Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   WHP40_RS03690 Genome accession   NZ_CP148223
Coordinates   701820..703004 (+) Length   394 a.a.
NCBI ID   WP_002857981.1    Uniprot ID   Q0P8K1
Organism   Campylobacter jejuni strain Z1323CCJ0045     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 696820..708004
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHP40_RS03670 (WHP40_03670) - 697890..698492 (+) 603 WP_002858074.1 gamma-glutamyl-CDP-amidate hydrolase -
  WHP40_RS03675 (WHP40_03675) - 698494..699255 (+) 762 WP_002858404.1 CTP:phosphoglutamine cytidylyltransferase -
  WHP40_RS03680 (WHP40_03680) cysC 699245..699757 (+) 513 WP_002858462.1 cytidine diphosphoramidate kinase -
  WHP40_RS03685 (WHP40_03685) kpsC 699754..701823 (+) 2070 WP_002857891.1 capsular polysaccharide biosynthesis protein -
  WHP40_RS03690 (WHP40_03690) kpsS 701820..703004 (+) 1185 WP_002857981.1 capsule polysaccharide modification protein KpsS Regulator
  WHP40_RS03695 (WHP40_03695) - 703077..704198 (+) 1122 WP_002858304.1 membrane protein -
  WHP40_RS03700 (WHP40_03700) - 704195..705556 (+) 1362 WP_002855307.1 cytochrome P450 -
  WHP40_RS03705 (WHP40_03705) - 705553..705972 (+) 420 WP_002855518.1 hypothetical protein -
  WHP40_RS03710 (WHP40_03710) acpS 705973..706320 (-) 348 WP_002825806.1 holo-ACP synthase -
  WHP40_RS03715 (WHP40_03715) fliL 706320..706856 (-) 537 WP_002855429.1 flagellar basal body-associated protein FliL -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46938.68 Da        Isoelectric Point: 9.9831

>NTDB_id=952991 WHP40_RS03690 WP_002857981.1 701820..703004(+) (kpsS) [Campylobacter jejuni strain Z1323CCJ0045]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAVKMRKNQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQNKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYFKLINDLSRKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYNFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=952991 WHP40_RS03690 WP_002857981.1 701820..703004(+) (kpsS) [Campylobacter jejuni strain Z1323CCJ0045]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGGCCTGTGGGAAATTTTTT
TCATCATCTTGCAGTGAAAATGAGAAAAAACCAAACCAAAGTTTTTAAACTCAATTTTAACGGCGGAGATTTTTTTTTCT
ATCCTAGCGGAACGAGGTGTAAGTGTGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAATAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGCATTATACATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGCTATAAGAATTATTTTAAACTTATAAATGATTTAAGTCGAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTGGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATAATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTGGTATGTAATTTTAAGA
AATATCTTTTACAAACTAATCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q0P8K1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

100

100

1