Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   AABA19_RS06540 Genome accession   NZ_AP028609
Coordinates   1292621..1294372 (-) Length   583 a.a.
NCBI ID   WP_000828844.1    Uniprot ID   A0A0H2ZNQ2
Organism   Streptococcus pneumoniae strain Sep4     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1287621..1299372
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AABA19_RS06495 (TKY121806_12810) - 1287670..1288257 (-) 588 WP_000821280.1 CPBP family intramembrane glutamic endopeptidase -
  AABA19_RS06500 - 1288260..1288493 (-) 234 Protein_1286 transcriptional regulator -
  AABA19_RS06505 (TKY121806_12830) - 1288506..1288886 (-) 381 WP_000566531.1 arsenate reductase family protein -
  AABA19_RS06510 (TKY121806_12840) - 1288879..1289202 (-) 324 WP_000143349.1 hypothetical protein -
  AABA19_RS06515 (TKY121806_12850) - 1289213..1289464 (-) 252 Protein_1289 replication initiator protein A -
  AABA19_RS06520 (TKY121806_12860) - 1289464..1289634 (-) 171 WP_001168348.1 hypothetical protein -
  AABA19_RS06525 (TKY121806_12870) rplL 1289821..1290189 (-) 369 WP_001196960.1 50S ribosomal protein L7/L12 -
  AABA19_RS06530 (TKY121806_12880) rplJ 1290265..1290765 (-) 501 WP_001287278.1 50S ribosomal protein L10 -
  AABA19_RS06535 (TKY121806_12890) - 1291015..1292274 (-) 1260 WP_000862488.1 TRZ/ATZ family protein -
  AABA19_RS06540 (TKY121806_12900) rcrQ 1292621..1294372 (-) 1752 WP_000828844.1 ABC transporter ATP-binding protein Regulator
  AABA19_RS06545 (TKY121806_12910) - 1294374..1296098 (-) 1725 WP_000681687.1 ABC transporter ATP-binding protein -
  AABA19_RS06550 (TKY121806_12920) msrB 1296156..1297094 (-) 939 WP_000818207.1 peptide-methionine (R)-S-oxide reductase MsrB -
  AABA19_RS06555 (TKY121806_12930) - 1297161..1297313 (-) 153 WP_001852357.1 hypothetical protein -
  AABA19_RS06560 (TKY121806_12940) thrB 1297389..1298258 (-) 870 WP_000692438.1 homoserine kinase -

Sequence

Protein


Download         Length: 583 a.a.        Molecular weight: 64876.41 Da        Isoelectric Point: 7.3119

>NTDB_id=95969 AABA19_RS06540 WP_000828844.1 1292621..1294372(-) (rcrQ) [Streptococcus pneumoniae strain Sep4]
MKRQTVNQTLKRLAVDLASHPFLLFLAFLGTIAQVGLSIYLPILIGQVIDQVLVAGSSPVFWQIFLQMLLVVIGNTLVQW
ANPLLYNRLIFSYTRDLRERIIHKLHRLPIAFVDRQGSGEMVSRVTTDIEQLAAGLTMIFNQFFIGVLMILVSILAMLQI
HLLMTLLVLLLTPLSMVISRFIAKKSYHLFQKQTETRGIQTQLIEESLSQQTIIQSFNAQTEFIQRLREAHDNYSGYSQS
AIFYSSTVNPSTRFVNALIYALLAGVGAYRIMMGSALTVGRLVTFLNYVQQYTKPFNDISSVLAELQSALACVERIYGVL
DSPEVAETGKEVLTTSDQVKGAISFKHVSFGYHPEKILIKDLSIDIPAGSKVAIVGPTGAGKSTLINLLMRFYPISSGDI
LLDGQSIYDYTRVSLRQQFGMVLQETWLTQGTIHDNIAFGNPEASREQVIAAAKAANADFFIQQLPQGYDTKLENAGESL
SVGQAQLLTIARVFLAIPKILILDEATSSIDTRTEVLVQDAFAKLMKGRTSFIIAHRLSTIQDADLILVLVDGDIVEYGN
HQELMDRKGKYYQMQKAAAFSSE

Nucleotide


Download         Length: 1752 bp        

>NTDB_id=95969 AABA19_RS06540 WP_000828844.1 1292621..1294372(-) (rcrQ) [Streptococcus pneumoniae strain Sep4]
ATGAAACGACAAACTGTAAACCAGACGCTCAAACGTTTAGCCGTAGATTTAGCAAGCCATCCTTTCCTCCTTTTCCTAGC
CTTTCTAGGAACTATTGCTCAAGTTGGCTTATCAATTTACCTACCTATTCTGATTGGGCAGGTCATTGACCAAGTCCTAG
TGGCTGGTTCATCACCAGTTTTTTGGCAGATTTTTCTCCAGATGCTCTTGGTGGTAATAGGAAATACTCTGGTACAATGG
GCCAATCCTCTCCTCTATAATCGTCTAATCTTCTCTTATACCAGAGATTTACGGGAGCGAATCATCCATAAGCTCCATCG
TTTACCGATTGCCTTTGTAGATAGGCAAGGTAGTGGAGAGATGGTTAGTCGTGTAACCACGGACATCGAACAGTTGGCAG
CTGGCTTGACCATGATTTTTAACCAATTTTTCATTGGTGTTTTGATGATTTTGGTCAGTATTCTAGCCATGCTCCAAATT
CATCTCCTCATGACTCTCTTAGTCTTGCTGTTGACGCCACTGTCCATGGTGATTTCACGCTTTATTGCCAAGAAATCCTA
TCATCTCTTCCAGAAGCAAACAGAGACGAGGGGAATTCAGACTCAGTTGATTGAAGAATCGCTTAGTCAGCAGACTATAA
TCCAGTCCTTCAATGCTCAAACAGAATTTATCCAAAGATTGCGTGAGGCTCATGACAACTACTCAGGCTATTCTCAGTCA
GCCATCTTTTATTCTTCAACGGTCAATCCTTCGACTCGCTTTGTAAATGCACTCATTTATGCCCTTTTAGCTGGAGTAGG
AGCTTATCGTATCATGATGGGTTCAGCCTTGACCGTCGGTCGTTTAGTGACTTTTTTGAACTATGTTCAGCAATACACCA
AGCCCTTTAACGATATTTCTTCAGTGCTAGCTGAGTTGCAAAGTGCTCTGGCTTGCGTAGAGCGTATCTATGGAGTCTTA
GATAGCCCTGAAGTGGCTGAAACAGGTAAGGAAGTCTTGACGACCAGTGACCAAGTTAAGGGAGCTATTTCCTTTAAACA
TGTCTCTTTTGGCTACCATCCTGAAAAAATTTTGATTAAGGACTTGTCTATCGATATTCCAGCTGGTAGTAAGGTAGCCA
TCGTTGGTCCGACAGGTGCTGGAAAATCAACTCTTATCAATCTCCTTATGCGTTTTTATCCCATTAGCTCGGGAGATATC
TTGCTGGATGGGCAATCCATTTATGATTATACACGAGTATCATTGAGACAGCAGTTTGGTATGGTGCTTCAAGAAACCTG
GCTCACACAAGGGACCATTCATGATAATATTGCCTTTGGCAATCCTGAAGCCAGTCGAGAGCAAGTAATTGCTGCTGCCA
AAGCAGCTAATGCAGACTTTTTCATCCAACAGTTGCCACAGGGATACGATACCAAGTTGGAAAATGCTGGAGAATCTCTC
TCTGTCGGCCAAGCTCAGCTCTTGACCATAGCCCGAGTCTTTCTGGCTATTCCAAAGATTCTTATCTTAGACGAGGCAAC
TTCTTCCATTGATACACGGACAGAAGTGCTGGTACAGGATGCCTTTGCAAAACTCATGAAGGGCCGCACAAGTTTCATCA
TTGCTCACCGTTTGTCAACCATTCAGGATGCGGATTTAATTCTTGTCTTAGTAGATGGTGATATTGTTGAATATGGTAAC
CATCAAGAACTCATGGATAGAAAGGGTAAGTATTACCAAATGCAAAAAGCTGCGGCTTTTAGTTCTGAATAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(24-295)

ABC transporter (ABC_tran)

(360-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZNQ2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

37.544

97.77

0.367