Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHQ40_RS05865 | Genome accession | NZ_CP148183 |
| Coordinates | 1111894..1112196 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain Z1323CCJ0091 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1106894..1117196
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHQ40_RS05840 (WHQ40_05840) | rpsR | 1107257..1107517 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| WHQ40_RS05845 (WHQ40_05845) | lon | 1107577..1109952 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| WHQ40_RS05850 (WHQ40_05850) | - | 1109969..1110616 (-) | 648 | WP_011049880.1 | outer membrane protein assembly factor BamD | - |
| WHQ40_RS05855 (WHQ40_05855) | fliW | 1110777..1111166 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHQ40_RS05860 (WHQ40_05860) | proC | 1111166..1111897 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHQ40_RS05865 (WHQ40_05865) | ctsT | 1111894..1112196 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| WHQ40_RS05870 (WHQ40_05870) | - | 1112193..1112856 (+) | 664 | Protein_1136 | hypothetical protein | - |
| WHQ40_RS05875 (WHQ40_05875) | - | 1112853..1113305 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| WHQ40_RS05880 (WHQ40_05880) | hemD | 1113302..1113931 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| WHQ40_RS05885 (WHQ40_05885) | thiE | 1113909..1114541 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| WHQ40_RS05890 (WHQ40_05890) | thiD | 1114531..1115343 (-) | 813 | WP_002867189.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHQ40_RS05895 (WHQ40_05895) | - | 1115340..1116026 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| WHQ40_RS05900 (WHQ40_05900) | - | 1116023..1116784 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=952391 WHQ40_RS05865 WP_002853046.1 1111894..1112196(+) (ctsT) [Campylobacter jejuni strain Z1323CCJ0091]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=952391 WHQ40_RS05865 WP_002853046.1 1111894..1112196(+) (ctsT) [Campylobacter jejuni strain Z1323CCJ0091]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |