Detailed information NTG0953887

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ACGH52_RS07965
• Genome accession: NZ_CP172447
• Coordinates: 1777400..1778755 (-)
• Length: 451 a.a.
• NCBI ID: WP_210976482.1
• Uniprot ID: -
• Organism: Streptomyces sp. BBFR25
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1772400..1783755

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACGH52_RS07945 (ACGH52_07945)	-	1773269..1773631 (-)	363	WP_059299533.1	hypothetical protein	-
ACGH52_RS07950 (ACGH52_07950)	-	1773639..1774088 (-)	450	WP_076973493.1	DUF948 domain-containing protein	-
ACGH52_RS07955 (ACGH52_07955)	-	1774254..1776443 (+)	2190	WP_193777669.1	AAA family ATPase	-
ACGH52_RS07960 (ACGH52_07960)	rpsD	1776491..1777105 (-)	615	WP_003977321.1	30S ribosomal protein S4	-
ACGH52_RS07965 (ACGH52_07965)	rarA	1777400..1778755 (-)	1356	WP_210976482.1	replication-associated recombination protein A	Machinery gene
ACGH52_RS07970 (ACGH52_07970)	-	1778825..1779487 (-)	663	WP_059299536.1	vitamin K epoxide reductase family protein	-
ACGH52_RS07975 (ACGH52_07975)	hisS	1779684..1780946 (-)	1263	WP_399938350.1	histidine--tRNA ligase	-
ACGH52_RS07980 (ACGH52_07980)	-	1780958..1781674 (-)	717	WP_059299538.1	MBL fold metallo-hydrolase	-
ACGH52_RS07985 (ACGH52_07985)	-	1781858..1782685 (+)	828	WP_210976481.1	peptidylprolyl isomerase	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 48242.51 Da
• Isoelectric Point: 6.2012

>NTDB_id=953887 ACGH52_RS07965 WP_210976482.1 1777400..1778755(-) (rarA) [Streptomyces sp. BBFR25]
MEPDLFTAAAEERQEKDPTGSPLAVRMRPRTLDEVVGQQHLLKPGSPLRRLVGEGASGPAGPSSVILWGPPGTGKTTLAY
VVSKATNKRFVELSAITAGVKEVRAVIDGARRAVGGYGKETVLFLDEIHRFSKAQQDSLLPAVENRWVTLIAATTENPYF
SVISPLLSRSLLLTLESLTDDDVRGLLRRALSDERGLGDAVALPEDTEEHLLRIAGGDARRALTALEAAAGAALDKGETE
ISLTTLEETVDRAAVKYDRDGDQHYDVASALIKSIRGSDVDAALHYLARMIEAGEDPRFIARRLMISASEDIGLADPNAL
QIAVAAAQAVAMIGFPEAALTLSHATIALALAPKSNAATTAIGAALEDVRKGHAGPVPAHLRDSHYKGAGKLGHGQGYVY
PHDLPEGIAAQQYAPDELKERTYYTPTRHGAEARYADAVEWTRGHLGRKRS

Nucleotide

• Length: 1356 bp

>NTDB_id=953887 ACGH52_RS07965 WP_210976482.1 1777400..1778755(-) (rarA) [Streptomyces sp. BBFR25]
GTGGAGCCCGATCTGTTCACCGCCGCAGCCGAAGAACGCCAGGAGAAGGACCCGACCGGCAGCCCCCTCGCCGTCCGGAT
GCGCCCGCGCACCCTCGACGAGGTCGTCGGCCAGCAGCACCTGCTCAAGCCCGGTTCTCCCCTGCGCCGCCTGGTCGGCG
AGGGCGCGTCCGGCCCCGCGGGGCCCTCCTCGGTCATCCTCTGGGGCCCGCCGGGCACCGGCAAGACCACCCTGGCGTAC
GTCGTCTCCAAGGCCACCAACAAGCGCTTCGTGGAGCTGTCGGCGATCACCGCGGGCGTCAAGGAGGTCCGCGCGGTCAT
CGACGGCGCCCGCCGCGCGGTCGGCGGGTACGGCAAGGAGACCGTCCTCTTCCTCGACGAGATCCACCGCTTCAGCAAGG
CCCAGCAGGACTCGCTGCTCCCGGCCGTCGAGAACCGCTGGGTCACATTGATCGCCGCCACCACCGAGAACCCGTACTTC
TCGGTGATCTCCCCGCTGCTCTCCCGCTCCCTCCTGCTCACCCTCGAATCCCTCACCGACGACGACGTGCGGGGCCTGCT
CCGCCGCGCGCTGAGCGACGAGCGCGGCCTGGGGGACGCCGTCGCCCTCCCCGAGGACACCGAGGAGCACCTGCTGCGCA
TCGCCGGAGGCGACGCCCGGCGCGCGCTCACCGCGCTGGAGGCCGCCGCCGGGGCCGCGCTGGACAAGGGCGAGACGGAG
ATCTCCCTGACCACGCTGGAGGAGACGGTCGACCGCGCCGCGGTGAAGTACGACCGCGACGGCGACCAGCACTACGACGT
CGCCAGCGCCCTGATCAAGTCCATCCGCGGCTCCGACGTCGACGCCGCCCTGCACTACCTGGCCCGGATGATCGAGGCCG
GCGAGGACCCCCGCTTCATCGCCCGGCGTCTGATGATCTCCGCCAGCGAGGACATTGGCCTGGCCGATCCGAACGCGCTG
CAGATCGCCGTCGCCGCCGCCCAGGCCGTCGCCATGATCGGCTTCCCCGAGGCCGCCCTCACCCTCAGCCACGCCACCAT
CGCCCTGGCGCTGGCCCCCAAGTCCAACGCCGCCACCACCGCCATCGGCGCCGCCCTGGAGGACGTGCGCAAGGGCCACG
CCGGGCCGGTCCCCGCGCACCTGCGCGACAGCCACTACAAGGGCGCCGGCAAGCTGGGGCACGGGCAGGGGTACGTGTAC
CCGCACGACCTGCCCGAGGGCATCGCCGCCCAGCAGTACGCCCCGGACGAGCTGAAGGAGCGGACGTACTACACGCCGAC
CCGGCACGGCGCCGAGGCGCGGTACGCGGACGCGGTGGAGTGGACCCGCGGGCACCTCGGTCGCAAGCGGTCCTGA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (200-276)

• MgsA AAA+ ATPase C terminal (MgsA_C) (277-441)

• ATPase family associated with various cellular activities (AAA) (AAA) (65-169)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	44.111	96.009	0.424