Detailed information NTG0963237

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: NSQ77_RS00465
• Genome accession: NZ_CP150144
• Coordinates: 91979..94297 (-)
• Length: 772 a.a.
• NCBI ID: WP_339228237.1
• Uniprot ID: -
• Organism: Oceanobacillus sp. FSL K6-2867
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 86979..99297

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NSQ77_RS00445 (NSQ77_00445)	-	87214..87480 (-)	267	WP_339228233.1	IreB family regulatory phosphoprotein	-
NSQ77_RS00450 (NSQ77_00450)	alaS	87650..90295 (-)	2646	WP_339228234.1	alanine--tRNA ligase	-
NSQ77_RS00455 (NSQ77_00455)	-	90601..91668 (-)	1068	WP_339228235.1	AI-2E family transporter	-
NSQ77_RS00460 (NSQ77_00460)	-	91723..91911 (-)	189	WP_339228236.1	hypothetical protein	-
NSQ77_RS00465 (NSQ77_00465)	recD2	91979..94297 (-)	2319	WP_339228237.1	ATP-dependent RecD-like DNA helicase	Machinery gene
NSQ77_RS00470 (NSQ77_00470)	-	94334..94999 (-)	666	WP_339228239.1	tetratricopeptide repeat protein	-
NSQ77_RS00475 (NSQ77_00475)	mnmA	95019..96131 (-)	1113	WP_339228240.1	tRNA 2-thiouridine(34) synthase MnmA	-
NSQ77_RS00480 (NSQ77_00480)	-	96344..97486 (-)	1143	WP_339228241.1	cysteine desulfurase family protein	-
NSQ77_RS00485 (NSQ77_00485)	-	97526..97945 (-)	420	WP_339228242.1	Rrf2 family transcriptional regulator	-

Sequence

Protein

• Length: 772 a.a.
• Molecular weight: 87500.69 Da
• Isoelectric Point: 4.8115

>NTDB_id=963237 NSQ77_RS00465 WP_339228237.1 91979..94297(-) (recD2) [Oceanobacillus sp. FSL K6-2867]
MEQDQQTVNEQGYIKGEILYTIFHNEAEHFSIIKVRVQDTNEDFKEKEIVAKGYFSNLQEQTPYFFYGTFERHARFGLQY
KVASYKTVVPNSKDGLISYLSSDLFYGVGKKTAERIVEHLGETAITQILNDGSILQGVPGLKRETAERLAVSLQENQGFE
HVAVYLAKYGIGLKIAQRIYQEYKDEAIAVLEEDPYQYVFAIEGFGFRTADDIARQNGLSMTHPNRIGAGCIYMLQKSVQ
EGHVYIPIEMCIDQVGELLSIHPEEAGIITEQMEELNKEKKVIMKDTKVYLPSLYYAEDGFAANLKRIMEKPIKVETPLA
EMMKITGDIEESEVMSYGKEQFSAINQSLHSKVMILTGGPGTGKTTVIKGILKAYSVIHDVSLNLKDYDDAADFPFVLTA
PTGRAAKRLNESTGLPALTIHRLLGWNGSNGFSKDEQEQLSGKILIVDEFSMVDIWLANSLFKAIPDEMQVLLVGDEDQL
PSVGPGQVLTDLLNSNLLPLVRLNEVYRQKEGSKIIQLAHEIKNDQLADQSLQNDKDFSFIACNEQQVLQVVTSIFKKAM
DKGLDAMEIQVLAPMYRSQAGITMINEQLQQLINPKTKTKREVKYHDVVYRVGDKVIQLVNQPEDGVYNGDIGEVVAIFR
EEENVDNVEQVVISFDEKEVVYERNNYNNFTHAYCISIHKSQGSEFPIVILPVVSTYFRMLRKNLLYTAITRSKESLIIC
GEKQAFLKGIQTMDTNKRYTSLREQLSDRMKDIKVEKSEEADEEEISPYDFM

Nucleotide

• Length: 2319 bp

>NTDB_id=963237 NSQ77_RS00465 WP_339228237.1 91979..94297(-) (recD2) [Oceanobacillus sp. FSL K6-2867]
ATGGAACAGGATCAACAAACAGTGAATGAACAAGGGTATATTAAAGGCGAAATTTTATATACCATTTTTCATAATGAAGC
AGAGCATTTTTCTATCATTAAGGTCCGGGTTCAGGATACAAATGAAGATTTCAAAGAAAAAGAGATTGTTGCTAAAGGTT
ATTTTTCCAACCTCCAAGAGCAAACCCCCTATTTCTTTTATGGTACGTTTGAAAGACATGCCAGATTTGGATTGCAGTAT
AAGGTTGCTTCGTATAAAACAGTTGTACCAAATTCAAAGGATGGTTTAATATCTTACTTATCAAGTGATCTTTTTTATGG
TGTTGGAAAAAAGACTGCTGAACGCATCGTTGAACATCTAGGCGAAACGGCTATCACACAGATTTTAAATGACGGAAGTA
TTTTACAAGGTGTGCCAGGATTAAAGAGAGAAACAGCTGAACGTTTAGCAGTTAGTTTGCAGGAAAACCAAGGATTTGAA
CACGTAGCAGTTTATTTAGCTAAATACGGTATTGGTTTAAAAATAGCGCAGCGTATCTATCAAGAATATAAGGATGAAGC
TATAGCAGTTTTAGAAGAAGATCCATATCAGTATGTCTTTGCAATTGAAGGATTTGGTTTTCGAACAGCAGACGACATTG
CTAGACAAAATGGGTTATCGATGACACACCCAAATCGAATTGGAGCTGGGTGTATTTATATGCTGCAAAAAAGTGTCCAA
GAAGGACATGTATATATTCCCATTGAAATGTGTATCGACCAGGTTGGGGAGCTTCTTAGTATCCATCCCGAAGAAGCTGG
CATCATAACCGAACAAATGGAAGAATTGAATAAAGAGAAGAAAGTTATCATGAAAGATACAAAGGTATACTTGCCTTCGC
TTTATTATGCTGAGGATGGATTTGCAGCGAATTTGAAACGGATTATGGAAAAGCCTATTAAAGTTGAAACGCCGCTAGCA
GAAATGATGAAAATTACGGGTGATATTGAAGAATCGGAAGTAATGAGCTATGGAAAAGAACAATTTTCGGCAATTAATCA
ATCGCTGCATTCGAAAGTAATGATTTTAACGGGTGGTCCCGGAACCGGAAAAACAACAGTGATTAAAGGTATTTTAAAAG
CTTATTCAGTAATTCATGATGTTTCCCTTAATTTGAAAGATTATGATGATGCAGCTGATTTTCCATTTGTTTTAACGGCA
CCAACAGGAAGAGCTGCCAAACGTTTGAATGAGTCGACTGGTCTTCCAGCACTGACCATTCACAGACTCCTTGGTTGGAA
TGGAAGCAATGGATTCAGCAAGGATGAGCAAGAACAGCTATCCGGAAAAATTCTTATTGTAGATGAGTTTTCTATGGTTG
ATATTTGGCTTGCAAATAGTTTATTTAAGGCAATTCCTGATGAAATGCAAGTATTGCTAGTTGGGGATGAAGATCAGCTG
CCATCCGTTGGGCCTGGTCAAGTATTAACAGATTTATTAAATAGTAATTTACTCCCGCTTGTTCGCCTTAATGAAGTATA
TCGCCAAAAAGAAGGTTCAAAAATCATTCAGCTTGCACATGAGATTAAAAATGATCAGCTGGCAGATCAGTCATTACAAA
ATGATAAAGATTTTAGTTTTATTGCTTGTAATGAACAGCAAGTGCTCCAAGTAGTAACATCAATTTTTAAAAAGGCGATG
GATAAAGGACTTGATGCCATGGAAATTCAAGTATTAGCGCCCATGTACCGAAGCCAGGCAGGCATCACAATGATTAATGA
ACAGCTTCAGCAATTAATTAATCCAAAGACGAAAACAAAACGGGAAGTTAAGTACCATGATGTTGTTTACCGTGTAGGGG
ATAAAGTGATTCAGCTTGTCAATCAACCAGAGGATGGCGTTTATAATGGCGATATTGGAGAAGTTGTTGCTATTTTTCGA
GAAGAAGAGAATGTAGATAACGTGGAGCAGGTTGTGATTAGTTTCGATGAGAAAGAAGTTGTCTATGAACGAAACAATTA
TAACAATTTCACTCATGCTTATTGCATTTCGATTCATAAGTCACAAGGCAGCGAATTTCCGATTGTTATCCTTCCTGTTG
TATCGACCTATTTTCGTATGCTGCGAAAAAATTTACTGTACACAGCAATTACAAGAAGCAAAGAGTCTTTGATAATTTGT
GGCGAAAAACAAGCATTTTTAAAAGGTATTCAGACAATGGATACGAATAAGCGCTATACGTCACTGAGAGAACAATTAAG
TGATAGAATGAAAGATATCAAAGTGGAAAAATCGGAAGAAGCAGATGAAGAAGAAATCTCACCATATGATTTCATGTGA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (337-544)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (672-720)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (585-655)

• Helix-hairpin-helix containing domain (HHH_RecD2) (155-245)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	47.462	100	0.484