Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | QMM33_RS08790 | Genome accession | NZ_AP025940 |
| Coordinates | 1742204..1742599 (-) | Length | 131 a.a. |
| NCBI ID | WP_000282467.1 | Uniprot ID | A0A098Z0L0 |
| Organism | Streptococcus pneumoniae strain PZ900700204 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1737204..1747599
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QMM33_RS08765 (PC0204_17070) | - | 1737401..1737934 (+) | 534 | WP_000775321.1 | DUF402 domain-containing protein | - |
| QMM33_RS08770 (PC0204_17080) | - | 1738289..1738495 (-) | 207 | WP_000775827.1 | transcriptional regulator | - |
| QMM33_RS08775 (PC0204_17090) | - | 1738655..1739913 (+) | 1259 | WP_281055090.1 | ISL3 family transposase | - |
| QMM33_RS08780 (PC0204_17110) | groL | 1740012..1741634 (-) | 1623 | WP_000031573.1 | chaperonin GroEL | - |
| QMM33_RS08785 (PC0204_17120) | groES | 1741650..1741934 (-) | 285 | WP_000917339.1 | co-chaperone GroES | - |
| QMM33_RS08790 (PC0204_17130) | ssbB/cilA | 1742204..1742599 (-) | 396 | WP_000282467.1 | single-stranded DNA-binding protein | Machinery gene |
| QMM33_RS08795 (PC0204_17140) | - | 1742677..1743438 (-) | 762 | WP_001107745.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| QMM33_RS08800 (PC0204_17150) | ytpR | 1743471..1744097 (-) | 627 | WP_000578309.1 | YtpR family tRNA-binding protein | - |
| QMM33_RS08805 (PC0204_17160) | - | 1744113..1744430 (-) | 318 | WP_000615767.1 | thioredoxin family protein | - |
| QMM33_RS08810 (PC0204_17170) | - | 1744427..1744726 (-) | 300 | WP_001013974.1 | DUF4651 domain-containing protein | - |
| QMM33_RS08815 | - | 1744820..1744951 (+) | 132 | WP_050207302.1 | hypothetical protein | - |
| QMM33_RS08820 (PC0204_17180) | - | 1744976..1745173 (-) | 198 | Protein_1730 | N-acetylmuramoyl-L-alanine amidase family protein | - |
| QMM33_RS08825 (PC0204_17190) | - | 1745415..1746089 (-) | 675 | WP_000725750.1 | membrane protein | - |
| QMM33_RS08830 (PC0204_17200) | - | 1746095..1746541 (-) | 447 | WP_000776589.1 | LytTR family DNA-binding domain-containing protein | - |
| QMM33_RS08835 | - | 1746655..1747158 (-) | 504 | WP_000800942.1 | phosphatase PAP2 family protein | - |
| QMM33_RS08840 (PC0204_17210) | - | 1747155..1747517 (-) | 363 | WP_000078804.1 | DUF2200 family protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14925.89 Da Isoelectric Point: 5.9409
>NTDB_id=95529 QMM33_RS08790 WP_000282467.1 1742204..1742599(-) (ssbB/cilA) [Streptococcus pneumoniae strain PZ900700204]
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=95529 QMM33_RS08790 WP_000282467.1 1742204..1742599(-) (ssbB/cilA) [Streptococcus pneumoniae strain PZ900700204]
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGCCAAATGAACTACGTGACCGAAGTACTTGTAACAGGATTCCAACTCTTGGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTAGTCTTGGAAGAGGAAGAATTGCCATTTTAA
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGCCAAATGAACTACGTGACCGAAGTACTTGTAACAGGATTCCAACTCTTGGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTAGTCTTGGAAGAGGAAGAATTGCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus mitis SK321 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
98.473 |
100 |
0.985 |
| ssbA | Streptococcus mutans UA159 |
74.809 |
100 |
0.748 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
70.229 |
100 |
0.702 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.821 |
85.496 |
0.511 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.903 |
86.26 |
0.405 |