Detailed information NTG0096607

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: AABJ90_RS07235
• Genome accession: NZ_AP028964
• Coordinates: 1421095..1422360 (-)
• Length: 421 a.a.
• NCBI ID: WP_015714437.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain NA05 = NBRC 116153
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1416095..1427360

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABJ90_RS07210 (BsubNA05_13890)	yrzK	1416338..1416508 (+)	171	WP_004399157.1	YrzK family protein	-
AABJ90_RS07215 (BsubNA05_13900)	hisS	1416890..1418164 (+)	1275	WP_326227525.1	histidine--tRNA ligase	-
AABJ90_RS07220 (BsubNA05_13910)	aspS	1418178..1419956 (+)	1779	WP_015384241.1	aspartate--tRNA ligase	-
AABJ90_RS07230 (BsubNA05_13920)	tcdA	1420291..1421055 (+)	765	WP_338382578.1	tRNA threonylcarbamoyladenosine dehydratase	-
AABJ90_RS07235 (BsubNA05_13930)	rarA	1421095..1422360 (-)	1266	WP_015714437.1	replication-associated recombination protein A	Machinery gene
AABJ90_RS07240 (BsubNA05_13940)	cymR	1422563..1422979 (+)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
AABJ90_RS07245 (BsubNA05_13950)	iscSA	1422998..1424140 (+)	1143	WP_003229769.1	cysteine desulfurase family protein	-
AABJ90_RS07250 (BsubNA05_13960)	mnmA	1424168..1425283 (+)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
AABJ90_RS07255 (BsubNA05_13970)	yrrB	1425369..1425989 (+)	621	WP_015251572.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46500.35 Da
• Isoelectric Point: 7.2043

>NTDB_id=96607 AABJ90_RS07235 WP_015714437.1 1421095..1422360(-) (rarA) [Bacillus subtilis strain NA05 = NBRC 116153]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=96607 AABJ90_RS07235 WP_015714437.1 1421095..1422360(-) (rarA) [Bacillus subtilis strain NA05 = NBRC 116153]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAACATCGGGGCCTTGGCACCTATTCAGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCTCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAATTCGAATCCGCCTTAAAGCAGGTGTATGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.762	100	0.998