Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   WG927_RS07615 Genome accession   NZ_CP148896
Coordinates   1440462..1440926 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain XS142     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1435462..1445926
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WG927_RS07595 (WG927_07580) - 1435943..1437763 (+) 1821 WP_021493759.1 PAS domain-containing protein -
  WG927_RS07600 (WG927_07585) - 1437744..1438957 (-) 1214 Protein_1438 aminotransferase A -
  WG927_RS07605 (WG927_07590) - 1439158..1439319 (-) 162 WP_099721949.1 hypothetical protein -
  WG927_RS07610 (WG927_07595) cheV 1439508..1440419 (+) 912 WP_029973673.1 chemotaxis protein CheV -
  WG927_RS07615 (WG927_07600) kre 1440462..1440926 (-) 465 WP_003154622.1 YkyB family protein Regulator
  WG927_RS07620 (WG927_07605) - 1441049..1442341 (-) 1293 WP_029973674.1 MFS transporter -
  WG927_RS07625 (WG927_07610) - 1442417..1442911 (-) 495 WP_089072484.1 L,D-transpeptidase family protein -
  WG927_RS07630 (WG927_07615) - 1442986..1443849 (-) 864 WP_021493757.1 metallophosphoesterase -
  WG927_RS07635 (WG927_07620) fadH 1443993..1444757 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  WG927_RS07640 (WG927_07625) - 1444871..1445419 (+) 549 WP_029973676.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=956017 WG927_RS07615 WP_003154622.1 1440462..1440926(-) (kre) [Bacillus velezensis strain XS142]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=956017 WG927_RS07615 WP_003154622.1 1440462..1440926(-) (kre) [Bacillus velezensis strain XS142]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929