Detailed information NTG0095644

Bioinformatically predicted

Overview

• Name: comYH
• Type: Machinery gene
• Locus tag: LGMS210922A_RS08735
• Genome accession: NZ_AP026069
• Coordinates: 1775743..1776678 (-)
• Length: 311 a.a.
• NCBI ID: WP_003133316.1
• Uniprot ID: A0A1I4GTA7
• Organism: Lactococcus garvieae strain MS210922A
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1770743..1781678

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LGMS210922A_RS08710 (LGMS210922A_17250)	-	1770791..1771651 (-)	861	WP_003133325.1	CvfB family protein	-
LGMS210922A_RS08715 (LGMS210922A_17260)	frr	1771759..1772316 (-)	558	WP_003133324.1	ribosome recycling factor	-
LGMS210922A_RS08720 (LGMS210922A_17270)	pyrH	1772346..1773062 (-)	717	WP_003133322.1	UMP kinase	-
LGMS210922A_RS08725 (LGMS210922A_17280)	-	1773153..1774346 (-)	1194	WP_003133320.1	acetate kinase	-
LGMS210922A_RS08730 (LGMS210922A_17290)	-	1774465..1775658 (-)	1194	WP_265149676.1	acetate kinase	-
LGMS210922A_RS08735 (LGMS210922A_17300)	comYH	1775743..1776678 (-)	936	WP_003133316.1	class I SAM-dependent methyltransferase	Machinery gene
LGMS210922A_RS08740 (LGMS210922A_17310)	-	1776724..1776954 (-)	231	WP_003133314.1	DUF3165 family protein	-
LGMS210922A_RS08745 (LGMS210922A_17320)	typA	1777029..1778870 (-)	1842	WP_003133313.1	translational GTPase TypA	-
LGMS210922A_RS08750 (LGMS210922A_17330)	-	1779191..1779403 (+)	213	WP_003133311.1	YqgQ family protein	-
LGMS210922A_RS08755 (LGMS210922A_17340)	-	1779396..1780361 (+)	966	WP_003133309.1	ROK family glucokinase	-
LGMS210922A_RS08760 (LGMS210922A_17350)	-	1780381..1780761 (+)	381	WP_003133308.1	rhodanese-like domain-containing protein	-
LGMS210922A_RS08765 (LGMS210922A_17360)	-	1780801..1781247 (-)	447	WP_003133306.1	Dps family protein	-

Sequence

Protein

• Length: 311 a.a.
• Molecular weight: 35124.17 Da
• Isoelectric Point: 4.6693

>NTDB_id=95644 LGMS210922A_RS08735 WP_003133316.1 1775743..1776678(-) (comYH) [Lactococcus garvieae strain MS210922A]
MDIEKIEKAFGLVLENIMAIQAELLTDFYDAFVEQNAAYLGALEFASLTKENNDKVRSMNLTKSEWQKLFQFVLLQGSRV
APMQANHNLTPDSIGFIFNFIIEELHKERKIRVLEFGSGTGNLAETLLVHMQKEVDYVGFEVDDLLLDLSASMSEVMGTE
ASFLQIDAVKPQPLESVDVVMSDLPVGYYPDDDTARHFQVHDKSEHTYVHHLMIEQSFKYLKESGFALFLAPDNLLTSAQ
SEFLKAWIKEHAHVAAVITLPSSLFKGAGKSIYLLSKNQTNTPTFVYPLADLADRSILQEFMSEFVKNVKI

Nucleotide

• Length: 936 bp

>NTDB_id=95644 LGMS210922A_RS08735 WP_003133316.1 1775743..1776678(-) (comYH) [Lactococcus garvieae strain MS210922A]
ATGGATATAGAGAAAATCGAAAAAGCCTTTGGATTGGTTCTTGAAAATATTATGGCAATTCAAGCGGAGCTCTTGACGGA
TTTTTATGATGCTTTTGTGGAACAAAATGCAGCTTACTTAGGCGCTTTAGAGTTTGCATCTCTGACGAAGGAAAATAATG
ATAAGGTTCGTTCAATGAACCTCACGAAAAGTGAGTGGCAAAAGCTGTTTCAGTTTGTCTTGCTTCAAGGGTCACGTGTC
GCACCGATGCAAGCAAATCATAATTTAACACCAGATTCTATTGGGTTTATCTTTAATTTCATCATTGAAGAGTTGCACAA
AGAAAGAAAGATTCGTGTACTAGAATTTGGCTCAGGAACAGGGAATTTAGCGGAAACGCTCTTGGTTCATATGCAAAAAG
AAGTAGACTATGTTGGTTTTGAAGTAGATGACCTCTTGTTGGATTTGTCTGCTTCAATGTCAGAAGTCATGGGAACAGAA
GCAAGTTTTCTCCAAATTGACGCCGTGAAACCACAGCCCTTGGAGTCTGTAGATGTTGTGATGAGTGATCTCCCGGTTGG
TTATTATCCAGACGATGACACTGCTCGCCATTTTCAAGTGCATGACAAATCAGAACATACCTATGTGCACCACTTAATGA
TTGAGCAATCCTTTAAGTATCTGAAGGAGAGTGGTTTTGCGCTCTTCTTAGCTCCAGATAATCTTTTGACAAGTGCACAG
TCAGAATTTTTGAAGGCTTGGATTAAAGAACATGCACATGTTGCTGCAGTCATTACATTGCCTTCGTCACTCTTTAAAGG
TGCAGGAAAATCGATTTATTTATTAAGTAAAAACCAAACAAATACACCAACTTTTGTTTACCCCTTGGCTGATTTAGCAG
ACCGTTCTATTTTGCAAGAATTTATGTCTGAGTTTGTGAAAAATGTCAAGATTTGA

Domains

Predicted by InterproScan.

• N-6 DNA Methylase (N6_Mtase) (132-286)

3D structure

• AlphaFold DB: A0A1I4GTA7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYH	Streptococcus mutans UA140	49.677	99.678	0.495
comYH	Streptococcus mutans UA159	49.355	99.678	0.492