTTGTTTATTGCACATGACT
TGTCAATGGTTAAATATATATCCGATCGTATTGGTGTAATGCATTGGGGTAAACTTCTTGAGGTAGGACCAGCAGATGAG
ATTTACCATAATCCGATCCATCCTTATACAAAGAGTTTATTGTCTGCCATTCCAGAACCAGACCCAGAAAGAGAGCGTAA
ACGTCAACATTTGATTTATGATTCCTCTATTGAAAATGATGGGGAAAAGAGACAAATGTATGAAATCCGACCAGGACATT
TTGTTTATGCTACAGAAGCAGAGGCTAAAAATTATAAAGAAGAAGCCTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-265)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.754	98.706	0.54
amiF	Streptococcus thermophilus LMG 18311	54.426	98.706	0.537
amiF	Streptococcus salivarius strain HSISS4	54.098	98.706	0.534