Detailed information NTG0953487

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: Q3A86_RS06385
• Genome accession: NZ_CP172414
• Coordinates: 1611461..1612816 (-)
• Length: 451 a.a.
• NCBI ID: WP_359927807.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBUA17
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1606461..1617816

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q3A86_RS06365 (Q3A86_06365)	-	1607342..1607698 (-)	357	WP_031035736.1	hypothetical protein	-
Q3A86_RS06370 (Q3A86_06370)	-	1607706..1608155 (-)	450	WP_107060560.1	DUF948 domain-containing protein	-
Q3A86_RS06375 (Q3A86_06375)	-	1608334..1610520 (+)	2187	WP_399137212.1	ATP-binding protein	-
Q3A86_RS06380 (Q3A86_06380)	rpsD	1610550..1611164 (-)	615	WP_031035730.1	30S ribosomal protein S4	-
Q3A86_RS06385 (Q3A86_06385)	rarA	1611461..1612816 (-)	1356	WP_359927807.1	replication-associated recombination protein A	Machinery gene
Q3A86_RS06390 (Q3A86_06390)	-	1612898..1613560 (-)	663	WP_399137215.1	vitamin K epoxide reductase family protein	-
Q3A86_RS06395 (Q3A86_06395)	hisS	1613752..1615014 (-)	1263	WP_224307088.1	histidine--tRNA ligase	-
Q3A86_RS06400 (Q3A86_06400)	-	1615028..1615735 (-)	708	WP_224307087.1	MBL fold metallo-hydrolase	-
Q3A86_RS06405 (Q3A86_06405)	-	1615920..1616771 (+)	852	WP_224307086.1	peptidylprolyl isomerase	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 48079.43 Da
• Isoelectric Point: 6.4508

>NTDB_id=953487 Q3A86_RS06385 WP_359927807.1 1611461..1612816(-) (rarA) [Streptomyces sp. NBUA17]
MEPDLFTAAAEERQEKDPTGSPLAVRMRPRTLDEVVGQQHLLKPGSPLRRLVGEGGSGPAGPSSVFLWGPPGTGKTTLAY
VVSKATNKRFVELSAITAGVKEVRAVIDGARRAVGGYGKETVLFLDEIHRFSKAQQDSLLPAVENRWVTLIAATTENPYF
SVISPLLSRSLLLTLEPLTDDDVRGLLRRALAAERGLGGAVALPEDTEEHLLRIAGGDARRALTALEAAAGAALDKGETE
IGLTTLEETVDRAAVKYDRDGDQHYDVASALIKSIRGSDVDAALHYLARMIEAGEDPRFIARRLMISASEDIGLADPNAL
PIAVAAAQAVAMIGFPEAALTLSHATIALALAPKSNAATTAIGAALDDVRKGHAGPVPAHLRDSHYKGAGKLGHGQGYVY
PHDLPEGIAAQQYAPDELKERTYYTPTRHGAEARYADAVEWTRGHLGRKRS

Nucleotide

• Length: 1356 bp

>NTDB_id=953487 Q3A86_RS06385 WP_359927807.1 1611461..1612816(-) (rarA) [Streptomyces sp. NBUA17]
GTGGAGCCCGACCTGTTCACCGCCGCAGCCGAAGAACGCCAGGAGAAGGACCCGACCGGCAGCCCCCTCGCCGTGCGGAT
GCGTCCGCGCACCCTCGACGAGGTCGTCGGCCAGCAGCACCTGCTCAAGCCCGGATCCCCCCTGCGCCGCCTGGTCGGCG
AGGGCGGCTCCGGGCCCGCCGGACCCTCCTCGGTCTTCCTCTGGGGCCCGCCCGGCACCGGCAAGACCACCCTGGCGTAC
GTCGTCTCCAAGGCCACCAACAAGCGCTTCGTGGAGCTGTCGGCCATCACCGCGGGCGTCAAGGAGGTCCGCGCGGTCAT
CGACGGCGCCCGCCGCGCGGTCGGGGGGTACGGCAAGGAGACCGTCCTCTTCCTCGACGAGATCCACCGCTTCAGCAAGG
CCCAGCAGGACTCCCTGCTCCCGGCCGTCGAGAACCGCTGGGTCACCCTGATCGCCGCCACCACCGAGAACCCGTACTTC
TCGGTGATCTCCCCGCTGCTCTCCCGCTCCCTCCTGCTCACCCTCGAACCCCTCACCGACGACGACGTGCGCGGCCTGCT
CCGCCGGGCCCTCGCCGCCGAGCGCGGACTGGGCGGGGCCGTCGCCCTGCCCGAGGACACCGAGGAGCACCTGCTGCGCA
TCGCGGGCGGTGACGCCCGCCGGGCCCTGACCGCGCTGGAGGCCGCCGCCGGGGCCGCCCTCGACAAGGGCGAGACGGAG
ATCGGCCTGACCACGCTGGAGGAGACGGTCGACCGGGCCGCGGTCAAGTACGACCGCGACGGCGACCAGCACTACGACGT
CGCCAGCGCCCTGATCAAGTCCATCCGCGGCTCCGACGTGGACGCCGCCCTGCACTACCTGGCCCGGATGATCGAGGCCG
GCGAGGACCCCCGCTTCATCGCGCGGCGCCTGATGATCTCCGCCAGCGAGGACATCGGCCTCGCCGACCCGAACGCGCTG
CCGATCGCCGTCGCCGCCGCCCAGGCCGTCGCCATGATCGGCTTCCCCGAGGCCGCCCTCACCCTCAGCCACGCCACCAT
CGCCCTCGCCCTCGCCCCCAAGTCCAACGCCGCCACCACCGCCATCGGCGCCGCCCTGGACGACGTGCGCAAGGGCCACG
CCGGACCGGTCCCCGCGCACCTGCGCGACAGCCACTACAAGGGCGCCGGCAAGCTCGGGCACGGGCAGGGGTACGTGTAC
CCGCACGACCTGCCGGAGGGCATCGCCGCCCAGCAGTACGCCCCGGACGAGCTGAAGGAGCGGACGTACTACACGCCGAC
CCGGCACGGCGCCGAGGCCCGGTACGCGGACGCGGTGGAGTGGACCCGCGGGCACCTCGGTCGCAAGCGGTCCTGA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (200-276)

• MgsA AAA+ ATPase C terminal (MgsA_C) (277-441)

• ATPase family associated with various cellular activities (AAA) (AAA) (65-169)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	44.111	96.009	0.424