Detailed information NTG0965487

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: NSQ22_RS13390
• Genome accession: NZ_CP150187
• Coordinates: 2621404..2623767 (-)
• Length: 787 a.a.
• NCBI ID: WP_008881020.1
• Uniprot ID: A0A0Q0ZBY2
• Organism: Geobacillus sp. FSL K6-3411
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2616404..2628767

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NSQ22_RS13365 (NSQ22_13365)	alaS	2616415..2619051 (-)	2637	WP_236934280.1	alanine--tRNA ligase	-
NSQ22_RS13370 (NSQ22_13370)	-	2619368..2620429 (-)	1062	WP_008881016.1	AI-2E family transporter	-
NSQ22_RS13375 (NSQ22_13375)	-	2620552..2620686 (-)	135	WP_008881017.1	YrzQ family protein	-
NSQ22_RS13380 (NSQ22_13380)	-	2620698..2620889 (-)	192	WP_008881018.1	hypothetical protein	-
NSQ22_RS13385 (NSQ22_13385)	-	2620905..2621378 (-)	474	WP_008881019.1	PRC-barrel domain-containing protein	-
NSQ22_RS13390 (NSQ22_13390)	recD2	2621404..2623767 (-)	2364	WP_008881020.1	ATP-dependent RecD-like DNA helicase	Machinery gene
NSQ22_RS13395 (NSQ22_13395)	-	2623785..2624447 (-)	663	WP_008881021.1	tetratricopeptide repeat protein	-
NSQ22_RS13400 (NSQ22_13400)	mnmA	2624556..2625671 (-)	1116	WP_081156967.1	tRNA 2-thiouridine(34) synthase MnmA	-
NSQ22_RS13405 (NSQ22_13405)	-	2625685..2626827 (-)	1143	WP_008881023.1	cysteine desulfurase family protein	-
NSQ22_RS13410 (NSQ22_13410)	-	2626850..2627266 (-)	417	WP_008881024.1	Rrf2 family transcriptional regulator	-
NSQ22_RS13415 (NSQ22_13415)	-	2627266..2627922 (-)	657	WP_060476075.1	membrane protein	-

Sequence

Protein

• Length: 787 a.a.
• Molecular weight: 86348.70 Da
• Isoelectric Point: 4.9895

>NTDB_id=965487 NSQ22_RS13390 WP_008881020.1 2621404..2623767(-) (recD2) [Geobacillus sp. FSL K6-3411]
MQEQQSLALDGRTFIKGVCLAVIFHNEETLYTVVRIRVEETNEAAAEEEVVVTGYFPRLNEGDVYIFYGQFRQHPRFGRQ
YAAEQFRKQLPNTKEGVIDYLSSGLFKGIGKKTATAIVDALGENAIAAILRDPGALERVPKLTKQKAKQLYETLCAHEGL
EQTMIALAQLGFGPQLAMKIYQVYGEETMDIIHENPYKLVEDIEGIGFGRADELGRQLGISGSHPARLRAACLFVLEQAC
LQEGHVYMKKEELVSRIGELLGGRSNGAVDGQAIEQTLLMLSEEGKMIAEQGRYYLPSLYFAEKGIASNIRRLLGQTPPS
ASFPESEFLLALGALEERLGMQYAPQQKEAIQRALSSPLFILTGGPGTGKTTVIKGIVELFAVLNGISLSPDDYKNGEPF
PVLLAAPTGRAAKRMSEATGLPAATIHRLLGWNGAEGFSHDENEPIAGKLLVVDEVSMVDTWLANHLLKAVPNGMQVIFV
GDEDQLPSVGPGQVLKDLLESGVIPSVRLTEVYRQAEGSSIIELAHEMKRGNVPADLTAPKADRSFIRCRAGQVASVVRQ
IAENARNKGFSVKDIQVLAPMYRGPAGIDQLNKVLQELFNPPTDGKRELSVGDVVYRVGDKVLQLVNQPEDNVFNGDIGE
VVAIFYAKENTEKQDLLVVSFDGIEVTYTRQDLAQITHAYCCSVHKAQGSEFPIVILPVVKSYYRMLKRNLLYTAVTRSK
QFLILCGEEEAFRFGVAQRGDGARQTALAEKLAASTALFVEGELPLEDANIGMENVTPYDFMDDGSS

Nucleotide

• Length: 2364 bp

>NTDB_id=965487 NSQ22_RS13390 WP_008881020.1 2621404..2623767(-) (recD2) [Geobacillus sp. FSL K6-3411]
TTGCAAGAGCAGCAATCGCTTGCGCTGGACGGCCGCACGTTTATTAAAGGGGTGTGTTTGGCCGTCATTTTTCATAACGA
GGAGACGTTGTATACCGTTGTCCGTATCCGCGTCGAAGAAACGAATGAAGCGGCTGCGGAGGAAGAAGTGGTCGTCACCG
GCTATTTTCCACGTTTAAATGAAGGGGACGTGTACATCTTTTACGGGCAATTCCGCCAACATCCGCGCTTTGGCCGCCAG
TATGCGGCCGAGCAGTTCCGCAAACAGCTTCCGAACACAAAAGAAGGAGTCATCGATTATTTGTCGAGCGGCTTGTTTAA
GGGGATCGGCAAAAAAACAGCGACAGCGATTGTCGATGCGCTTGGTGAAAACGCGATCGCCGCCATTTTGCGTGATCCAG
GGGCACTCGAACGTGTGCCCAAGCTGACGAAACAAAAAGCGAAGCAATTGTACGAAACGCTCTGCGCCCACGAAGGGCTC
GAGCAGACGATGATCGCCCTCGCTCAGCTCGGTTTTGGTCCACAGCTGGCAATGAAAATTTACCAAGTATACGGCGAAGA
GACAATGGACATCATTCATGAAAACCCGTACAAGCTCGTCGAAGATATTGAAGGGATCGGTTTTGGTCGCGCCGATGAGC
TCGGGCGGCAGCTCGGCATTTCCGGCAGTCATCCAGCCCGGCTGCGCGCCGCTTGTCTGTTTGTCCTTGAGCAGGCATGC
TTGCAAGAAGGACACGTCTACATGAAGAAAGAAGAGCTCGTCAGCCGCATTGGGGAGCTGCTTGGCGGAAGGTCGAACGG
GGCGGTTGATGGACAAGCTATCGAACAGACGCTCCTTATGTTAAGCGAAGAAGGAAAGATGATCGCGGAACAAGGCCGCT
ATTATCTTCCTTCGCTTTACTTCGCCGAAAAAGGGATCGCTTCTAACATTCGGCGGTTGCTCGGGCAAACGCCACCATCG
GCCTCATTTCCGGAGTCGGAGTTTTTGCTGGCGCTCGGGGCGCTTGAAGAACGACTCGGGATGCAATATGCTCCGCAGCA
AAAAGAAGCGATTCAACGGGCGCTGTCTTCGCCGCTCTTTATTTTGACGGGAGGTCCAGGAACAGGAAAAACAACGGTCA
TTAAAGGAATTGTTGAGCTGTTTGCGGTTCTAAATGGCATATCACTTTCCCCCGACGATTACAAAAACGGTGAACCGTTT
CCTGTGCTGCTCGCTGCTCCGACTGGACGGGCTGCAAAGCGGATGAGTGAGGCGACCGGGCTGCCGGCGGCGACGATTCA
CCGGCTGCTCGGCTGGAATGGAGCGGAAGGGTTCAGCCACGATGAAAATGAGCCGATTGCCGGTAAGCTGCTTGTCGTCG
ATGAGGTGTCGATGGTCGATACGTGGTTGGCTAATCACCTGTTAAAAGCGGTGCCTAATGGGATGCAAGTCATCTTCGTT
GGCGATGAAGACCAGCTTCCATCCGTCGGGCCAGGGCAAGTGTTGAAAGATTTGCTCGAGTCGGGTGTTATCCCGTCCGT
GCGGCTGACCGAGGTGTACCGCCAGGCGGAAGGGTCATCGATTATCGAGCTCGCCCATGAGATGAAGCGTGGGAACGTGC
CGGCCGACTTGACTGCCCCGAAGGCGGATCGTTCGTTCATCCGCTGCCGCGCCGGACAAGTGGCTAGTGTCGTGCGTCAA
ATCGCCGAAAATGCGCGTAACAAAGGGTTTTCCGTCAAAGACATTCAAGTGCTCGCTCCGATGTACCGCGGCCCAGCCGG
TATCGATCAGCTAAACAAAGTGCTGCAGGAGCTGTTTAATCCACCAACGGATGGGAAGCGAGAACTTTCCGTTGGCGACG
TAGTGTATCGCGTCGGCGATAAAGTGCTCCAGCTCGTCAATCAACCGGAAGACAACGTGTTTAACGGCGATATCGGTGAA
GTCGTGGCCATTTTTTATGCCAAAGAAAATACAGAAAAGCAAGATTTGCTCGTCGTCTCATTTGACGGCATTGAAGTGAC
GTATACAAGGCAAGATTTAGCGCAAATTACCCATGCATATTGCTGCTCCGTCCATAAGGCGCAAGGGAGCGAGTTTCCGA
TTGTCATTTTGCCTGTTGTCAAAAGTTATTACCGGATGTTGAAGCGGAATTTGTTGTATACGGCGGTGACAAGAAGCAAA
CAATTTCTGATTTTATGCGGGGAGGAAGAAGCATTCCGGTTTGGTGTTGCCCAGCGGGGCGACGGAGCGCGCCAGACGGC
GCTTGCAGAAAAGTTGGCGGCTTCGACTGCGCTGTTTGTCGAAGGGGAACTGCCGCTTGAGGATGCGAACATCGGGATGG
AAAACGTTACGCCGTATGACTTTATGGACGATGGGTCAAGCTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (591-661)

• AAA domain (AAA_30) (342-549)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-247)

• Helix-hairpin-helix domain (HHH_5) (107-153)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (678-726)

3D structure

• AlphaFold DB: A0A0Q0ZBY2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	59.925	100	0.606