Detailed information NTG0953302

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ACH6F1_RS08475
• Genome accession: NZ_CP172397
• Coordinates: 1631396..1632577 (+)
• Length: 393 a.a.
• NCBI ID: WP_220521853.1
• Uniprot ID: -
• Organism: Campylobacter coli strain YH506
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1626396..1637577

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACH6F1_RS08450 (ACH6F1_08435)	-	1627208..1628553 (-)	1346	Protein_1643	CitMHS family transporter	-
ACH6F1_RS08455 (ACH6F1_08440)	-	1628798..1629137 (+)	340	Protein_1644	DUF4878 domain-containing protein	-
ACH6F1_RS08460 (ACH6F1_08445)	-	1629121..1629693 (+)	573	WP_074470829.1	YiiX/YebB-like N1pC/P60 family cysteine hydrolase	-
ACH6F1_RS08465 (ACH6F1_08450)	-	1629792..1630145 (+)	354	WP_052785186.1	hypothetical protein	-
ACH6F1_RS08470 (ACH6F1_08455)	-	1630248..1631396 (+)	1149	WP_025399293.1	hypothetical protein	-
ACH6F1_RS08475 (ACH6F1_08460)	rarA	1631396..1632577 (+)	1182	WP_220521853.1	replication-associated recombination protein A	Machinery gene
ACH6F1_RS08480 (ACH6F1_08465)	dapB	1632640..1633368 (+)	729	WP_057036092.1	4-hydroxy-tetrahydrodipicolinate reductase	-
ACH6F1_RS08485 (ACH6F1_08470)	purF	1633370..1634707 (+)	1338	WP_395941560.1	amidophosphoribosyltransferase	-
ACH6F1_RS08490 (ACH6F1_08475)	-	1634711..1635524 (-)	814	Protein_1651	lysostaphin resistance A-like protein	-
ACH6F1_RS08495 (ACH6F1_08480)	-	1635862..1636433 (+)	572	Protein_1652	cytochrome C	-

Sequence

Protein

• Length: 393 a.a.
• Molecular weight: 44767.58 Da
• Isoelectric Point: 7.8209

>NTDB_id=953302 ACH6F1_RS08475 WP_220521853.1 1631396..1632577(+) (rarA) [Campylobacter coli strain YH506]
MSLALNFRPKTLDEILGQQELVEVFKKFISMQKLPHSLFFGPAGCGKTTFARVVAKDFGLDFYEFDGGNFKLEDLRKIIE
NYKNSLYKPLIFIDEIHRLSKTQQEMLLIPMENYRCIVIGASTENPYFVLSSGIRSRSMLFEFKNLGQKDLELLLERVQQ
KIVFKIEDNAKEFLLKSFDARAMLNLLEFALVLNEKEITLENLKKLRNGVNSEGVSSKDTHYILASALIKSLRGSDVDAA
IYYLARLIDAGESADFIARRLVIFSSEDIGNADPNALNLAVSTLEAVKNIGYPEARIILAQCVVYLASTIKSNASYKAIN
EALNYVKNNEALEIPNYLNNNHQEKQNYLYPHDFGGWVEQKYLSKNLKFYHSKGLGEEAKLLDNLYKLKNHKA

Nucleotide

• Length: 1182 bp

>NTDB_id=953302 ACH6F1_RS08475 WP_220521853.1 1631396..1632577(+) (rarA) [Campylobacter coli strain YH506]
ATGAGTTTAGCTTTAAATTTTCGTCCCAAAACCCTAGATGAAATTCTAGGCCAACAAGAACTTGTAGAAGTATTTAAAAA
ATTTATCAGTATGCAAAAACTTCCCCATAGTTTATTTTTTGGACCTGCAGGATGTGGAAAAACAACCTTTGCTAGAGTTG
TAGCTAAGGATTTTGGGCTTGATTTTTATGAATTTGATGGTGGAAATTTCAAACTTGAGGATTTAAGAAAAATCATAGAA
AATTACAAAAACAGCCTTTATAAACCTCTTATTTTTATCGATGAAATTCATCGCTTGAGTAAAACTCAACAAGAAATGCT
TTTAATTCCTATGGAAAATTATCGCTGCATTGTTATAGGTGCAAGTACTGAAAATCCTTATTTTGTTTTAAGTTCAGGCA
TTAGAAGTCGCTCTATGCTTTTTGAATTTAAAAATCTTGGGCAAAAAGATTTAGAACTTTTATTAGAGCGAGTGCAACAA
AAAATAGTATTTAAAATAGAAGATAATGCTAAAGAATTTTTACTAAAAAGCTTCGATGCTAGAGCAATGTTAAATTTACT
TGAATTTGCTTTGGTTTTAAATGAAAAAGAAATCACTTTAGAAAATTTAAAAAAACTTCGCAACGGAGTAAATAGCGAGG
GTGTAAGCTCAAAAGATACTCATTATATTTTAGCAAGTGCTCTTATTAAAAGTTTGCGCGGAAGTGACGTTGATGCAGCT
ATTTATTATCTTGCAAGACTTATTGATGCAGGAGAAAGTGCGGATTTTATCGCTAGGCGTTTGGTGATTTTTTCAAGTGA
AGATATCGGAAATGCCGATCCAAATGCTTTAAATTTAGCGGTTTCGACTCTAGAGGCTGTTAAAAATATAGGTTATCCTG
AAGCAAGAATTATCCTAGCCCAATGCGTAGTTTATTTAGCAAGCACAATCAAATCTAATGCAAGCTACAAAGCTATCAAT
GAAGCTTTAAACTATGTAAAAAATAATGAAGCTTTAGAAATACCTAATTATCTTAACAACAATCATCAAGAAAAACAAAA
CTATCTTTATCCACATGATTTTGGTGGCTGGGTAGAGCAAAAATATCTTAGTAAAAATTTAAAATTTTATCATAGCAAGG
GCTTAGGAGAAGAAGCAAAATTGTTAGATAATTTATATAAATTAAAAAACCATAAAGCTTAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (164-233)

• MgsA AAA+ ATPase C terminal (MgsA_C) (234-388)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-121)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	34.541	100	0.364