Detailed information NTG0953153

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: WHP30_RS05220
• Genome accession: NZ_CP148232
• Coordinates: 1006218..1006949 (+)
• Length: 243 a.a.
• NCBI ID: WP_002869050.1
• Uniprot ID: A0A5T0SGW6
• Organism: Campylobacter jejuni strain Z1323CCJ0028
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1001218..1011949

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WHP30_RS05190 (WHP30_05190)	rpsF	1001364..1001738 (+)	375	WP_002890070.1	30S ribosomal protein S6	-
WHP30_RS05195 (WHP30_05195)	ssb	1001750..1002298 (+)	549	WP_002890071.1	single-stranded DNA-binding protein	-
WHP30_RS05200 (WHP30_05200)	rpsR	1002309..1002569 (+)	261	WP_002853032.1	30S ribosomal protein S18	-
WHP30_RS05205 (WHP30_05205)	lon	1002629..1005004 (-)	2376	WP_002853487.1	endopeptidase La	-
WHP30_RS05210 (WHP30_05210)	-	1005021..1005668 (-)	648	WP_002852961.1	outer membrane protein assembly factor BamD	-
WHP30_RS05215 (WHP30_05215)	fliW	1005829..1006218 (+)	390	WP_002852982.1	flagellar assembly protein FliW	-
WHP30_RS05220 (WHP30_05220)	proC	1006218..1006949 (+)	732	WP_002869050.1	pyrroline-5-carboxylate reductase	Machinery gene
WHP30_RS05225 (WHP30_05225)	ctsT	1006946..1007248 (+)	303	WP_002855822.1	transformation system protein	Machinery gene
WHP30_RS05230 (WHP30_05230)	-	1007245..1007907 (+)	663	WP_002866103.1	hypothetical protein	-
WHP30_RS05235 (WHP30_05235)	-	1007904..1008356 (+)	453	WP_002869049.1	hypothetical protein	-
WHP30_RS05240 (WHP30_05240)	hemD	1008353..1008982 (-)	630	WP_002856298.1	uroporphyrinogen-III synthase	-
WHP30_RS05245 (WHP30_05245)	thiE	1008960..1009592 (-)	633	WP_002856400.1	thiamine phosphate synthase	-
WHP30_RS05250 (WHP30_05250)	thiD	1009582..1010394 (-)	813	WP_002869047.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
WHP30_RS05255 (WHP30_05255)	-	1010391..1011077 (-)	687	WP_002869046.1	3-methyladenine DNA glycosylase	-
WHP30_RS05260 (WHP30_05260)	-	1011074..1011835 (-)	762	WP_002856328.1	ATP-binding protein	-

Sequence

Protein

• Length: 243 a.a.
• Molecular weight: 26543.96 Da
• Isoelectric Point: 8.5934

>NTDB_id=953153 WHP30_RS05220 WP_002869050.1 1006218..1006949(+) (proC) [Campylobacter jejuni strain Z1323CCJ0028]
MLYILANGAMATALAYGLKDDYEICIVGRSIEKLQALAKEGFKTLLYKDFNIEGKDVILAFKPYALENIAQMLKGQARIL
ISVLANVDFEKLQTIKAQNYVRIIPNTAAKYKASTTPYILKNSHFENEILDILKTFGSAYKLDNEIQMNAAMAISGCAPA
FLALIAESIANAGVYEGLSKELSLNLTRSLFKSSSALLEHEHPAIIKENICSPGGVTIKGIKILEQKGIRGSFFEAINAS
SAK

Nucleotide

• Length: 732 bp

>NTDB_id=953153 WHP30_RS05220 WP_002869050.1 1006218..1006949(+) (proC) [Campylobacter jejuni strain Z1323CCJ0028]
ATGCTCTATATACTTGCAAATGGAGCTATGGCAACAGCCTTAGCCTATGGATTAAAAGATGATTATGAAATTTGCATAGT
AGGAAGAAGTATAGAAAAACTTCAAGCCCTCGCCAAAGAAGGCTTTAAAACCTTACTTTACAAAGATTTTAACATAGAAG
GTAAAGATGTTATTTTAGCATTTAAACCTTATGCTTTAGAAAATATTGCTCAAATGCTAAAAGGACAAGCACGTATCTTA
ATCTCTGTTTTAGCCAATGTTGATTTTGAAAAACTACAAACCATCAAAGCTCAAAATTATGTTAGAATAATACCCAATAC
AGCAGCTAAATACAAGGCTTCAACCACACCATATATACTTAAAAACTCTCATTTTGAAAATGAAATTTTAGACATTTTAA
AAACTTTTGGCTCAGCTTATAAATTAGATAATGAAATACAAATGAATGCAGCTATGGCGATTAGCGGCTGCGCTCCTGCT
TTTTTAGCACTTATAGCAGAAAGCATTGCTAATGCTGGAGTTTATGAAGGTTTGTCAAAAGAACTTAGTCTCAATCTTAC
GCGCTCTTTATTTAAAAGCTCTAGTGCTTTACTAGAACATGAACATCCAGCTATTATCAAAGAAAATATTTGCTCCCCTG
GCGGAGTTACAATAAAAGGCATAAAAATACTCGAACAAAAAGGAATTCGCGGAAGTTTTTTTGAAGCCATAAATGCTAGC
AGCGCTAAATGA

Domains

Predicted by InterproScan.

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (145-242)

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (4-85)

3D structure

• AlphaFold DB: A0A5T0SGW6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	100	100	1