Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   NYE79_RS08780 Genome accession   NZ_CP150168
Coordinates   1796715..1798484 (-) Length   589 a.a.
NCBI ID   WP_216728586.1    Uniprot ID   -
Organism   Streptococcus sp. FSL W8-0197     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1791715..1803484
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE79_RS08750 (NYE79_08750) - 1792314..1792679 (-) 366 WP_000216434.1 Asp23/Gls24 family envelope stress response protein -
  NYE79_RS08755 (NYE79_08755) rpmB 1792832..1793020 (-) 189 WP_001140948.1 50S ribosomal protein L28 -
  NYE79_RS08760 (NYE79_08760) - 1793125..1793799 (-) 675 WP_216728584.1 hypothetical protein -
  NYE79_RS08765 (NYE79_08765) - 1793805..1794251 (-) 447 WP_000776591.1 LytTR family DNA-binding domain-containing protein -
  NYE79_RS08770 (NYE79_08770) - 1794365..1794868 (-) 504 WP_125825649.1 phosphatase PAP2 family protein -
  NYE79_RS08775 (NYE79_08775) rcrQ 1794965..1796725 (-) 1761 WP_216728585.1 ABC transporter transmembrane domain-containing protein Regulator
  NYE79_RS08780 (NYE79_08780) rcrP 1796715..1798484 (-) 1770 WP_216728586.1 ATP-binding cassette domain-containing protein Regulator
  NYE79_RS08785 (NYE79_08785) - 1798468..1798929 (-) 462 WP_000360526.1 MarR family winged helix-turn-helix transcriptional regulator -
  NYE79_RS08790 (NYE79_08790) - 1799122..1799826 (+) 705 WP_216728587.1 CD20-like domain-containing protein -
  NYE79_RS08795 (NYE79_08795) - 1799876..1800592 (-) 717 WP_000532894.1 YebC/PmpR family DNA-binding transcriptional regulator -
  NYE79_RS08800 (NYE79_08800) - 1800689..1802059 (-) 1371 WP_065371556.1 MATE family efflux transporter -
  NYE79_RS08805 (NYE79_08805) - 1802169..1802723 (+) 555 WP_070656881.1 GNAT family N-acetyltransferase -
  NYE79_RS08810 (NYE79_08810) - 1802855..1803049 (-) 195 WP_000415528.1 PspC domain-containing protein -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 65352.88 Da        Isoelectric Point: 8.0074

>NTDB_id=964632 NYE79_RS08780 WP_216728586.1 1796715..1798484(-) (rcrP) [Streptococcus sp. FSL W8-0197]
MKKLAKRITGKEWGMIVLTILFTCFSVYLELEVPTYISQITELLGTSGTQMDALWSPAAKMIGLSLLAFFSSVMVGFFAA
RVAASYTTHLRRDVFHRVLDFSQTEIKRFSIPSLLTRTTNDITQVQMLFTMGLQVVTRGPIMAIWAIGKILGKSEYWLWA
VLVAVIVNVLMTTVLMTLAFPKQSVIQKLTDKLNSITRESLTGIRVVRAYNAEDYQGKKFEAANDEVTRLNLFVNRLMAI
MNPIMMAISSGLSLAIYWIGAYIINDASLTERLPLFSDMVVFMSYAMQVVMGFLLMGALFIVLPRTLVSAGRINQVLDLH
PSIKNPSQAQAADSSVQGQVEFRDVTFRYSQNSEAVVEHVTFKAEAGQTVAFIGSTGSGKSTLVNLIPRFYDVSSGQILV
DGVDVQDYNLEDLRNKVGYIPQKAVLFSGDVKGNLDFGKSKESPLSEPAMWQALELAQSKNFIEDKEAGLASEVAQGGTN
FSGGQRQRLAIARALARKPEILIFDDSFSALDYKTDRVLRQELAEKTKSMTKIIVAQRISTIMDADLILVLDQGKVVGQG
THKELLATNEVYQEIAYSQLSKEELEHGK

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=964632 NYE79_RS08780 WP_216728586.1 1796715..1798484(-) (rcrP) [Streptococcus sp. FSL W8-0197]
ATGAAGAAACTCGCTAAACGTATTACAGGAAAAGAGTGGGGAATGATCGTCCTTACGATTCTGTTCACTTGTTTCTCGGT
CTATCTAGAGTTAGAGGTACCGACCTACATTTCGCAAATTACAGAATTACTGGGAACGTCAGGGACACAGATGGATGCAC
TCTGGTCACCAGCTGCGAAGATGATTGGTTTGTCTTTATTGGCTTTCTTTTCATCTGTTATGGTTGGTTTCTTTGCCGCT
CGCGTTGCAGCATCCTATACAACCCATCTACGTAGAGACGTATTTCATCGTGTTTTAGATTTTTCGCAGACAGAGATCAA
GCGCTTTTCAATCCCAAGTCTTTTGACTCGGACGACCAATGATATTACCCAGGTACAGATGCTCTTTACCATGGGCTTGC
AAGTGGTTACTCGTGGGCCAATTATGGCTATCTGGGCCATTGGAAAAATCCTTGGGAAATCGGAATACTGGCTCTGGGCG
GTCCTTGTGGCTGTTATTGTGAATGTCTTGATGACCACCGTTCTTATGACTCTGGCTTTTCCTAAACAATCTGTCATCCA
AAAATTGACAGATAAACTCAATAGTATCACTCGTGAAAGTTTGACTGGGATTCGAGTTGTTCGCGCATACAATGCCGAGG
ATTACCAAGGTAAGAAATTTGAAGCAGCTAACGATGAGGTAACACGTCTCAATCTCTTTGTCAATCGATTGATGGCCATT
ATGAACCCGATCATGATGGCGATTTCCAGTGGATTGAGTTTAGCCATTTACTGGATTGGTGCCTATATCATCAACGATGC
AAGTTTGACAGAACGTCTGCCACTCTTTAGTGATATGGTAGTCTTCATGTCCTATGCTATGCAGGTCGTGATGGGCTTCC
TTCTCATGGGAGCACTCTTTATCGTTCTTCCTCGGACCTTGGTTTCTGCAGGACGTATCAACCAAGTTTTGGATTTGCAT
CCTTCTATTAAGAATCCGAGTCAAGCACAGGCTGCAGATTCTTCAGTTCAAGGACAAGTGGAATTCCGTGATGTAACCTT
CCGATACTCTCAAAACTCAGAAGCAGTTGTGGAACATGTTACTTTTAAAGCCGAAGCAGGTCAAACAGTTGCCTTTATCG
GATCAACTGGATCTGGGAAATCTACTCTAGTCAACCTAATACCTCGTTTTTATGATGTCTCATCTGGTCAAATCCTAGTA
GATGGTGTCGATGTGCAAGATTACAACTTGGAAGACTTGCGTAATAAGGTCGGCTATATCCCACAAAAAGCTGTGCTCTT
TTCTGGAGATGTTAAGGGTAATCTCGACTTTGGTAAGAGTAAAGAAAGTCCTCTCAGCGAACCTGCTATGTGGCAAGCTT
TGGAATTGGCTCAATCTAAGAACTTTATCGAGGATAAGGAAGCAGGTCTTGCATCAGAAGTAGCCCAAGGTGGAACCAAC
TTCTCAGGAGGTCAAAGACAGCGTTTGGCCATTGCGCGTGCCTTGGCTCGTAAACCAGAGATTCTCATCTTTGATGATTC
CTTCTCAGCCTTGGACTACAAGACAGATCGTGTCCTACGCCAAGAGCTAGCCGAGAAAACAAAATCCATGACCAAGATCA
TCGTAGCGCAACGGATTTCTACCATTATGGACGCCGACCTGATCTTAGTTTTGGATCAAGGTAAAGTCGTGGGACAAGGC
ACCCACAAGGAACTTCTTGCAACCAACGAAGTCTACCAAGAAATTGCCTACTCACAACTATCGAAGGAGGAATTGGAACA
TGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(358-507)

ABC transporter transmembrane region (ABC_membrane)

(17-292)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

64.725

100

0.66

Multiple sequence alignment