Detailed information NTG0953613

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ACGH2B_RS24420
• Genome accession: NZ_CP172415
• Coordinates: 5977210..5978571 (+)
• Length: 453 a.a.
• NCBI ID: WP_399093808.1
• Uniprot ID: -
• Organism: Streptomyces sp. BBFR2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 5972210..5983571

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACGH2B_RS24400 (ACGH2B_24400)	-	5973031..5973852 (-)	822	WP_399093796.1	peptidylprolyl isomerase	-
ACGH2B_RS24405 (ACGH2B_24405)	-	5974073..5974786 (+)	714	WP_399093799.1	MBL fold metallo-hydrolase	-
ACGH2B_RS24410 (ACGH2B_24410)	hisS	5974798..5976060 (+)	1263	WP_399093802.1	histidine--tRNA ligase	-
ACGH2B_RS24415 (ACGH2B_24415)	-	5976477..5977118 (+)	642	WP_399093805.1	vitamin K epoxide reductase family protein	-
ACGH2B_RS24420 (ACGH2B_24420)	rarA	5977210..5978571 (+)	1362	WP_399093808.1	replication-associated recombination protein A	Machinery gene
ACGH2B_RS24425 (ACGH2B_24425)	-	5978986..5979741 (-)	756	WP_399097284.1	DUF2470 domain-containing protein	-
ACGH2B_RS24430 (ACGH2B_24430)	rpsD	5979924..5980535 (+)	612	WP_136744570.1	30S ribosomal protein S4	-
ACGH2B_RS24435 (ACGH2B_24435)	-	5980823..5981257 (+)	435	WP_399093811.1	DUF948 domain-containing protein	-
ACGH2B_RS24440 (ACGH2B_24440)	-	5981266..5981613 (+)	348	WP_399093814.1	DUF6167 family protein	-

Sequence

Protein

• Length: 453 a.a.
• Molecular weight: 48159.50 Da
• Isoelectric Point: 6.6463

>NTDB_id=953613 ACGH2B_RS24420 WP_399093808.1 5977210..5978571(+) (rarA) [Streptomyces sp. BBFR2]
MEPDLFTAAAEDRQEKDPAGSPLAVRMRPRTLDEVVGQQHLLKPGSPLRRLVGEGSGGPAGPSSVFLWGPPGIGKTTLAY
VVSQATNKRFVELSAITAGVKEVRAVIDGARRASGGFGKETVLFLDEIHRFSKAQQDSLLPAVENRWVTLIAATTENPYF
SVISPLLSRSLLLTLEPLTDDDLRGLLRRALTAERGLGGAVTLPEDTEAHLLRIAGGDARRALTALEAGAGSALAKGEAE
ITLRTLEESVDRAAVKYDRDGDQHYDVASALIKSIRGSDVDAALHYLARMIEAGEDPRFIARRLMISASEDIGLADPSAL
QTAVAAAQAVAMIGFPEARITLSQATIALALAPKSNAAYMAIDAALADVRAGQAGPVPPHLRDSHYKGAEKLGHGQGYQY
PHDLPGGIAAQQYAPDAVHGKRYYTPTRHGAEARYAEVADRVRARLHGGATES

Nucleotide

• Length: 1362 bp

>NTDB_id=953613 ACGH2B_RS24420 WP_399093808.1 5977210..5978571(+) (rarA) [Streptomyces sp. BBFR2]
GTGGAGCCCGACCTGTTCACCGCCGCCGCCGAAGACCGTCAGGAGAAGGACCCGGCCGGGTCCCCCCTCGCCGTACGGAT
GCGTCCGCGCACCCTCGACGAGGTCGTGGGCCAGCAGCATCTGCTCAAGCCCGGCTCGCCGCTGCGGCGGCTGGTGGGGG
AGGGCTCCGGGGGGCCCGCGGGGCCGTCCTCGGTGTTCCTCTGGGGGCCGCCCGGGATCGGCAAGACCACCCTCGCGTAC
GTCGTCAGCCAGGCGACCAACAAGCGGTTCGTGGAGCTGTCGGCGATCACCGCGGGCGTCAAGGAGGTGCGGGCGGTCAT
CGACGGCGCGCGCCGCGCCTCGGGCGGCTTCGGCAAGGAGACCGTCCTCTTCCTCGACGAGATCCACCGCTTCAGCAAGG
CCCAGCAGGACTCCCTGCTCCCCGCGGTGGAGAACCGCTGGGTCACCCTGATCGCCGCCACCACCGAGAACCCGTACTTC
TCGGTGATCTCCCCGCTGCTCTCCCGCTCGCTGCTGCTCACCCTGGAGCCGCTGACCGACGACGACCTGCGGGGGCTGCT
GCGCCGGGCGCTCACCGCGGAGCGCGGTCTGGGCGGTGCGGTGACGCTGCCCGAGGACACCGAGGCCCATCTGCTGCGGA
TCGCCGGCGGGGACGCCCGGCGCGCGCTGACGGCGCTGGAGGCGGGTGCGGGCTCGGCGCTGGCCAAGGGCGAGGCGGAG
ATCACCCTCCGGACCCTGGAGGAGTCCGTCGACCGCGCCGCGGTCAAGTACGACCGGGACGGCGATCAGCACTACGACGT
CGCCAGCGCGCTGATCAAGTCCATCCGGGGCTCCGACGTCGATGCCGCGCTGCACTATCTGGCGCGCATGATCGAGGCGG
GGGAGGACCCGCGGTTCATCGCCCGGCGGCTGATGATCTCGGCGAGTGAGGACATCGGGCTGGCCGATCCCTCCGCGCTG
CAGACGGCGGTGGCCGCGGCGCAGGCGGTCGCCATGATCGGCTTCCCCGAGGCCCGGATCACGCTGAGCCAGGCCACCAT
CGCGCTCGCCCTGGCCCCCAAGTCCAATGCCGCGTACATGGCGATAGACGCGGCGCTGGCCGACGTCCGCGCAGGTCAGG
CCGGTCCCGTCCCGCCGCATCTGCGCGACAGCCACTACAAGGGCGCCGAGAAGCTGGGCCACGGCCAGGGGTACCAGTAC
CCGCACGACCTGCCCGGCGGCATCGCGGCCCAGCAGTACGCTCCGGACGCGGTGCACGGCAAGCGCTACTACACCCCGAC
CCGGCACGGCGCCGAGGCCCGCTACGCCGAGGTGGCCGACCGGGTCCGGGCACGGCTGCACGGCGGCGCGACGGAGAGCT
GA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (277-441)

• AAA C-terminal domain (AAA_assoc_2) (200-276)

• ATPase family associated with various cellular activities (AAA) (AAA) (65-169)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	46.047	94.923	0.437