Detailed information NTG0963065

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: WMC18_RS13860
• Genome accession: NZ_CP150130
• Coordinates: 2756867..2759245 (-)
• Length: 792 a.a.
• NCBI ID: WP_025853055.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain SEC-482
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2751867..2764245

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WMC18_RS13825 (WMC18_13805)	-	2752939..2753667 (+)	729	WP_003152746.1	amino acid ABC transporter ATP-binding protein	-
WMC18_RS13830 (WMC18_13810)	-	2753688..2754515 (+)	828	WP_003152745.1	transporter substrate-binding domain-containing protein	-
WMC18_RS13835 (WMC18_13815)	-	2754572..2755222 (+)	651	WP_003152744.1	amino acid ABC transporter permease	-
WMC18_RS13840 (WMC18_13820)	-	2755241..2755897 (+)	657	WP_014305490.1	amino acid ABC transporter permease	-
WMC18_RS13845 (WMC18_13825)	-	2755933..2756064 (-)	132	WP_003152741.1	YrzQ family protein	-
WMC18_RS13850 (WMC18_13830)	-	2756086..2756277 (-)	192	WP_003152738.1	hypothetical protein	-
WMC18_RS13855 (WMC18_13835)	-	2756290..2756748 (-)	459	WP_003152735.1	PRC-barrel domain-containing protein	-
WMC18_RS13860 (WMC18_13840)	recD2	2756867..2759245 (-)	2379	WP_025853055.1	ATP-dependent RecD-like DNA helicase	Machinery gene
WMC18_RS13865 (WMC18_13845)	-	2759264..2759884 (-)	621	WP_088005508.1	lipopolysaccharide assembly protein LapB	-
WMC18_RS13870 (WMC18_13850)	mnmA	2759972..2761087 (-)	1116	WP_032856904.1	tRNA 2-thiouridine(34) synthase MnmA	-
WMC18_RS13875 (WMC18_13855)	-	2761124..2762263 (-)	1140	WP_003152731.1	cysteine desulfurase family protein	-
WMC18_RS13880 (WMC18_13860)	cymR	2762282..2762698 (-)	417	WP_003152730.1	cysteine metabolism transcriptional regulator CymR	-
WMC18_RS13885 (WMC18_13865)	-	2762893..2764161 (+)	1269	WP_003152729.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 792 a.a.
• Molecular weight: 88350.01 Da
• Isoelectric Point: 4.9490

>NTDB_id=963065 WMC18_RS13860 WP_025853055.1 2756867..2759245(-) (recD2) [Bacillus velezensis strain SEC-482]
MDQLNIEEQPYVKGVIHTVIYHNDTNLYTVLKVKVAETSEAIEDKVVSVTGYFPLLQEDETYTFYGKTATHPKFGLQFQA
EHFKKEIPTTKEGIIHYLSSDLFEGIGKKTAEEIVKKLGDGALNKILSDASVLYDVPKMSKKKADKLAGELQRHQGLEQI
MISLNQYGFGPQLSMKIYQAYETETLEKIQENPYQLVKDVEGIGFVKADELGGKMGLSGNHPERIKAAILYTIESTCLSE
GHTYIETKQLIINTQTLLNQSAEGGRVTEMDAADGIIALGESKDIVIEGERCYFPSLFYAEQNVAKRVLDIAAQTEYADQ
FPESEFLLALGELEERMNVQYAPSQKDAIQKALSSPMLLLTGGPGTGKTTVIKGIVELYSELHGVSLDPGDYKKDEAFPV
LLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTYNEDQPIEGKLIIIDEASMLDIWLASHLFKALPKHIQLIVVGD
EDQLPSVGPGQVLRDLLASEVLPTVRLTDIYRQAEGSSIVELAHDMKKGLLPKGLTAPTKDRSFIRCNSSQIKEVVDQVV
SNALKKGYTSRDIQVLAPMYRGKAGINELNMLLQDIMNPPKEKRRELKFGDVVYRTGDKILQLVNQPENNVFNGDIGEIV
SIFYAKENTEKEDMVVVSFDGNEITFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAITRAKKF
LILCGEEEALEWGVKNNDATVRQTSLKNRLTEQTEEMDAELAALQKELPFSVYDANIGMEGITPFDFMEEKA

Nucleotide

• Length: 2379 bp

>NTDB_id=963065 WMC18_RS13860 WP_025853055.1 2756867..2759245(-) (recD2) [Bacillus velezensis strain SEC-482]
GTGGATCAGCTGAACATCGAAGAACAGCCGTATGTAAAAGGCGTCATTCATACGGTCATTTATCATAATGACACCAACCT
GTATACAGTGCTGAAAGTCAAGGTTGCAGAAACGTCTGAGGCGATCGAAGACAAGGTCGTATCCGTAACGGGCTACTTCC
CTCTGCTGCAAGAAGATGAGACCTACACATTTTACGGAAAAACTGCCACGCATCCTAAGTTCGGCCTGCAATTTCAGGCT
GAACACTTTAAAAAAGAAATTCCGACCACAAAAGAAGGAATCATTCACTATTTATCAAGTGATCTGTTTGAAGGAATCGG
AAAAAAAACGGCGGAAGAAATCGTCAAAAAGCTTGGAGACGGCGCGCTCAATAAAATTCTGTCGGATGCGTCGGTGCTTT
ACGATGTGCCGAAAATGTCGAAAAAGAAAGCGGATAAGCTTGCCGGAGAGCTGCAGCGGCATCAGGGTCTTGAGCAGATT
ATGATCTCTCTGAACCAATACGGTTTCGGGCCCCAGCTATCCATGAAAATATATCAGGCCTACGAAACGGAAACCTTGGA
GAAAATTCAGGAAAATCCTTATCAGCTTGTAAAAGACGTTGAGGGCATCGGCTTTGTGAAAGCTGACGAGCTGGGCGGAA
AAATGGGTCTGTCAGGAAACCACCCGGAGCGGATCAAAGCGGCTATCTTATATACGATTGAATCGACATGTCTTTCAGAG
GGCCACACGTACATAGAAACAAAGCAGCTGATTATCAATACGCAAACGCTTCTGAATCAGTCAGCTGAAGGCGGCCGCGT
CACGGAAATGGATGCGGCTGACGGCATCATCGCCCTCGGGGAGAGTAAGGATATCGTCATCGAAGGAGAGCGCTGCTATT
TTCCGTCCTTGTTTTACGCGGAACAAAACGTCGCAAAACGCGTGCTCGACATTGCCGCTCAGACGGAGTATGCCGATCAA
TTTCCTGAATCGGAATTTCTGCTTGCACTCGGTGAACTGGAAGAACGGATGAATGTTCAATACGCACCAAGCCAAAAGGA
TGCCATTCAAAAAGCGCTGTCTTCACCGATGCTTTTACTGACCGGAGGACCTGGAACGGGGAAAACGACCGTTATTAAAG
GAATCGTGGAATTATACAGTGAACTGCACGGCGTATCCCTTGACCCCGGTGATTATAAAAAAGACGAGGCGTTTCCGGTG
CTGCTTGCCGCGCCGACCGGAAGAGCCGCAAAACGGATGAGCGAATCTACGGGTCTGCCGGCTGTTACGATTCACAGGCT
GCTCGGCTGGAATGGCGCTGAAGGCTTTACCTACAACGAAGATCAGCCGATTGAAGGGAAACTGATCATTATAGACGAAG
CGAGTATGCTTGATATCTGGCTCGCCAGCCATTTGTTTAAGGCGCTTCCTAAGCACATTCAGCTCATTGTTGTCGGTGAT
GAAGACCAGCTTCCTTCAGTAGGACCGGGGCAGGTGCTCAGAGATCTTTTGGCTTCTGAAGTGCTGCCGACCGTGCGCCT
GACAGATATTTACCGTCAGGCTGAAGGATCATCCATTGTGGAACTTGCCCATGATATGAAAAAAGGGCTGCTTCCAAAGG
GGCTGACCGCGCCGACAAAGGACCGCTCATTTATCCGCTGTAATTCTTCACAGATTAAAGAAGTCGTGGATCAGGTCGTC
TCGAACGCGTTAAAAAAGGGGTATACCTCCAGAGATATTCAAGTGCTTGCCCCGATGTACAGGGGAAAAGCGGGAATTAA
CGAGCTGAACATGCTTCTTCAGGACATCATGAATCCGCCTAAAGAAAAAAGGCGGGAGCTGAAATTCGGAGATGTCGTCT
ACAGGACGGGCGATAAAATATTGCAGCTTGTCAACCAGCCGGAAAACAATGTGTTTAACGGCGATATCGGCGAAATCGTG
TCCATTTTTTATGCCAAAGAAAATACGGAAAAAGAAGACATGGTCGTCGTCTCGTTTGACGGCAACGAAATCACCTTTAC
GAAAAAGGATTTCAGCCAGTTTACCCACGCTTACTGCTGTTCCATTCATAAGTCGCAGGGGAGCGAATTCCCGATTGTCG
TCCTGCCTGTCGTCAAAGGCTACTATCGAATGCTCAGGAGAAATCTGCTTTATACCGCCATTACAAGAGCGAAAAAATTT
CTGATTCTTTGCGGAGAAGAAGAAGCGCTTGAATGGGGCGTCAAAAACAATGATGCCACCGTCAGACAGACGTCGCTTAA
AAACAGGCTCACAGAGCAGACTGAAGAGATGGATGCAGAACTGGCCGCCCTGCAAAAAGAGCTGCCGTTCAGTGTATATG
ATGCGAACATCGGAATGGAAGGCATCACGCCTTTTGACTTTATGGAAGAAAAAGCGTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (589-659)

• AAA domain (AAA_30) (341-548)

• Helix-hairpin-helix containing domain (HHH_RecD2) (154-244)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (676-724)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	88.875	99.874	0.888