Detailed information
Bioinformatically predicted
Overview
| Name | CJE0566 | Type | Regulator |
| Locus tag | WHP72_RS02510 | Genome accession | NZ_CP148184 |
| Coordinates | 470324..470974 (-) | Length | 216 a.a. |
| NCBI ID | WP_032593192.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain Z1323CCJ0088 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 459328..488951 | 470324..470974 | within | 0 |
Gene organization within MGE regions
Location: 459328..488951
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHP72_RS02410 (WHP72_02410) | - | 459328..460530 (+) | 1203 | WP_032593176.1 | site-specific integrase | - |
| WHP72_RS02415 (WHP72_02415) | - | 460527..460697 (-) | 171 | WP_002864902.1 | helix-turn-helix domain-containing protein | - |
| WHP72_RS02420 (WHP72_02420) | - | 460690..461232 (-) | 543 | WP_032593178.1 | pentapeptide repeat-containing protein | - |
| WHP72_RS02425 (WHP72_02425) | - | 461220..461426 (-) | 207 | WP_032593181.1 | hypothetical protein | - |
| WHP72_RS02430 (WHP72_02430) | - | 461423..462109 (-) | 687 | WP_032593184.1 | hypothetical protein | - |
| WHP72_RS02435 (WHP72_02435) | - | 462112..462531 (-) | 420 | WP_032593187.1 | YopX family protein | - |
| WHP72_RS02440 (WHP72_02440) | - | 462564..463136 (-) | 573 | WP_338877913.1 | antA/AntB antirepressor family protein | - |
| WHP72_RS02445 (WHP72_02445) | - | 463324..463587 (-) | 264 | WP_011049695.1 | hypothetical protein | - |
| WHP72_RS02450 (WHP72_02450) | - | 463568..464263 (-) | 696 | WP_011049696.1 | hypothetical protein | - |
| WHP72_RS02455 (WHP72_02455) | - | 464263..465000 (-) | 738 | WP_002873576.1 | hypothetical protein | - |
| WHP72_RS02460 (WHP72_02460) | - | 465002..465856 (-) | 855 | WP_338877890.1 | YqaJ viral recombinase family protein | - |
| WHP72_RS02465 (WHP72_02465) | - | 465846..466589 (-) | 744 | WP_002795992.1 | phage regulatory protein/antirepressor Ant | - |
| WHP72_RS02470 (WHP72_02470) | - | 466586..466768 (-) | 183 | WP_002795990.1 | hypothetical protein | - |
| WHP72_RS02475 (WHP72_02475) | - | 466912..467109 (+) | 198 | WP_002795988.1 | hypothetical protein | - |
| WHP72_RS02480 (WHP72_02480) | - | 467102..467254 (-) | 153 | WP_002795985.1 | hypothetical protein | - |
| WHP72_RS02485 (WHP72_02485) | - | 467251..467505 (-) | 255 | WP_002795984.1 | hypothetical protein | - |
| WHP72_RS02490 (WHP72_02490) | - | 467496..467765 (-) | 270 | WP_002874357.1 | hypothetical protein | - |
| WHP72_RS02495 (WHP72_02495) | - | 468326..468598 (-) | 273 | WP_032593190.1 | hypothetical protein | - |
| WHP72_RS02500 (WHP72_02500) | - | 468742..469473 (+) | 732 | WP_002861653.1 | hypothetical protein | - |
| WHP72_RS02505 (WHP72_02505) | - | 469507..470331 (-) | 825 | WP_002874362.1 | hypothetical protein | - |
| WHP72_RS02510 (WHP72_02510) | CJE0566 | 470324..470974 (-) | 651 | WP_032593192.1 | DNA/RNA non-specific endonuclease | Regulator |
| WHP72_RS02515 (WHP72_02515) | - | 470990..471487 (-) | 498 | WP_032593193.1 | hypothetical protein | - |
| WHP72_RS02520 (WHP72_02520) | - | 471480..472685 (-) | 1206 | WP_032593196.1 | AAA family ATPase | - |
| WHP72_RS02525 (WHP72_02525) | - | 472788..473522 (-) | 735 | WP_032593197.1 | S24 family peptidase | - |
| WHP72_RS02530 (WHP72_02530) | - | 473634..473852 (+) | 219 | WP_002826741.1 | hypothetical protein | - |
| WHP72_RS02535 (WHP72_02535) | - | 473849..474283 (+) | 435 | WP_002826742.1 | hypothetical protein | - |
| WHP72_RS02540 (WHP72_02540) | - | 474280..474657 (+) | 378 | WP_002826744.1 | hypothetical protein | - |
| WHP72_RS02545 (WHP72_02545) | - | 474654..475655 (+) | 1002 | WP_032593200.1 | hypothetical protein | - |
| WHP72_RS02550 (WHP72_02550) | - | 475666..476316 (+) | 651 | WP_338877891.1 | hypothetical protein | - |
| WHP72_RS02555 (WHP72_02555) | - | 476334..476714 (+) | 381 | WP_002788333.1 | hypothetical protein | - |
| WHP72_RS02560 (WHP72_02560) | - | 476714..477100 (+) | 387 | WP_002861661.1 | terminase small subunit | - |
| WHP72_RS02565 (WHP72_02565) | - | 477097..478389 (+) | 1293 | WP_032593205.1 | terminase | - |
| WHP72_RS02570 (WHP72_02570) | - | 478379..478651 (+) | 273 | WP_002781524.1 | hypothetical protein | - |
| WHP72_RS02575 (WHP72_02575) | - | 478632..480170 (+) | 1539 | WP_032593207.1 | hypothetical protein | - |
| WHP72_RS02580 (WHP72_02580) | - | 480163..480366 (+) | 204 | WP_002875072.1 | hypothetical protein | - |
| WHP72_RS02585 (WHP72_02585) | - | 480356..481003 (+) | 648 | WP_002875073.1 | hypothetical protein | - |
| WHP72_RS02590 (WHP72_02590) | - | 481014..481394 (+) | 381 | WP_032593208.1 | hypothetical protein | - |
| WHP72_RS02595 (WHP72_02595) | - | 481659..482801 (+) | 1143 | WP_338877892.1 | hypothetical protein | - |
| WHP72_RS02600 (WHP72_02600) | - | 482798..485977 (+) | 3180 | WP_338877893.1 | hypothetical protein | - |
| WHP72_RS02605 (WHP72_02605) | - | 486172..486798 (+) | 627 | WP_052790070.1 | hypothetical protein | - |
| WHP72_RS02610 (WHP72_02610) | - | 486942..487583 (+) | 642 | WP_134162987.1 | antA/AntB antirepressor family protein | - |
| WHP72_RS02615 (WHP72_02615) | - | 487917..488951 (+) | 1035 | WP_052840117.1 | DUF5309 family protein | - |
Sequence
Protein
Download Length: 216 a.a. Molecular weight: 25364.97 Da Isoelectric Point: 9.9933
>NTDB_id=952412 WHP72_RS02510 WP_032593192.1 470324..470974(-) (CJE0566) [Campylobacter jejuni strain Z1323CCJ0088]
MKKLIILSLLTTLALADYNQYKPSEDFAKHFTKQNCSQVLDKFYYLNCYDYNLKGTKAVAYKLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTISNASMRKTTQAQRSTFLMSNITPQNPQINQKVWNKIEKRERQVALKLGEIEVL
NLVNYDSNPQRIRNQIAIPSSYIKIIKGNNFKECYKVPNYEVDNLSIKRYKFNCDG
MKKLIILSLLTTLALADYNQYKPSEDFAKHFTKQNCSQVLDKFYYLNCYDYNLKGTKAVAYKLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTISNASMRKTTQAQRSTFLMSNITPQNPQINQKVWNKIEKRERQVALKLGEIEVL
NLVNYDSNPQRIRNQIAIPSSYIKIIKGNNFKECYKVPNYEVDNLSIKRYKFNCDG
Nucleotide
Download Length: 651 bp
>NTDB_id=952412 WHP72_RS02510 WP_032593192.1 470324..470974(-) (CJE0566) [Campylobacter jejuni strain Z1323CCJ0088]
ATGAAAAAACTTATAATCTTATCATTATTGACAACTCTAGCCTTAGCTGATTATAACCAATACAAACCAAGTGAAGATTT
TGCTAAGCATTTTACTAAGCAAAACTGCTCACAAGTTTTGGATAAGTTTTATTATCTAAATTGTTATGATTATAATCTTA
AAGGCACTAAAGCTGTAGCTTATAAACTAGAAGCAGATAATCTAAAAGGCGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATACCTAAAAAATACCGCACCACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGGCATACTAT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCCCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCGCAAAATCCAC
AAATTAATCAAAAAGTATGGAATAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAGCTTGGAGAAATTGAAGTTTTA
AATTTGGTTAATTATGATAGCAACCCTCAAAGAATAAGAAATCAAATTGCTATTCCAAGCTCTTATATCAAGATTATAAA
AGGTAATAATTTTAAAGAATGCTATAAAGTTCCAAATTATGAAGTCGATAATTTAAGTATAAAAAGATATAAGTTTAATT
GTGATGGATAA
ATGAAAAAACTTATAATCTTATCATTATTGACAACTCTAGCCTTAGCTGATTATAACCAATACAAACCAAGTGAAGATTT
TGCTAAGCATTTTACTAAGCAAAACTGCTCACAAGTTTTGGATAAGTTTTATTATCTAAATTGTTATGATTATAATCTTA
AAGGCACTAAAGCTGTAGCTTATAAACTAGAAGCAGATAATCTAAAAGGCGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATACCTAAAAAATACCGCACCACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGGCATACTAT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCCCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCGCAAAATCCAC
AAATTAATCAAAAAGTATGGAATAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAGCTTGGAGAAATTGAAGTTTTA
AATTTGGTTAATTATGATAGCAACCCTCAAAGAATAAGAAATCAAATTGCTATTCCAAGCTCTTATATCAAGATTATAAA
AGGTAATAATTTTAAAGAATGCTATAAAGTTCCAAATTATGAAGTCGATAATTTAAGTATAAAAAGATATAAGTTTAATT
GTGATGGATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| CJE0566 | Campylobacter jejuni RM1221 |
87.442 |
99.537 |
0.87 |
| CJE1441 | Campylobacter jejuni RM1221 |
86.977 |
99.537 |
0.866 |